| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_021783 |
Definition |
Salmonella phage iEPS5, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chivirus. |
DB of origin |
REFSEQ |
Length |
59254 |
Host Name |
Salmonella enterica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
73 |
%GC |
56.3 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008240233.1 | NC_021783_p2 | hypothetical protein | phrog_7646 | unknown function | unknown function | -1 | 795 | 1046 |
| YP_008240301.1 | NC_021783_p70 | hypothetical protein | phrog_7721 | unknown function | unknown function | -1 | 54731 | 55147 |
| YP_008240243.1 | NC_021783_p12 | hypothetical protein | phrog_6647 | unknown function | unknown function | 1 | 5993 | 6364 |
| YP_008240284.1 | NC_021783_p53 | hypothetical protein | phrog_5078 | tail terminator | connector | -1 | 39207 | 39710 |
| YP_008240293.1 | NC_021783_p62 | terminase large subunit | phrog_15 | terminase large subunit | head and packaging | -1 | 45821 | 47896 |
| YP_008240240.1 | NC_021783_p9 | hypothetical protein | phrog_2385 | unknown function | unknown function | -1 | 4202 | 4402 |
| YP_008240277.1 | NC_021783_p46 | tail assembly protein 1 | phrog_1180 | tail assembly chaperone | tail | -1 | 30202 | 30432 |
| YP_008240270.1 | NC_021783_p39 | hypothetical protein | phrog_10924 | unknown function | unknown function | -1 | 21079 | 22305 |
| YP_008240259.1 | NC_021783_p28 | hypothetical protein | phrog_3012 | unknown function | unknown function | 1 | 14801 | 15082 |
| YP_008240254.1 | NC_021783_p23 | hypothetical protein | phrog_8209 | unknown function | unknown function | 1 | 12585 | 13559 |
| YP_008240247.1 | NC_021783_p16 | recombination-associated protein RdgC | phrog_724 | exonuclease recombination-associated | DNA, RNA and nucleotide metabolism | 1 | 7507 | 8583 |
| YP_008240287.1 | NC_021783_p56 | hypothetical protein | phrog_7559 | unknown function | unknown function | -1 | 40701 | 40994 |
| YP_008240297.1 | NC_021783_p66 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 50253 | 52292 |
| YP_008240292.1 | NC_021783_p61 | head-to-tail joining protein W | phrog_75 | head-tail adaptor Ad1 | connector | -1 | 45556 | 45810 |
| YP_008240238.1 | NC_021783_p7 | hypothetical protein | phrog_7744 | unknown function | unknown function | -1 | 3361 | 3564 |
| YP_008240263.1 | NC_021783_p32 | hypothetical protein | phrog_18367 | unknown function | unknown function | 1 | 16630 | 16914 |
| YP_008240237.1 | NC_021783_p6 | hypothetical protein | phrog_9514 | unknown function | unknown function | -1 | 2802 | 3350 |
| YP_008240232.1 | NC_021783_p1 | hypothetical protein | phrog_8116 | unknown function | unknown function | -1 | 551 | 802 |
| YP_008240236.1 | NC_021783_p5 | hypothetical protein | phrog_8635 | unknown function | unknown function | -1 | 2584 | 2805 |
| YP_008240278.1 | NC_021783_p47 | tail assembly protein 2 | phrog_778 | tail assembly protein | tail | -1 | 30444 | 31262 |
| YP_008240258.1 | NC_021783_p27 | hypothetical protein | phrog_9072 | thymidylate synthase complementing protein | DNA, RNA and nucleotide metabolism | 1 | 14208 | 14720 |
| YP_008240300.1 | NC_021783_p69 | hypothetical protein | phrog_8318 | unknown function | unknown function | -1 | 54340 | 54765 |
| YP_008240279.1 | NC_021783_p48 | hypothetical protein | phrog_1082 | tail assembly protein | tail | -1 | 31272 | 32960 |
| YP_008240260.1 | NC_021783_p29 | hypothetical protein | phrog_9301 | unknown function | unknown function | 1 | 15079 | 15390 |
| YP_008240295.1 | NC_021783_p64 | SNF2 domain-containing protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 48442 | 49917 |
| YP_008240251.1 | NC_021783_p20 | hypothetical protein | phrog_8641 | unknown function | unknown function | 1 | 10032 | 10706 |
| YP_008240282.1 | NC_021783_p51 | hypothetical protein | phrog_5260 | tail protein | tail | -1 | 37496 | 37957 |
| YP_008240283.1 | NC_021783_p52 | bacterial Ig-like domain-containing protein | phrog_807 | major tail protein with Ig-like domain | tail | -1 | 38054 | 39193 |
| YP_008240299.1 | NC_021783_p68 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 53010 | 54347 |
| YP_008240296.1 | NC_021783_p65 | VRR-NUC domain-containing protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 49964 | 50251 |
| YP_008240275.1 | NC_021783_p44 | hypothetical protein | phrog_6284 | tail protein | tail | -1 | 26083 | 29973 |
| YP_008240261.1 | NC_021783_p30 | hypothetical protein | phrog_8264 | unknown function | unknown function | 1 | 15387 | 15839 |
| YP_008240250.1 | NC_021783_p19 | hypothetical protein | phrog_6886 | unknown function | unknown function | 1 | 9295 | 10035 |
| YP_008240289.1 | NC_021783_p58 | decorator protein D | phrog_49 | head decoration | head and packaging | -1 | 42133 | 42552 |
| YP_008240245.1 | NC_021783_p14 | hypothetical protein | phrog_7734 | unknown function | unknown function | 1 | 6863 | 7198 |
