Genomic map of Listeria phage LP-110 (NC_021785)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021785
Definition
Listeria phage LP-110, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Homburgvirus.
DB of origin
REFSEQ
Length
65132
Host Name
Listeria
Host domain
Bacteria
Is prophage?
undef
Number of proteins
113
%GC
36.34
Number of singletons
2
Number of paralogs
9

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008240404.1 NC_021785_p40 hypothetical protein phrog_17911 unknown function unknown function -1 16150 16395
YP_008240456.1 NC_021785_p93 DNA replication protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 50800 51582
YP_008240422.1 NC_021785_p58 hypothetical protein phrog_10628 unknown function unknown function -1 21464 21700
YP_008240369.1 NC_021785_p5 hypothetical protein phrog_17753 unknown function unknown function 1 1995 2456
YP_008240431.1 NC_021785_p67 terminase large subunit phrog_2 terminase large subunit head and packaging 1 28362 29705
YP_008240403.1 NC_021785_p39 hypothetical protein phrog_2316 unknown function unknown function -1 15833 16129
YP_008240407.1 NC_021785_p43 hypothetical protein phrog_20263 unknown function unknown function -1 17195 17392
YP_008997833.1 NC_021785_p90 hypothetical protein phrog_18039 unknown function unknown function -1 49333 49533
YP_008240467.1 NC_021785_p104 hypothetical protein phrog_18628 unknown function unknown function 1 60208 60900
YP_008240367.1 NC_021785_p3 hypothetical protein phrog_17084 unknown function unknown function 1 1099 1578
YP_008240457.1 NC_021785_p94 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 51583 52911
YP_008240394.1 NC_021785_p30 DUF1642 domain protein phrog_121 unknown function unknown function -1 12710 13096
YP_008240448.1 NC_021785_p84 hypothetical protein phrog_7571 unknown function unknown function -1 46395 46595
YP_008240384.1 NC_021785_p19 hypothetical protein phrog_4264 unknown function unknown function 1 7768 8115
YP_008240465.1 NC_021785_p102 sigma factor phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 59380 59745
YP_008240424.1 NC_021785_p60 hypothetical protein phrog_17111 unknown function unknown function -1 22142 22528
YP_008240383.1 NC_021785_p18 hypothetical protein phrog_17278 unknown function unknown function 1 7556 7756
YP_008240372.1 NC_021785_p8 hypothetical protein phrog_18681 unknown function unknown function 1 3151 3333
YP_008240401.1 NC_021785_p37 hypothetical protein phrog_6406 unknown function unknown function -1 15214 15444
YP_008240406.1 NC_021785_p42 hypothetical protein phrog_21092 unknown function unknown function -1 16992 17192
YP_008240376.1 NC_021785_p12 hypothetical protein phrog_17786 unknown function unknown function 1 4619 4927
YP_008240425.1 NC_021785_p61 terminase small subunit phrog_51 terminase small subunit head and packaging 1 22850 23350
YP_008240368.1 NC_021785_p4 hypothetical protein phrog_17542 unknown function unknown function 1 1568 2002
YP_008240421.1 NC_021785_p57 hypothetical protein phrog_17836 unknown function unknown function -1 21218 21451
YP_008240400.1 NC_021785_p36 hypothetical protein phrog_18615 unknown function unknown function -1 14892 15170
YP_008240393.1 NC_021785_p29 hypothetical protein phrog_17830 unknown function unknown function -1 12570 12713
YP_008240463.1 NC_021785_p100 crossover junction endodeoxyribonuclease phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 58340 58852
YP_008240440.1 NC_021785_p76 hypothetical protein phrog_17081 unknown function unknown function 1 35808 36194
YP_008240413.1 NC_021785_p49 hypothetical protein phrog_18373 unknown function unknown function -1 19290 19499
YP_008240388.1 NC_021785_p23 hypothetical protein phrog_18690 unknown function unknown function 1 9949 10248
YP_008997832.1 NC_021785_p24 hypothetical protein phrog_27735 unknown function unknown function 1 10649 10774
YP_008240450.1 NC_021785_p86 hypothetical protein phrog_18550 unknown function unknown function -1 46949 47149
YP_008240391.1 NC_021785_p27 hypothetical protein phrog_16767 unknown function unknown function -1 11823 12008
YP_008240429.1 NC_021785_p65 holin phrog_297 holin lysis 1 27062 27346
YP_008240460.1 NC_021785_p97 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 54383 56650
