| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_021791 |
Definition |
Cellulophaga phage phi12:1, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Helsingorvirus. |
DB of origin |
REFSEQ |
Length |
39148 |
Host Name |
Cellulophaga baltica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
64 |
%GC |
36.58 |
Number of singletons |
7 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008241003.1 | NC_021791_p24 | virulance associated protein E, VirE | phrog_1313 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 11264 | 12670 |
| YP_008241039.1 | NC_021791_p60 | phage tail protein | phrog_25379 | tail protein | tail | 1 | 35963 | 37129 |
| YP_008241033.1 | NC_021791_p54 | phage tail protein | phrog_1407 | major tail protein | tail | 1 | 29655 | 30089 |
| YP_008241038.1 | NC_021791_p59 | structural protein | phrog_24134 | virion structural protein | head and packaging | 1 | 35292 | 35960 |
| YP_008240982.1 | NC_021791_p3 | hypothetical protein | phrog_27599 | unknown function | unknown function | -1 | 998 | 1162 |
| YP_008240985.1 | NC_021791_p6 | DNA methylase | phrog_67 | DNA methyltransferase | other | -1 | 1899 | 2702 |
| YP_008240981.1 | NC_021791_p2 | hypothetical protein | phrog_25301 | unknown function | unknown function | -1 | 837 | 1001 |
| YP_008240989.1 | NC_021791_p10 | hypothetical protein | phrog_27226 | unknown function | unknown function | -1 | 5047 | 5313 |
| YP_008241042.1 | NC_021791_p63 | N-acetylmuramoyl-L-alanine amidase | phrog_435 | endolysin | lysis | 1 | 38126 | 38668 |
| YP_008241001.1 | NC_021791_p22 | hypothetical protein | phrog_23369 | unknown function | unknown function | 1 | 10672 | 10914 |
| YP_008241020.1 | NC_021791_p41 | hypothetical protein | phrog_26470 | unknown function | unknown function | 1 | 22222 | 22404 |
| YP_008241025.1 | NC_021791_p46 | phage prohead protease protein | phrog_80 | head maturation protease | head and packaging | 1 | 23381 | 24049 |
| YP_008241000.1 | NC_021791_p21 | VirE N-domain protein | phrog_23402 | unknown function | unknown function | 1 | 9770 | 10675 |
| YP_008241023.1 | NC_021791_p44 | hypothetical protein | phrog_26291 | unknown function | unknown function | -1 | 22794 | 23096 |
| YP_008241008.1 | NC_021791_p29 | hypothetical protein | phrog_24923 | unknown function | unknown function | 1 | 14217 | 14606 |
| YP_008241009.1 | NC_021791_p30 | VRR-NUC domain containing protein | phrog_824 | unknown function | unknown function | 1 | 14597 | 15361 |
| YP_008240987.1 | NC_021791_p8 | hypothetical protein | phrog_1499 | unknown function | unknown function | -1 | 3044 | 4327 |
| YP_008240991.1 | NC_021791_p12 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 6010 | 7491 |
| YP_008241018.1 | NC_021791_p39 | DNA methylase | phrog_27561 | DNA methyltransferase | other | 1 | 20545 | 21012 |
| YP_008240980.1 | NC_021791_p1 | DNA methylase | phrog_116 | DNA methyltransferase | other | -1 | 4 | 840 |
| YP_008241030.1 | NC_021791_p51 | hypothetical protein | phrog_33201 | unknown function | unknown function | 1 | 27687 | 28799 |
| YP_008241019.1 | NC_021791_p40 | glycosyltransferase | phrog_26101 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 20994 | 22217 |
| YP_008241004.1 | NC_021791_p25 | DNA methylase | phrog_56 | DNA methyltransferase | other | 1 | 12702 | 13385 |
| YP_008241002.1 | NC_021791_p23 | hypothetical protein | phrog_24623 | unknown function | unknown function | 1 | 10904 | 11203 |
| YP_008240993.1 | NC_021791_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7821 | 7997 |
| YP_008240983.1 | NC_021791_p4 | hypothetical protein | phrog_24936 | unknown function | unknown function | -1 | 1143 | 1316 |
| YP_008241013.1 | NC_021791_p34 | phage terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 16387 | 17787 |
| YP_008241005.1 | NC_021791_p26 | hypothetical protein | singleton | unknown function | unknown function | -1 | 13382 | 13504 |
| YP_008241027.1 | NC_021791_p48 | head-tail connector protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 25366 | 25908 |
| YP_008241010.1 | NC_021791_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15367 | 15579 |
| YP_008240998.1 | NC_021791_p19 | hypothetical protein | phrog_22244 | unknown function | unknown function | 1 | 9257 | 9433 |
