| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_021800 |
Definition |
Cellulophaga phage phi46:1, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
34844 |
Host Name |
Cellulophaga baltica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
54 |
%GC |
38.25 |
Number of singletons |
35 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008241849.1 | NC_021800_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30257 | 30382 |
| YP_008241821.1 | NC_021800_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8756 | 9256 |
| YP_008241812.1 | NC_021800_p5 | hypothetical protein | phrog_21217 | unknown function | unknown function | 1 | 3163 | 3777 |
| YP_008241857.1 | NC_021800_p50 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33045 | 33449 |
| YP_008241850.1 | NC_021800_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30619 | 31011 |
| YP_008241838.1 | NC_021800_p31 | hypothetical protein | phrog_3322 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 23389 | 23769 |
| YP_008241830.1 | NC_021800_p23 | phage integrase family site-specific recombinase | phrog_1 | integrase | integration and excision | -1 | 18705 | 19901 |
| YP_008241855.1 | NC_021800_p48 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32405 | 32572 |
| YP_008241815.1 | NC_021800_p8 | structural protein | singleton | unknown function | unknown function | 1 | 6595 | 7122 |
| YP_008241832.1 | NC_021800_p25 | helix-turn-helix domain containing protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 20307 | 20672 |
| YP_008241846.1 | NC_021800_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28839 | 29069 |
| YP_008241847.1 | NC_021800_p40 | DnaA protein | singleton | unknown function | unknown function | 1 | 29088 | 29600 |
| YP_008241837.1 | NC_021800_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22976 | 23383 |
| YP_008241858.1 | NC_021800_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33454 | 33636 |
| YP_008241813.1 | NC_021800_p6 | SGNH hydrolase | phrog_38537 | tail fiber protein | tail | 1 | 3798 | 5402 |
| YP_008241841.1 | NC_021800_p34 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 26375 | 27805 |
| YP_008241814.1 | NC_021800_p7 | phage portal protein | phrog_11226 | portal protein | head and packaging | 1 | 5501 | 6613 |
| YP_008241839.1 | NC_021800_p32 | virulence-associated protein E /helicase/ primase | phrog_15962 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 23914 | 26127 |
| YP_008241840.1 | NC_021800_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26131 | 26439 |
| YP_008241808.1 | NC_021800_p1 | prophage Clp protease-like protein | phrog_53 | head maturation protease | head and packaging | 1 | 3 | 1058 |
| YP_008241828.1 | NC_021800_p21 | phage tail tape measure protein | singleton | unknown function | unknown function | 1 | 14913 | 17462 |
| YP_008241826.1 | NC_021800_p19 | structural protein | singleton | unknown function | unknown function | 1 | 11937 | 13040 |
| YP_008241825.1 | NC_021800_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11468 | 11935 |
| YP_008241819.1 | NC_021800_p12 | N-acetylmuramyl-L-alanine amidase | phrog_822 | amidase | lysis | 1 | 8219 | 8635 |
| YP_008241834.1 | NC_021800_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21148 | 21843 |
| YP_008241824.1 | NC_021800_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11052 | 11465 |
| YP_008241836.1 | NC_021800_p29 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22428 | 22979 |
| YP_008241823.1 | NC_021800_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10516 | 11046 |
| YP_008241854.1 | NC_021800_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31990 | 32121 |
| YP_008241861.1 | NC_021800_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34578 | 34841 |
| YP_008241856.1 | NC_021800_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32797 | 33066 |
| YP_008241822.1 | NC_021800_p15 | phage terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 9249 | 10514 |
| YP_008241817.1 | NC_021800_p10 | hypothetical protein | phrog_25644 | unknown function | unknown function | 1 | 7257 | 7769 |
| YP_008241820.1 | NC_021800_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8632 | 8763 |
| YP_008241845.1 | NC_021800_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28688 | 28867 |
| YP_008241835.1 | NC_021800_p28 | hydrolase | phrog_318 | deoxyribonucleoside 5' monophosphate phosphatase | other | 1 | 21925 | 22452 |
| YP_008241833.1 | NC_021800_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20839 | 21033 |
| YP_008241831.1 | NC_021800_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19991 | 20173 |
| YP_008241859.1 | NC_021800_p52 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33641 | 33901 |
| YP_008241818.1 | NC_021800_p11 | phage holin | phrog_13191 | holin | lysis | 1 | 7757 | 8215 |
| YP_008241809.1 | NC_021800_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1083 | 1391 |
| YP_008241860.1 | NC_021800_p53 | phage integrase family protein | phrog_216 | integrase | integration and excision | 1 | 33962 | 34504 |
| YP_008241853.1 | NC_021800_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31582 | 31752 |
| YP_008241852.1 | NC_021800_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31349 | 31585 |
| YP_008241810.1 | NC_021800_p3 | structural protein | singleton | unknown function | unknown function | 1 | 1427 | 2455 |
| YP_008241827.1 | NC_021800_p20 | structural protein | singleton | unknown function | unknown function | 1 | 13049 | 14881 |
| YP_008241816.1 | NC_021800_p9 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7119 | 7247 |
| YP_008241851.1 | NC_021800_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31021 | 31179 |
| YP_008241842.1 | NC_021800_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27979 | 28107 |
| YP_008241848.1 | NC_021800_p41 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 29614 | 30180 |
| YP_008241844.1 | NC_021800_p37 | VRR-NUC domain protein | phrog_824 | unknown function | unknown function | 1 | 28327 | 28686 |
| YP_008241843.1 | NC_021800_p36 | hypothetical protein | phrog_30782 | unknown function | unknown function | 1 | 28088 | 28342 |
| YP_008241829.1 | NC_021800_p22 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17496 | 18710 |
| YP_008241811.1 | NC_021800_p4 | hypothetical protein | phrog_21217 | unknown function | unknown function | 1 | 2523 | 3092 |