Genomic map of Thermus phage phi OH2 (NC_021784)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021784
Definition
Phage phi OH2 DNA, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
DB of origin
REFSEQ
Length
38099
Host Name
Thermus thermophilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
60
%GC
44.68
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008240359.1 NC_021784_p55 immunity repressor protein (phage-like protein) phrog_8 transcriptional regulator transcription regulation 1 34527 34994
YP_008240357.1 NC_021784_p53 prophage antirepressor phrog_130 anti-repressor Ant transcription regulation -1 33363 34118
YP_008240335.1 NC_021784_p31 predicted amidophosphoribosyltransferase phrog_16932 unknown function unknown function -1 20942 22147
YP_008240338.1 NC_021784_p34 RecA/RadA recombinase phrog_20919 recombinase other -1 24057 24266
YP_008240321.1 NC_021784_p17 hypothetical protein phrog_966 unknown function unknown function -1 12511 12693
YP_008240317.1 NC_021784_p13 phage tape measure protein phrog_1068 tail length tape measure protein tail -1 7875 10133
YP_008240348.1 NC_021784_p44 hypothetical protein phrog_5984 unknown function unknown function -1 29832 30017
YP_008240312.1 NC_021784_p8 baseplate J phrog_6 baseplate wedge subunit tail -1 4538 5578
YP_008240322.1 NC_021784_p18 hypothetical protein phrog_525 unknown function unknown function -1 12677 13084
YP_008240363.1 NC_021784_p59 hypothetical protein phrog_15228 unknown function unknown function 1 36694 36867
YP_008240358.1 NC_021784_p54 predicted transcriptional regulator phrog_3642 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 34090 34362
YP_008240307.1 NC_021784_p3 phage-related holin phrog_199 holin lysis -1 1491 1910
YP_008240362.1 NC_021784_p58 ATPase related to the helicase subunit of the Holliday junction resolvase phrog_23021 ATPase other -1 36299 36520
YP_008240325.1 NC_021784_p21 hypothetical protein phrog_132 head-tail adaptor connector -1 13839 14180
YP_008240356.1 NC_021784_p52 hypothetical protein phrog_3882 unknown function unknown function -1 33200 33349
YP_008240306.1 NC_021784_p2 bacteriophage SPbeta N-acetylmuramoyl-L-alanine amidase phrog_9611 endolysin lysis -1 826 1494
YP_008240355.1 NC_021784_p51 hypothetical protein phrog_2211 unknown function unknown function 1 32894 33211
YP_008240341.1 NC_021784_p37 hypothetical protein phrog_23240 unknown function unknown function -1 25865 26077
YP_008240351.1 NC_021784_p47 hypothetical protein phrog_3910 transcriptional regulator transcription regulation -1 31260 31598
YP_008240324.1 NC_021784_p20 hypothetical protein phrog_615 head-tail adaptor connector -1 13472 13837
YP_008240328.1 NC_021784_p24 methyl-accepting chemotaxis protein scaffolding protein phrog_194 head scaffolding protein head and packaging -1 15179 15736
YP_008240346.1 NC_021784_p42 XkdB protein phrog_7498 DnaD-like helicase loader DNA, RNA and nucleotide metabolism -1 27875 28795
YP_008240313.1 NC_021784_p9 hypothetical protein phrog_120 baseplate wedge subunit tail -1 5571 5984
YP_008240344.1 NC_021784_p40 hypothetical protein phrog_3407 unknown function unknown function -1 26866 27087
YP_008240334.1 NC_021784_p30 ABC-type proline/glycine betaine transport system, ATPase component phrog_23181 ATPase other -1 20657 20869
YP_008240347.1 NC_021784_p43 RecT protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 28971 29816
YP_008240330.1 NC_021784_p26 SPP1 family phage head morphogenesis protein phrog_115 minor head protein head and packaging -1 16059 17516
YP_008240318.1 NC_021784_p14 hypothetical protein phrog_389 tail protein XkdN-like tail -1 10317 10718