| YP_008240281.1 | NC_021783_p50 | hypothetical protein | phrog_9221 | tail length tape measure protein | tail | -1 | 37254 | 37451 |
| YP_008240276.1 | NC_021783_p45 | hypothetical protein | phrog_1196 | tail assembly chaperone | tail | -1 | 29963 | 30202 |
| YP_008240248.1 | NC_021783_p17 | hypothetical protein | phrog_7200 | unknown function | unknown function | 1 | 8586 | 8819 |
| YP_008240294.1 | NC_021783_p63 | terminase small subunit | phrog_141 | terminase small subunit | head and packaging | -1 | 47886 | 48455 |
| YP_008240286.1 | NC_021783_p55 | hypothetical protein | phrog_4858 | unknown function | unknown function | -1 | 40333 | 40698 |
| YP_008240290.1 | NC_021783_p59 | prohead protease ClpP | phrog_53 | head maturation protease | head and packaging | -1 | 42567 | 43853 |
| YP_008240257.1 | NC_021783_p26 | hypothetical protein | phrog_9722 | unknown function | unknown function | 1 | 13972 | 14226 |
| YP_008240255.1 | NC_021783_p24 | hypothetical protein | phrog_9067 | unknown function | unknown function | 1 | 13570 | 13764 |
| YP_008240280.1 | NC_021783_p49 | tape measure protein | phrog_2335 | tail length tape measure protein | tail | -1 | 32966 | 37261 |
| YP_008240264.1 | NC_021783_p33 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 16911 | 17372 |
| YP_008240271.1 | NC_021783_p40 | hypothetical protein | phrog_2448 | unknown function | unknown function | -1 | 22320 | 23339 |
| YP_008240302.1 | NC_021783_p71 | hypothetical protein | phrog_7401 | unknown function | unknown function | 1 | 55444 | 55671 |
| YP_008240274.1 | NC_021783_p43 | hypothetical protein | phrog_7049 | tail fiber protein | tail | -1 | 25343 | 26083 |
| YP_008240239.1 | NC_021783_p8 | hypothetical protein | phrog_10310 | unknown function | unknown function | -1 | 3576 | 4199 |
| YP_008240242.1 | NC_021783_p11 | hypothetical protein | phrog_4445 | unknown function | unknown function | -1 | 4975 | 5232 |
| YP_008240249.1 | NC_021783_p18 | hypothetical protein | phrog_7587 | unknown function | unknown function | 1 | 8824 | 9099 |
| YP_008240235.1 | NC_021783_p4 | hypothetical protein | phrog_10087 | unknown function | unknown function | -1 | 1298 | 2458 |
| YP_008240268.1 | NC_021783_p37 | lysis protein B | phrog_7686 | Rz-like spanin | lysis | -1 | 18471 | 18809 |
| YP_008240266.1 | NC_021783_p35 | hypothetical protein | phrog_15395 | tail protein | tail | 1 | 17578 | 17748 |
| YP_008240234.1 | NC_021783_p3 | hypothetical protein | phrog_8059 | unknown function | unknown function | -1 | 1039 | 1245 |
| YP_008240262.1 | NC_021783_p31 | hypothetical protein | phrog_8098 | unknown function | unknown function | 1 | 15841 | 16554 |
| YP_008240304.1 | NC_021783_p73 | HTH domain-containing protein | phrog_2339 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 58289 | 58612 |
| YP_008240291.1 | NC_021783_p60 | lambda family portal protein B | phrog_21 | portal protein | head and packaging | -1 | 43880 | 45559 |
| YP_008240269.1 | NC_021783_p38 | hypothetical protein | phrog_7226 | unknown function | unknown function | -1 | 18874 | 21069 |
| YP_008240285.1 | NC_021783_p54 | hypothetical protein | phrog_27 | tail completion or Neck1 protein | connector | -1 | 39707 | 40333 |
| YP_008240267.1 | NC_021783_p36 | lysis protein A | phrog_873 | endolysin | head and packaging | -1 | 17754 | 18467 |
| YP_008240252.1 | NC_021783_p21 | hypothetical protein | phrog_8386 | unknown function | unknown function | 1 | 10703 | 11803 |
| YP_008240244.1 | NC_021783_p13 | hypothetical protein | phrog_7942 | unknown function | unknown function | 1 | 6436 | 6876 |
| YP_008240265.1 | NC_021783_p34 | hypothetical protein | phrog_1275 | Rz-like spanin | lysis | -1 | 17373 | 17576 |
| YP_008240273.1 | NC_021783_p42 | hypothetical protein | phrog_2448 | unknown function | unknown function | -1 | 24326 | 25333 |
| YP_008240288.1 | NC_021783_p57 | major capsid protein E | phrog_29 | major head protein | head and packaging | -1 | 41056 | 42120 |
| YP_008240272.1 | NC_021783_p41 | hypothetical protein | phrog_2448 | unknown function | unknown function | -1 | 23353 | 24315 |
| YP_008240303.1 | NC_021783_p72 | primase | phrog_1156 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 55668 | 58253 |
| YP_008240256.1 | NC_021783_p25 | hypothetical protein | phrog_8705 | unknown function | unknown function | 1 | 13767 | 13982 |
| YP_008240246.1 | NC_021783_p15 | hypothetical protein | phrog_7965 | unknown function | unknown function | 1 | 7185 | 7526 |
| YP_008240241.1 | NC_021783_p10 | hypothetical protein | phrog_3199 | unknown function | unknown function | -1 | 4417 | 4956 |
| YP_008240253.1 | NC_021783_p22 | N-6-adenine-methyltransferase | phrog_111 | DNA methyltransferase | other | 1 | 11803 | 12507 |
| YP_008240298.1 | NC_021783_p67 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 52359 | 52955 |