Genomic map of Cellulophaga phage phi12:1 (NC_021791)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021791
Definition
Cellulophaga phage phi12:1, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Helsingorvirus.
DB of origin
REFSEQ
Length
39148
Host Name
Cellulophaga baltica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
64
%GC
36.58
Number of singletons
7
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008241003.1 NC_021791_p24 virulance associated protein E, VirE phrog_1313 DNA helicase DNA, RNA and nucleotide metabolism 1 11264 12670
YP_008241039.1 NC_021791_p60 phage tail protein phrog_25379 tail protein tail 1 35963 37129
YP_008241033.1 NC_021791_p54 phage tail protein phrog_1407 major tail protein tail 1 29655 30089
YP_008241038.1 NC_021791_p59 structural protein phrog_24134 virion structural protein head and packaging 1 35292 35960
YP_008240982.1 NC_021791_p3 hypothetical protein phrog_27599 unknown function unknown function -1 998 1162
YP_008240985.1 NC_021791_p6 DNA methylase phrog_67 DNA methyltransferase other -1 1899 2702
YP_008240981.1 NC_021791_p2 hypothetical protein phrog_25301 unknown function unknown function -1 837 1001
YP_008240989.1 NC_021791_p10 hypothetical protein phrog_27226 unknown function unknown function -1 5047 5313
YP_008241042.1 NC_021791_p63 N-acetylmuramoyl-L-alanine amidase phrog_435 endolysin lysis 1 38126 38668
YP_008241001.1 NC_021791_p22 hypothetical protein phrog_23369 unknown function unknown function 1 10672 10914
YP_008241020.1 NC_021791_p41 hypothetical protein phrog_26470 unknown function unknown function 1 22222 22404
YP_008241025.1 NC_021791_p46 phage prohead protease protein phrog_80 head maturation protease head and packaging 1 23381 24049
YP_008241000.1 NC_021791_p21 VirE N-domain protein phrog_23402 unknown function unknown function 1 9770 10675
YP_008241023.1 NC_021791_p44 hypothetical protein phrog_26291 unknown function unknown function -1 22794 23096
YP_008241008.1 NC_021791_p29 hypothetical protein phrog_24923 unknown function unknown function 1 14217 14606
YP_008241009.1 NC_021791_p30 VRR-NUC domain containing protein phrog_824 unknown function unknown function 1 14597 15361
YP_008240987.1 NC_021791_p8 hypothetical protein phrog_1499 unknown function unknown function -1 3044 4327
YP_008240991.1 NC_021791_p12 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 6010 7491
YP_008241018.1 NC_021791_p39 DNA methylase phrog_27561 DNA methyltransferase other 1 20545 21012
YP_008240980.1 NC_021791_p1 DNA methylase phrog_116 DNA methyltransferase other -1 4 840
YP_008241030.1 NC_021791_p51 hypothetical protein phrog_33201 unknown function unknown function 1 27687 28799
YP_008241019.1 NC_021791_p40 glycosyltransferase phrog_26101 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 20994 22217
YP_008241004.1 NC_021791_p25 DNA methylase phrog_56 DNA methyltransferase other 1 12702 13385
YP_008241002.1 NC_021791_p23 hypothetical protein phrog_24623 unknown function unknown function 1 10904 11203
YP_008240993.1 NC_021791_p14 hypothetical protein singleton unknown function unknown function 1 7821 7997
YP_008240983.1 NC_021791_p4 hypothetical protein phrog_24936 unknown function unknown function -1 1143 1316
YP_008241013.1 NC_021791_p34 phage terminase large subunit phrog_38 terminase large subunit head and packaging 1 16387 17787
YP_008241005.1 NC_021791_p26 hypothetical protein singleton unknown function unknown function -1 13382 13504
YP_008241027.1 NC_021791_p48 head-tail connector protein phrog_40 head-tail adaptor Ad1 connector 1 25366 25908
YP_008241010.1 NC_021791_p31 hypothetical protein singleton unknown function unknown function 1 15367 15579
