Genomic map of Cellulophaga phage phi18:1 (NC_021790)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021790
Definition
Cellulophaga phage phi18:1, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Helsingorvirus.
DB of origin
REFSEQ
Length
39189
Host Name
Cellulophaga baltica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
65
%GC
36.51
Number of singletons
6
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008240936.1 NC_021790_p22 hypothetical protein phrog_25739 unknown function unknown function 1 10356 10601
YP_008240917.1 NC_021790_p3 hypothetical protein phrog_25301 unknown function unknown function -1 1533 1697
YP_008240972.1 NC_021790_p58 tail length tape measure protein phrog_24676 tail length tape measure protein tail 1 30944 32707
YP_008240924.1 NC_021790_p10 hypothetical protein phrog_27226 unknown function unknown function -1 4773 5078
YP_008240978.1 NC_021790_p64 N-acetylmuramoyl-L-alanine amidase phrog_435 endolysin lysis 1 38167 38709
YP_008240941.1 NC_021790_p27 hypothetical protein phrog_32216 unknown function unknown function 1 13764 13895
YP_008240976.1 NC_021790_p62 hypothetical protein phrog_21885 unknown function unknown function 1 37170 37610
YP_008240916.1 NC_021790_p2 hypothetical protein phrog_757 DNA methyltransferase other -1 919 1536
YP_008240946.1 NC_021790_p32 hypothetical protein phrog_4334 unknown function unknown function 1 15743 16129
YP_008240975.1 NC_021790_p61 structural protein phrog_25379 tail protein tail 1 36100 37170
YP_008240969.1 NC_021790_p55 phage tail protein phrog_1407 major tail protein tail 1 29783 30217
YP_008240933.1 NC_021790_p19 hypothetical protein phrog_26162 unknown function unknown function 1 8983 9162
YP_008240951.1 NC_021790_p37 hypothetical protein singleton unknown function unknown function 1 20374 20604
YP_008240970.1 NC_021790_p56 hypothetical protein phrog_26725 unknown function unknown function 1 30231 30650
YP_008240929.1 NC_021790_p15 hypothetical protein phrog_3322 endonuclease DNA, RNA and nucleotide metabolism 1 7715 8143
YP_008240925.1 NC_021790_p11 exonuclease, DNA polymerase III subunit epsilon phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 5121 5681
YP_008240960.1 NC_021790_p46 hypothetical protein phrog_26291 unknown function unknown function -1 23590 23892
YP_008240977.1 NC_021790_p63 holin phrog_14914 holin lysis 1 37653 38204
YP_008240958.1 NC_021790_p44 hypothetical protein phrog_14027 unknown function unknown function 1 23201 23368
YP_008240945.1 NC_021790_p31 hypothetical protein singleton unknown function unknown function 1 15569 15709
YP_008240920.1 NC_021790_p6 hypothetical protein singleton unknown function unknown function -1 2140 2451
YP_008240949.1 NC_021790_p35 phage portal protein phrog_12 portal protein head and packaging 1 18106 19509
YP_008240979.1 NC_021790_p65 hypothetical protein phrog_5885 unknown function unknown function 1 38693 39124
YP_008240923.1 NC_021790_p9 hypothetical protein phrog_8542 unknown function unknown function -1 4099 4758
YP_008240939.1 NC_021790_p25 hypothetical protein phrog_24623 unknown function unknown function 1 11717 12034
YP_008240967.1 NC_021790_p53 phage tail component phrog_5 tail completion or Neck1 protein connector 1 28924 29337
YP_008240959.1 NC_021790_p45 hypothetical protein phrog_10907 unknown function unknown function 1 23365 23574
YP_008240928.1 NC_021790_p14 hypothetical protein phrog_15583 unknown function unknown function 1 7548 7757
YP_008240944.1 NC_021790_p30 hypothetical protein singleton unknown function unknown function 1 15130 15369
YP_008240943.1 NC_021790_p29 VRR-NUC domain containing protein phrog_824 unknown function unknown function 1 14344 15108
YP_008240952.1 NC_021790_p38 hypothetical protein phrog_27322 unknown function unknown function 1 20607 20903
