Genomic map of Listeria phage LP-037 (NC_021787)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021787
Definition
Listeria phage LP-037, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Homburgvirus.
DB of origin
REFSEQ
Length
64756
Host Name
Listeria
Host domain
Bacteria
Is prophage?
undef
Number of proteins
114
%GC
36.55
Number of singletons
1
Number of paralogs
7

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008240503.1 NC_021787_p97 AAA_5 domain containing protein phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover 1 56315 57337
YP_008240566.1 NC_021787_p48 hypothetical protein phrog_17111 unknown function unknown function -1 16169 16555
YP_008240486.1 NC_021787_p80 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44416 44919
YP_008240489.1 NC_021787_p83 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 46160 47488
YP_008240491.1 NC_021787_p85 hypothetical protein phrog_17905 methyltransferase other 1 48533 48979
YP_008997835.1 NC_021787_p18 hypothetical protein phrog_19990 unknown function unknown function -1 7929 8093
YP_008240556.1 NC_021787_p38 hypothetical protein phrog_20334 unknown function unknown function -1 13482 13745
YP_008240508.1 NC_021787_p102 hypothetical protein phrog_17097 unknown function unknown function 1 59479 59640
YP_008240505.1 NC_021787_p99 hypothetical protein phrog_18040 unknown function unknown function 1 58268 58534
YP_008240588.1 NC_021787_p70 tail protein phrog_202 distal tail protein Dit tail 1 35510 37600
YP_008240485.1 NC_021787_p78 radical SAM domain containing protein phrog_17662 unknown function unknown function -1 42684 43337
YP_008240548.1 NC_021787_p30 hypothetical protein phrog_20263 unknown function unknown function -1 10974 11171
YP_008240560.1 NC_021787_p42 hypothetical protein phrog_10526 unknown function unknown function -1 14516 14749
YP_008240575.1 NC_021787_p57 capsid morphogenesis protein phrog_8089 head morphogenesis head and packaging 1 25425 26210
YP_008240551.1 NC_021787_p33 hypothetical protein phrog_681 endonuclease DNA, RNA and nucleotide metabolism -1 12160 12555
YP_008240570.1 NC_021787_p52 hypothetical protein phrog_1009 unknown function unknown function 1 20740 21096
YP_008240586.1 NC_021787_p68 hypothetical protein phrog_17465 unknown function unknown function 1 31830 32573
YP_008240494.1 NC_021787_p88 hypothetical protein phrog_1706 CRISPR/Cas system associated DNA, RNA and nucleotide metabolism 1 51895 52920
YP_008240585.1 NC_021787_p67 hypothetical protein phrog_18667 unknown function unknown function 1 31480 31767
YP_008240554.1 NC_021787_p36 hypothetical protein phrog_18373 unknown function unknown function -1 13069 13278
YP_008240542.1 NC_021787_p24 hypothetical protein phrog_21953 unknown function unknown function -1 9554 9730
YP_008997834.1 NC_021787_p11 hypothetical protein phrog_27735 unknown function unknown function 1 5128 5250
YP_008240481.1 NC_021787_p73 hypothetical protein phrog_17281 unknown function unknown function -1 40641 41012
YP_008240498.1 NC_021787_p92 hypothetical protein phrog_18507 unknown function unknown function 1 54282 54692
YP_008240501.1 NC_021787_p95 hypothetical protein phrog_19802 unknown function unknown function 1 55674 55940
YP_008240544.1 NC_021787_p26 hypothetical protein phrog_2316 unknown function unknown function -1 10115 10411
YP_008240482.1 NC_021787_p74 hypothetical protein phrog_18550 unknown function unknown function -1 41002 41202
YP_008240525.1 NC_021787_p5 hypothetical protein phrog_17278 unknown function unknown function 1 2022 2222
YP_008240513.1 NC_021787_p107 hypothetical protein phrog_17753 unknown function unknown function 1 61682 62143
YP_008240562.1 NC_021787_p44 hypothetical protein phrog_10628 unknown function unknown function -1 14982 15233
YP_008240572.1 NC_021787_p54 endolysin phrog_5115 ferredoxin moron, auxiliary metabolic gene and host takeover 1 21377 22324
YP_008240540.1 NC_021787_p22 hypothetical protein phrog_18615 unknown function unknown function -1 9009 9287
YP_008240569.1 NC_021787_p51 DUF2479 domain containing protein phrog_18602 virion structural protein head and packaging 1 19295 20734
YP_008240497.1 NC_021787_p91 sigma factor phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 53957 54322
YP_008240531.1 NC_021787_p12 hypothetical protein phrog_17121 unknown function unknown function -1 5896 6090