YP_008240305.1 NC_021784_p1 small-conductance mechanosensitive channel phrog_20920 unknown function unknown function -1 355 702
YP_008240332.1 NC_021784_p28 terminase large subunit phrog_2 terminase large subunit head and packaging -1 18947 20209
YP_008240360.1 NC_021784_p56 predicted Zn peptidase phrog_87 metallo-protease other 1 35015 35455
YP_008240340.1 NC_021784_p36 endodeoxyribonuclease RusA phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 25198 25617
YP_008240350.1 NC_021784_p46 hypothetical protein phrog_4331 unknown function unknown function -1 31063 31263
YP_008240352.1 NC_021784_p48 hypothetical protein phrog_6048 unknown function unknown function -1 31948 32211
YP_008240336.1 NC_021784_p32 SMF family protein phrog_38708 unknown function unknown function -1 22176 23408
YP_008240310.1 NC_021784_p6 hypothetical protein phrog_28171 unknown function unknown function -1 2517 3947
YP_008240333.1 NC_021784_p29 terminase small subunit phrog_51 terminase small subunit head and packaging -1 20196 20636
YP_008240323.1 NC_021784_p19 hypothetical protein phrog_5 tail completion or Neck1 protein connector -1 13074 13472
YP_008240320.1 NC_021784_p16 sheath tail protein phrog_279 tail sheath tail -1 11213 12511
YP_008240331.1 NC_021784_p27 phage portal protein, SPP1 phrog_64 portal protein head and packaging -1 17509 18933
YP_008240349.1 NC_021784_p45 phage-type endonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism -1 30018 30953
YP_008240342.1 NC_021784_p38 DUTPase phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 26067 26576
YP_008240329.1 NC_021784_p25 hypothetical protein phrog_1865 unknown function unknown function -1 15868 16062
YP_008240308.1 NC_021784_p4 hypothetical protein phrog_5056 unknown function unknown function -1 1996 2130
YP_008240345.1 NC_021784_p41 IstB domain-containing protein ATP-binding protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism -1 27091 27933
YP_008240326.1 NC_021784_p22 hypothetical protein phrog_37956 unknown function unknown function -1 14183 14326
YP_008240314.1 NC_021784_p10 hypothetical protein phrog_579 unknown function unknown function -1 5984 6241
YP_008240311.1 NC_021784_p7 hypothetical protein phrog_521 tail protein tail -1 3953 4537
YP_008240354.1 NC_021784_p50 hypothetical protein phrog_668 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 32503 32811
YP_008240361.1 NC_021784_p57 hypothetical protein phrog_15646 unknown function unknown function 1 35456 36307
YP_008240337.1 NC_021784_p33 phage transcriptional regulator, ArpU phrog_248 transcriptional activator transcription regulation -1 23526 23978
YP_008240343.1 NC_021784_p39 hypothetical protein phrog_14865 unknown function unknown function -1 26715 26891
YP_008240339.1 NC_021784_p35 predicted xylanase/chitin deacetylase phrog_27911 unknown function unknown function -1 24438 25187
YP_008240316.1 NC_021784_p12 peptidoglycan-binding lysin domain-containing phrog_380 endolysin lysis -1 7204 7875
YP_008240364.1 NC_021784_p60 integrase phrog_1 integrase integration and excision 1 36870 38054
YP_008240309.1 NC_021784_p5 rhodanese-related sulfurtransferase phrog_3321 rhodanese-related sulfurtransferase other -1 2132 2506
YP_008240327.1 NC_021784_p23 hypothetical protein phrog_422 major head protein head and packaging -1 14340 15158
YP_008240319.1 NC_021784_p15 core tail protein phrog_365 tail protein tail -1 10730 11194
YP_008240315.1 NC_021784_p11 hypothetical protein phrog_400 tail protein tail -1 6243 7160
YP_008240353.1 NC_021784_p49 hypothetical protein phrog_26597 unknown function unknown function -1 32225 32503