YP_008240955.1 NC_021790_p41 glycosyltransferase phrog_26101 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 21505 22728
YP_008240968.1 NC_021790_p54 hypothetical protein phrog_27535 unknown function unknown function 1 29341 29778
YP_008240950.1 NC_021790_p36 phage minor capsid protein phrog_2468 head morphogenesis head and packaging 1 19502 20332
YP_008240953.1 NC_021790_p39 hypothetical protein phrog_27071 unknown function unknown function 1 20896 21048
YP_008240965.1 NC_021790_p51 phage head-tail joining protein phrog_25 head closure Hc1 connector 1 26707 27108
YP_008240921.1 NC_021790_p7 hypothetical protein phrog_26336 unknown function unknown function -1 2539 2772
YP_008240934.1 NC_021790_p20 hypothetical protein phrog_22244 unknown function unknown function 1 9180 9356
YP_008240948.1 NC_021790_p34 phage terminase large subunit phrog_38 terminase large subunit head and packaging 1 16667 18067
YP_008240922.1 NC_021790_p8 hypothetical protein phrog_1499 unknown function unknown function -1 2772 4025
YP_008240956.1 NC_021790_p42 hypothetical protein singleton unknown function unknown function 1 22735 23040
YP_008240919.1 NC_021790_p5 hypothetical protein phrog_24936 unknown function unknown function -1 1839 2012
YP_008240935.1 NC_021790_p21 DNA methylase phrog_116 DNA methyltransferase other 1 9442 10359
YP_008240915.1 NC_021790_p1 DNA methylase phrog_116 DNA methyltransferase other -1 4 867
YP_008240942.1 NC_021790_p28 hypothetical protein phrog_24923 unknown function unknown function 1 13967 14353
YP_008240937.1 NC_021790_p23 VirE N-domain protein phrog_23402 unknown function unknown function 1 10601 11506
YP_008240974.1 NC_021790_p60 structural protein phrog_24134 virion structural protein head and packaging 1 35429 36097
YP_008240930.1 NC_021790_p16 hypothetical protein phrog_35562 unknown function unknown function 1 8165 8392
YP_008240963.1 NC_021790_p49 phage major capsid protein phrog_10 major head protein head and packaging 1 24849 26093
YP_008240964.1 NC_021790_p50 head-tail connector protein phrog_40 head-tail adaptor Ad1 connector 1 26163 26705
YP_008240962.1 NC_021790_p48 phage prohead protease protein phrog_80 head maturation protease head and packaging 1 24178 24846
YP_008240940.1 NC_021790_p26 virulance associated protein E, VirE phrog_1313 DNA helicase DNA, RNA and nucleotide metabolism 1 12094 13500
YP_008240973.1 NC_021790_p59 structural protein phrog_23570 virion structural protein head and packaging 1 32710 35427
YP_008240961.1 NC_021790_p47 hypothetical protein phrog_26076 unknown function unknown function -1 23889 24080
YP_008240918.1 NC_021790_p4 hypothetical protein phrog_27599 unknown function unknown function -1 1694 1837
YP_008240971.1 NC_021790_p57 hypothetical protein phrog_16333 unknown function unknown function 1 30610 30942
YP_008240931.1 NC_021790_p17 hypothetical protein singleton unknown function unknown function 1 8385 8552
YP_008240954.1 NC_021790_p40 DNA methylase phrog_27561 DNA methyltransferase other 1 21056 21523
YP_008240966.1 NC_021790_p52 phage tail fiber phrog_38537 tail fiber protein tail 1 27114 28919
YP_008240932.1 NC_021790_p18 hypothetical protein phrog_26810 unknown function unknown function 1 8542 8949
YP_008240938.1 NC_021790_p24 hypothetical protein phrog_23369 unknown function unknown function 1 11503 11745
YP_008240926.1 NC_021790_p12 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 5735 7216
YP_008240947.1 NC_021790_p33 phage terminase small subunit phrog_1482 terminase small subunit head and packaging 1 16175 16663
YP_008240957.1 NC_021790_p43 hypothetical protein phrog_26470 unknown function unknown function 1 23018 23200
YP_008240927.1 NC_021790_p13 hypothetical protein phrog_23334 unknown function unknown function 1 7222 7545