YP_008240584.1 NC_021787_p66 major tail protein phrog_41 major tail protein tail 1 30669 31379
YP_008240561.1 NC_021787_p43 hypothetical protein phrog_10526 unknown function unknown function -1 14752 14979
YP_008240512.1 NC_021787_p106 hypothetical protein phrog_17542 unknown function unknown function 1 61255 61689
YP_008240555.1 NC_021787_p37 hypothetical protein phrog_17919 unknown function unknown function -1 13292 13495
YP_008240527.1 NC_021787_p7 hypothetical protein phrog_7822 unknown function unknown function 1 2653 3099
YP_008240538.1 NC_021787_p20 hypothetical protein singleton unknown function unknown function -1 8256 8456
YP_008240507.1 NC_021787_p101 hypothetical protein phrog_18570 unknown function unknown function 1 59205 59438
YP_008240537.1 NC_021787_p19 hypothetical protein phrog_23978 unknown function unknown function -1 8104 8259
YP_008240578.1 NC_021787_p60 hypothetical protein phrog_17541 unknown function unknown function 1 27923 28120
YP_008240553.1 NC_021787_p35 hypothetical protein phrog_18191 unknown function unknown function -1 12814 13056
YP_008240517.1 NC_021787_p111 hypothetical protein phrog_6414 unknown function unknown function 1 63054 63245
YP_008240495.1 NC_021787_p89 crossover junction endodeoxyribonuclease phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 52917 53429
YP_008240509.1 NC_021787_p103 hypothetical protein phrog_18431 unknown function unknown function 1 59702 60490
YP_008240520.1 NC_021787_p114 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 64093 64611
YP_008240496.1 NC_021787_p90 P-loop containing nucleoside triphosphate hydrolase phrog_139 deoxynucleoside monophosphate kinase other 1 53431 53979
YP_008240571.1 NC_021787_p53 holin phrog_297 holin lysis 1 21093 21377
YP_008240504.1 NC_021787_p98 hypothetical protein phrog_7005 unknown function unknown function 1 57356 58267
YP_008240567.1 NC_021787_p49 terminase small subunit phrog_51 terminase small subunit head and packaging 1 16881 17381
YP_008240534.1 NC_021787_p15 hypothetical protein phrog_17830 unknown function unknown function -1 6849 7004
YP_008240565.1 NC_021787_p47 hypothetical protein phrog_17491 unknown function unknown function -1 15717 16160
YP_008240547.1 NC_021787_p29 hypothetical protein phrog_21092 unknown function unknown function -1 10771 10971
YP_008240580.1 NC_021787_p62 hypothetical protein phrog_132 head-tail adaptor connector 1 29090 29449
YP_008240502.1 NC_021787_p96 hypothetical protein phrog_17709 unknown function unknown function 1 56015 56293
YP_008240522.1 NC_021787_p2 hypothetical protein phrog_17663 unknown function unknown function 1 1063 1395
YP_008240500.1 NC_021787_p94 hypothetical protein phrog_17749 unknown function unknown function 1 55487 55711
YP_008240510.1 NC_021787_p104 hypothetical protein phrog_21823 unknown function unknown function 1 60477 60704
YP_008997836.1 NC_021787_p71 minor structural protein phrog_17797 tail protein tail 1 37612 40401
YP_008240564.1 NC_021787_p46 hypothetical protein phrog_10628 unknown function unknown function -1 15491 15727
YP_008240532.1 NC_021787_p13 hypothetical protein phrog_16767 unknown function unknown function -1 6115 6300
YP_008240558.1 NC_021787_p40 hypothetical protein phrog_6406 unknown function unknown function -1 14036 14281
YP_008240536.1 NC_021787_p17 DUF1642 domain containing protein phrog_121 unknown function unknown function -1 7210 7845
YP_008240514.1 NC_021787_p108 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 62143 62409
YP_008240563.1 NC_021787_p45 hypothetical protein phrog_17836 unknown function unknown function -1 15245 15478
YP_008240550.1 NC_021787_p32 hypothetical protein phrog_27701 unknown function unknown function -1 11966 12181
YP_008240529.1 NC_021787_p9 LPXTG cell wall anchor domain containing protein phrog_16892 unknown function unknown function 1 3457 4293
YP_008240545.1 NC_021787_p27 hypothetical protein phrog_17911 unknown function unknown function -1 10432 10677
YP_008240488.1 NC_021787_p82 DNA replication protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 45377 46159
YP_008240559.1 NC_021787_p41 hypothetical protein phrog_6406 unknown function unknown function -1 14274 14519
YP_008240530.1 NC_021787_p10 hypothetical protein phrog_18690 unknown function unknown function 1 4428 4727