YP_008240381.1 NC_021785_p16 hypothetical protein phrog_5149 unknown function unknown function 1 7028 7270
YP_008240398.1 NC_021785_p34 hypothetical protein phrog_1666 unknown function unknown function -1 14139 14396
YP_008240476.1 NC_021785_p113 hypothetical protein phrog_17097 unknown function unknown function 1 64866 65075
YP_008240416.1 NC_021785_p52 hypothetical protein phrog_6406 unknown function unknown function -1 20009 20254
YP_008240382.1 NC_021785_p17 hypothetical protein phrog_16753 unknown function unknown function 1 7263 7556
YP_008240454.1 NC_021785_p91 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 49839 50342
YP_008240396.2 NC_021785_p32 hypothetical protein phrog_19990 unknown function unknown function -1 13812 13976
YP_008240446.1 NC_021785_p82 tail protein phrog_202 distal tail protein Dit tail 1 41457 43547
YP_008240415.1 NC_021785_p51 hypothetical protein phrog_6406 unknown function unknown function -1 19765 20019
YP_008240474.1 NC_021785_p111 hypothetical protein phrog_17535 unknown function unknown function 1 63956 64636
YP_008240461.1 NC_021785_p98 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 56706 57317
YP_008240397.1 NC_021785_p33 hypothetical protein phrog_23978 unknown function unknown function -1 13987 14142
YP_008240445.1 NC_021785_p81 tail tape measure protein phrog_1533 tail length tape measure protein tail 1 38541 41453
YP_008240366.1 NC_021785_p2 hypothetical protein phrog_21823 unknown function unknown function 1 791 1018
YP_008240402.1 NC_021785_p38 His-Me finger endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism -1 15458 15769
YP_008240469.1 NC_021785_p106 hypothetical protein phrog_19802 unknown function unknown function 1 61103 61369
YP_008240441.1 NC_021785_p77 DUF3168 domain protein phrog_176 tail terminator connector 1 36194 36613
YP_008240414.1 NC_021785_p50 hypothetical protein phrog_17919 unknown function unknown function -1 19513 19713
YP_008240466.1 NC_021785_p103 hypothetical protein phrog_18507 unknown function unknown function 1 59705 60115
YP_008240408.1 NC_021785_p44 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism -1 17435 18139
YP_008240437.1 NC_021785_p73 fibronectin type III domain containing protein phrog_18435 unknown function unknown function 1 34102 34980
YP_008240386.1 NC_021785_p21 hypothetical protein phrog_18105 unknown function unknown function 1 8626 8931
YP_008240399.1 NC_021785_p35 hypothetical protein phrog_20947 unknown function unknown function -1 14398 14892
YP_008240455.1 NC_021785_p92 hypothetical protein phrog_6154 unknown function unknown function 1 50398 50781
YP_008240420.1 NC_021785_p56 hypothetical protein phrog_10628 unknown function unknown function -1 20955 21206
YP_008240412.1 NC_021785_p48 hypothetical protein phrog_18191 unknown function unknown function -1 19035 19277
YP_008240464.1 NC_021785_p101 P-loop containing nucleoside triphosphate hydrolase phrog_139 deoxynucleoside monophosphate kinase other 1 58854 59402
YP_008240417.1 NC_021785_p53 hypothetical protein phrog_6406 unknown function unknown function -1 20247 20492
YP_008240471.1 NC_021785_p108 AAA_5 domain containing protein phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover 1 61744 62766
YP_008240475.1 NC_021785_p112 hypothetical protein phrog_18570 unknown function unknown function 1 64640 64873
YP_008240459.1 NC_021785_p96 hypothetical protein phrog_17905 methyltransferase other 1 53947 54402
YP_008240379.1 NC_021785_p14 hypothetical protein phrog_18584 unknown function unknown function 1 6261 6494
YP_008240427.1 NC_021785_p63 DUF2479 domain containing protein phrog_18602 virion structural protein head and packaging 1 25264 26703
YP_008240365.1 NC_021785_p1 hypothetical protein phrog_18431 unknown function unknown function 1 16 804
YP_008240395.1 NC_021785_p31 DUF1642 domain containing protein phrog_121 unknown function unknown function -1 13096 13728
YP_008240438.1 NC_021785_p74 hypothetical protein phrog_132 head-tail adaptor connector 1 35058 35417
YP_008240434.1 NC_021785_p70 DUF4355 domain containing protein phrog_172 head scaffolding protein head and packaging 1 32248 32889
YP_008240436.1 NC_021785_p72 hypothetical protein phrog_17541 unknown function unknown function 1 33891 34088
YP_008240418.1 NC_021785_p54 hypothetical protein phrog_10526 unknown function unknown function -1 20489 20722