YP_008240998.1 NC_021791_p19 hypothetical protein phrog_22244 unknown function unknown function 1 9257 9433
YP_008241041.1 NC_021791_p62 holin phrog_14914 holin lysis 1 37612 38163
YP_008241017.1 NC_021791_p38 hypothetical protein phrog_27071 unknown function unknown function 1 20385 20537
YP_008241007.1 NC_021791_p28 hypothetical protein singleton unknown function unknown function 1 13852 14214
YP_008241029.1 NC_021791_p50 phage tail fiber phrog_16053 tail fiber protein tail 1 26368 27687
YP_008241032.1 NC_021791_p53 hypothetical protein phrog_27535 unknown function unknown function 1 29213 29650
YP_008241024.1 NC_021791_p45 hypothetical protein phrog_26076 unknown function unknown function -1 23093 23284
YP_008241026.1 NC_021791_p47 phage major capsid protein phrog_10 major head protein head and packaging 1 24052 25296
YP_008240999.1 NC_021791_p20 hypothetical protein phrog_25739 unknown function unknown function 1 9519 9767
YP_008240995.1 NC_021791_p16 hypothetical protein phrog_3322 endonuclease DNA, RNA and nucleotide metabolism 1 8206 8595
YP_008241021.1 NC_021791_p42 hypothetical protein phrog_14027 unknown function unknown function 1 22405 22572
YP_008240986.1 NC_021791_p7 hypothetical protein phrog_26336 unknown function unknown function -1 2811 3044
YP_008241028.1 NC_021791_p49 phage head-tail joining protein phrog_25 head closure Hc1 connector 1 25910 26362
YP_008240997.1 NC_021791_p18 hypothetical protein phrog_26162 unknown function unknown function 1 9060 9239
YP_008240990.1 NC_021791_p11 exonuclease, DNA polymerase III subunit epsilon phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 5396 5956
YP_008240992.1 NC_021791_p13 hypothetical protein phrog_23334 unknown function unknown function 1 7507 7818
YP_008241037.1 NC_021791_p58 structural protein phrog_23570 virion structural protein head and packaging 1 32584 35289
YP_008241011.1 NC_021791_p32 phage terminase small subunit phrog_1482 terminase small subunit head and packaging 1 15566 16054
YP_008241022.1 NC_021791_p43 hypothetical protein phrog_10907 unknown function unknown function 1 22569 22778
YP_008241040.1 NC_021791_p61 hypothetical protein phrog_21885 unknown function unknown function 1 37129 37569
YP_008241031.1 NC_021791_p52 phage tail component phrog_5 tail completion or Neck1 protein connector 1 28796 29209
YP_008241035.1 NC_021791_p56 hypothetical protein phrog_16333 unknown function unknown function 1 30494 30814
YP_008240994.1 NC_021791_p15 hypothetical protein phrog_15583 unknown function unknown function 1 8000 8209
YP_008241043.1 NC_021791_p64 hypothetical protein phrog_5885 unknown function unknown function 1 38652 39083
YP_008241016.1 NC_021791_p37 hypothetical protein phrog_27322 unknown function unknown function 1 20096 20392
YP_008240996.1 NC_021791_p17 hypothetical protein phrog_26810 unknown function unknown function 1 8619 9026
YP_008241015.1 NC_021791_p36 phage minor capsid protein phrog_2468 head morphogenesis head and packaging 1 19224 20054
YP_008241006.1 NC_021791_p27 hypothetical protein singleton unknown function unknown function 1 13678 13779
YP_008240988.1 NC_021791_p9 hypothetical protein phrog_8542 unknown function unknown function -1 4373 5032
YP_008241012.1 NC_021791_p33 hypothetical protein singleton unknown function unknown function 1 16057 16386
YP_008240984.1 NC_021791_p5 hypothetical protein singleton unknown function unknown function -1 1458 1856
YP_008241036.1 NC_021791_p57 tail length tape measure protein phrog_24676 tail length tape measure protein tail 1 30816 32579
YP_008241014.1 NC_021791_p35 phage portal protein phrog_12 portal protein head and packaging 1 17825 19231
YP_008241034.1 NC_021791_p55 hypothetical protein phrog_26725 unknown function unknown function 1 30103 30522