YP_008240576.1 NC_021787_p58 DUF4355 domain containing protein phrog_172 head scaffolding protein head and packaging 1 26280 26921
YP_008240573.1 NC_021787_p55 terminase large subunit phrog_2 terminase large subunit head and packaging 1 22393 23736
YP_008997837.1 NC_021787_p76 hypothetical protein phrog_35832 unknown function unknown function 1 41923 42198
YP_008240581.1 NC_021787_p63 hypothetical protein phrog_16721 unknown function unknown function 1 29446 29862
YP_008240533.1 NC_021787_p14 hypothetical protein phrog_16663 unknown function unknown function -1 6290 6847
YP_008240518.1 NC_021787_p112 hypothetical protein phrog_7296 unknown function unknown function 1 63255 63776
YP_008240574.1 NC_021787_p56 portal protein phrog_64 portal protein head and packaging 1 23769 25418
YP_008240493.1 NC_021787_p87 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 51283 51894
YP_008240543.1 NC_021787_p25 His-Me finger endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism -1 9740 10051
YP_008240582.1 NC_021787_p64 hypothetical protein phrog_17081 unknown function unknown function 1 29840 30226
YP_008240535.1 NC_021787_p16 DUF1642 domain protein phrog_26006 unknown function unknown function -1 7001 7210
YP_008240515.1 NC_021787_p109 hypothetical protein phrog_18081 unknown function unknown function 1 62402 62731
YP_008240499.1 NC_021787_p93 hypothetical protein phrog_18628 unknown function unknown function 1 54785 55471
YP_008240519.1 NC_021787_p113 hypothetical protein phrog_17786 unknown function unknown function 1 63791 64096
YP_008240506.1 NC_021787_p100 hypothetical protein phrog_17535 unknown function unknown function 1 58527 59201
YP_008240528.1 NC_021787_p8 hypothetical protein phrog_18105 unknown function unknown function 1 3092 3397
YP_008240568.1 NC_021787_p50 DUF2479 domain containing protein phrog_3639 minor tail protein tail 1 17384 19282
YP_008240492.1 NC_021787_p86 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 48960 51227
YP_008240483.1 NC_021787_p75 hypothetical protein phrog_6883 unknown function unknown function -1 41215 41922
YP_008240516.1 NC_021787_p110 hypothetical protein phrog_18681 unknown function unknown function 1 62865 63047
YP_008240523.1 NC_021787_p3 hypothetical protein phrog_5149 unknown function unknown function 1 1494 1736
YP_008240552.1 NC_021787_p34 hypothetical protein phrog_18055 unknown function unknown function -1 12604 12804
YP_008240539.1 NC_021787_p21 hypothetical protein phrog_20947 unknown function unknown function -1 8515 9009
YP_008240490.1 NC_021787_p84 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 47565 48530
YP_008240526.1 NC_021787_p6 hypothetical protein phrog_4264 unknown function unknown function 1 2234 2581
YP_008240480.1 NC_021787_p72 hypothetical protein phrog_7571 unknown function unknown function -1 40448 40648
YP_008240587.1 NC_021787_p69 tail tape measure protein phrog_1533 tail length tape measure protein tail 1 32573 35506
YP_008240511.1 NC_021787_p105 hypothetical protein phrog_17084 unknown function unknown function 1 60786 61265
YP_008240579.1 NC_021787_p61 fibronectin type III domain containing protein phrog_18435 unknown function unknown function 1 28134 29012
YP_008240484.1 NC_021787_p77 hypothetical protein phrog_17927 unknown function unknown function -1 42169 42687
YP_008240487.1 NC_021787_p81 hypothetical protein phrog_6154 unknown function unknown function 1 44975 45358
YP_008240557.1 NC_021787_p39 hypothetical protein phrog_6406 unknown function unknown function -1 13792 14046
YP_008997838.1 NC_021787_p79 hypothetical protein phrog_18039 unknown function unknown function -1 43910 44110
YP_008240577.1 NC_021787_p59 major capsid protein phrog_544 major head protein head and packaging 1 26952 27857
YP_008240541.1 NC_021787_p23 hypothetical protein phrog_6406 unknown function unknown function -1 9331 9561
YP_008240549.1 NC_021787_p31 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism -1 11214 11918
YP_008240521.1 NC_021787_p1 hypothetical protein phrog_18584 unknown function unknown function 1 727 960
YP_008240524.1 NC_021787_p4 hypothetical protein phrog_16753 unknown function unknown function 1 1729 2022
YP_008240583.1 NC_021787_p65 DUF3168 domain protein phrog_176 tail terminator connector 1 30226 30645
YP_008240546.1 NC_021787_p28 hypothetical protein phrog_38652 unknown function unknown function -1 10659 10793