YP_008240385.1 NC_021785_p20 hypothetical protein phrog_7822 unknown function unknown function 1 8187 8633
YP_008240428.1 NC_021785_p64 hypothetical protein phrog_1009 unknown function unknown function 1 26727 27065
YP_008240439.1 NC_021785_p75 hypothetical protein phrog_16721 unknown function unknown function 1 35414 35830
YP_008240374.1 NC_021785_p10 hypothetical protein phrog_7296 unknown function unknown function 1 3553 4062
YP_008240419.1 NC_021785_p55 hypothetical protein phrog_10526 unknown function unknown function -1 20725 20952
YP_008240411.1 NC_021785_p47 hypothetical protein phrog_18055 unknown function unknown function -1 18825 19025
YP_008240426.1 NC_021785_p62 DUF2479 domain containing protein phrog_3639 minor tail protein tail 1 23353 25251
YP_008240387.1 NC_021785_p22 LPXTG cell wall anchor domain containing protein phrog_16892 unknown function unknown function 1 8992 9816
YP_008240392.1 NC_021785_p28 hypothetical protein phrog_16663 unknown function unknown function -1 11998 12555
YP_008240373.1 NC_021785_p9 hypothetical protein phrog_6414 unknown function unknown function 1 3340 3531
YP_008240423.1 NC_021785_p59 hypothetical protein phrog_17491 unknown function unknown function -1 21690 22133
YP_008240380.1 NC_021785_p15 hypothetical protein phrog_17663 unknown function unknown function 1 6597 6929
YP_008240458.1 NC_021785_p95 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 52988 53953
YP_008240405.1 NC_021785_p41 hypothetical protein singleton unknown function unknown function -1 16396 16995
YP_008240443.1 NC_021785_p79 hypothetical protein phrog_18667 unknown function unknown function 1 37427 37735
YP_008240470.1 NC_021785_p107 hypothetical protein phrog_17709 unknown function unknown function 1 61444 61722
YP_008240433.1 NC_021785_p69 capsid morphogenesis protein phrog_8089 head morphogenesis head and packaging 1 31394 32179
YP_008240451.1 NC_021785_p87 hypothetical protein phrog_6883 unknown function unknown function -1 47162 47869
YP_008240435.1 NC_021785_p71 major capsid protein phrog_544 major head protein head and packaging 1 32920 33825
YP_008240452.1 NC_021785_p88 hypothetical protein phrog_17927 unknown function unknown function -1 48116 48634
YP_008240432.1 NC_021785_p68 portal protein phrog_64 portal protein head and packaging 1 29738 31387
YP_008240453.1 NC_021785_p89 hypothetical protein singleton unknown function unknown function -1 48631 48747
YP_008240442.1 NC_021785_p78 major tail protein phrog_41 major tail protein tail 1 36637 37347
YP_008240389.1 NC_021785_p25 hypothetical protein phrog_17121 unknown function unknown function -1 11427 11621
YP_008240447.1 NC_021785_p83 minor structural protein phrog_17797 tail protein tail 1 43559 46348
YP_008240370.1 NC_021785_p6 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 2456 2722
YP_008240462.1 NC_021785_p99 hypothetical protein phrog_1706 CRISPR/Cas system associated DNA, RNA and nucleotide metabolism 1 57318 58343
YP_008240377.1 NC_021785_p13 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 4924 5442
YP_008240430.1 NC_021785_p66 endolysin phrog_5115 ferredoxin moron, auxiliary metabolic gene and host takeover 1 27346 28293
YP_008240444.1 NC_021785_p80 hypothetical protein phrog_17465 unknown function unknown function 1 37798 38541
YP_008240409.1 NC_021785_p45 hypothetical protein phrog_27701 unknown function unknown function -1 18187 18402
YP_008240472.1 NC_021785_p109 hypothetical protein phrog_7005 unknown function unknown function 1 62785 63696
YP_008240371.1 NC_021785_p7 hypothetical protein phrog_18081 unknown function unknown function 1 2715 3044
YP_008240449.1 NC_021785_p85 hypothetical protein phrog_17281 unknown function unknown function -1 46588 46959
YP_008240473.1 NC_021785_p110 hypothetical protein phrog_18040 unknown function unknown function 1 63697 63963
YP_008240375.1 NC_021785_p11 hypothetical protein phrog_7296 unknown function unknown function 1 4077 4622
YP_008240390.1 NC_021785_p26 hypothetical protein phrog_34951 unknown function unknown function -1 11638 11802
YP_008240410.1 NC_021785_p46 hypothetical protein phrog_681 endonuclease DNA, RNA and nucleotide metabolism -1 18381 18776
YP_008240468.1 NC_021785_p105 hypothetical protein phrog_17749 unknown function unknown function 1 60916 61140