| YP_008241041.1 | NC_021791_p62 | holin | phrog_14914 | holin | lysis | 1 | 37612 | 38163 |
| YP_008241017.1 | NC_021791_p38 | hypothetical protein | phrog_27071 | unknown function | unknown function | 1 | 20385 | 20537 |
| YP_008241007.1 | NC_021791_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13852 | 14214 |
| YP_008241029.1 | NC_021791_p50 | phage tail fiber | phrog_16053 | tail fiber protein | tail | 1 | 26368 | 27687 |
| YP_008241032.1 | NC_021791_p53 | hypothetical protein | phrog_27535 | unknown function | unknown function | 1 | 29213 | 29650 |
| YP_008241024.1 | NC_021791_p45 | hypothetical protein | phrog_26076 | unknown function | unknown function | -1 | 23093 | 23284 |
| YP_008241026.1 | NC_021791_p47 | phage major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 24052 | 25296 |
| YP_008240999.1 | NC_021791_p20 | hypothetical protein | phrog_25739 | unknown function | unknown function | 1 | 9519 | 9767 |
| YP_008240995.1 | NC_021791_p16 | hypothetical protein | phrog_3322 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 8206 | 8595 |
| YP_008241021.1 | NC_021791_p42 | hypothetical protein | phrog_14027 | unknown function | unknown function | 1 | 22405 | 22572 |
| YP_008240986.1 | NC_021791_p7 | hypothetical protein | phrog_26336 | unknown function | unknown function | -1 | 2811 | 3044 |
| YP_008241028.1 | NC_021791_p49 | phage head-tail joining protein | phrog_25 | head closure Hc1 | connector | 1 | 25910 | 26362 |
| YP_008240997.1 | NC_021791_p18 | hypothetical protein | phrog_26162 | unknown function | unknown function | 1 | 9060 | 9239 |
| YP_008240990.1 | NC_021791_p11 | exonuclease, DNA polymerase III subunit epsilon | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 5396 | 5956 |
| YP_008240992.1 | NC_021791_p13 | hypothetical protein | phrog_23334 | unknown function | unknown function | 1 | 7507 | 7818 |
| YP_008241037.1 | NC_021791_p58 | structural protein | phrog_23570 | virion structural protein | head and packaging | 1 | 32584 | 35289 |
| YP_008241011.1 | NC_021791_p32 | phage terminase small subunit | phrog_1482 | terminase small subunit | head and packaging | 1 | 15566 | 16054 |
| YP_008241022.1 | NC_021791_p43 | hypothetical protein | phrog_10907 | unknown function | unknown function | 1 | 22569 | 22778 |
| YP_008241040.1 | NC_021791_p61 | hypothetical protein | phrog_21885 | unknown function | unknown function | 1 | 37129 | 37569 |
| YP_008241031.1 | NC_021791_p52 | phage tail component | phrog_5 | tail completion or Neck1 protein | connector | 1 | 28796 | 29209 |
| YP_008241035.1 | NC_021791_p56 | hypothetical protein | phrog_16333 | unknown function | unknown function | 1 | 30494 | 30814 |
| YP_008240994.1 | NC_021791_p15 | hypothetical protein | phrog_15583 | unknown function | unknown function | 1 | 8000 | 8209 |
| YP_008241043.1 | NC_021791_p64 | hypothetical protein | phrog_5885 | unknown function | unknown function | 1 | 38652 | 39083 |
| YP_008241016.1 | NC_021791_p37 | hypothetical protein | phrog_27322 | unknown function | unknown function | 1 | 20096 | 20392 |
| YP_008240996.1 | NC_021791_p17 | hypothetical protein | phrog_26810 | unknown function | unknown function | 1 | 8619 | 9026 |
| YP_008241015.1 | NC_021791_p36 | phage minor capsid protein | phrog_2468 | head morphogenesis | head and packaging | 1 | 19224 | 20054 |
| YP_008241006.1 | NC_021791_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13678 | 13779 |
| YP_008240988.1 | NC_021791_p9 | hypothetical protein | phrog_8542 | unknown function | unknown function | -1 | 4373 | 5032 |
| YP_008241012.1 | NC_021791_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16057 | 16386 |
| YP_008240984.1 | NC_021791_p5 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1458 | 1856 |
| YP_008241036.1 | NC_021791_p57 | tail length tape measure protein | phrog_24676 | tail length tape measure protein | tail | 1 | 30816 | 32579 |
| YP_008241014.1 | NC_021791_p35 | phage portal protein | phrog_12 | portal protein | head and packaging | 1 | 17825 | 19231 |
| YP_008241034.1 | NC_021791_p55 | hypothetical protein | phrog_26725 | unknown function | unknown function | 1 | 30103 | 30522 |