Genomic map of Cellulophaga phage phi39:1 (NC_021804)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021804
Definition
Cellulophaga phage phi39:1, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
28760
Host Name
Cellulophaga baltica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
48
%GC
31.33
Number of singletons
31
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008242177.1 NC_021804_p25 structural protein singleton unknown function unknown function 1 16625 18127
YP_008242153.1 NC_021804_p1 hypothetical protein phrog_625 unknown function unknown function 1 80 475
YP_008242197.1 NC_021804_p45 hypothetical protein singleton unknown function unknown function 1 27401 27613
YP_008242198.1 NC_021804_p46 hypothetical protein singleton unknown function unknown function 1 27626 27769
YP_008242196.1 NC_021804_p44 hypothetical protein singleton unknown function unknown function 1 27255 27407
YP_008242184.1 NC_021804_p32 hypothetical protein singleton unknown function unknown function 1 21711 21995
YP_008242194.1 NC_021804_p42 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 25425 26936
YP_008242171.1 NC_021804_p19 hypothetical protein singleton unknown function unknown function 1 10330 10704
YP_008242160.1 NC_021804_p8 hypothetical protein singleton unknown function unknown function 1 3916 4146
YP_008242190.1 NC_021804_p38 hypothetical protein phrog_11501 unknown function unknown function 1 23610 24386
YP_008242154.1 NC_021804_p2 hypothetical protein singleton unknown function unknown function 1 496 711
YP_008242172.1 NC_021804_p20 hypothetical protein phrog_16333 unknown function unknown function 1 10766 11056
YP_008242186.1 NC_021804_p34 hypothetical protein singleton unknown function unknown function 1 22512 22727
YP_008242159.1 NC_021804_p7 hypothetical protein singleton unknown function unknown function 1 3671 3919
YP_008242181.1 NC_021804_p29 hypothetical protein singleton unknown function unknown function 1 20968 21069
YP_008242162.1 NC_021804_p10 phage portal protein phrog_12 portal protein head and packaging 1 4407 5636
YP_008242200.1 NC_021804_p48 hypothetical protein singleton unknown function unknown function 1 28297 28713
YP_008242180.1 NC_021804_p28 hypothetical protein singleton unknown function unknown function 1 20576 20965
YP_008242156.1 NC_021804_p4 phage terminase small subunit singleton terminase small subunit head and packaging 1 1020 1538
YP_008242173.1 NC_021804_p21 phage tape measure protein phrog_28 tail length tape measure protein tail 1 11069 13249
YP_008242193.1 NC_021804_p41 helix-turn-helix domain containing protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 24751 25407
YP_008242185.1 NC_021804_p33 hypothetical protein singleton unknown function unknown function 1 22265 22519
YP_008242188.1 NC_021804_p36 hypothetical protein singleton unknown function unknown function 1 22961 23125
YP_008242157.1 NC_021804_p5 phage terminase large subunit phrog_9 terminase large subunit head and packaging 1 1545 3293
YP_008242174.1 NC_021804_p22 structural protein singleton unknown function unknown function 1 13255 16062
YP_008242166.1 NC_021804_p14 structural protein phrog_442 head-tail adaptor connector 1 8126 8674
YP_008242175.1 NC_021804_p23 structural protein singleton unknown function unknown function 1 15917 16291
YP_008242169.1 NC_021804_p17 structural protein singleton unknown function unknown function 1 9480 9848
YP_008242158.1 NC_021804_p6 hypothetical protein singleton unknown function unknown function 1 3317 3622
YP_008242191.1 NC_021804_p39 hypothetical protein singleton unknown function unknown function 1 24373 24567
YP_008242187.1 NC_021804_p35 hypothetical protein singleton unknown function unknown function 1 22714 22968
YP_008242199.1 NC_021804_p47 hypothetical protein singleton unknown function unknown function 1 27781 28293
YP_008242165.1 NC_021804_p13 hypothetical protein singleton unknown function unknown function 1 7637 8122
YP_008242178.1 NC_021804_p26 pectate lyase phrog_27797 pectate lyase moron, auxiliary metabolic gene and host takeover 1 18139 20172
YP_008242161.1 NC_021804_p9 hypothetical protein singleton unknown function unknown function 1 4058 4354
YP_008242176.1 NC_021804_p24 structural protein singleton unknown function unknown function 1 16302 16625
YP_008242195.1 NC_021804_p43 HNH endonuclease domain protein phrog_589 HNH endonuclease DNA, RNA and nucleotide metabolism 1 26929 27246
YP_008242155.1 NC_021804_p3 hypothetical protein singleton unknown function unknown function 1 717 887
YP_008242183.1 NC_021804_p31 alpha-amylase singleton unknown function unknown function 1 21494 21793
YP_008242179.1 NC_021804_p27 hypothetical protein singleton unknown function unknown function 1 20181 20573
YP_008242192.1 NC_021804_p40 hypothetical protein singleton unknown function unknown function 1 24564 24761
YP_008242163.1 NC_021804_p11 prohead protease phrog_80 head maturation protease head and packaging 1 5626 6228
YP_008242168.1 NC_021804_p16 structural protein phrog_5 tail completion or Neck1 protein connector 1 9016 9474
YP_008242182.1 NC_021804_p30 hypothetical protein phrog_1501 unknown function unknown function 1 21066 21497
YP_008242170.1 NC_021804_p18 structural protein phrog_1407 major tail protein tail 1 9851 10303
YP_008242164.1 NC_021804_p12 phage capsid protein phrog_10 major head protein head and packaging 1 6228 7547
YP_008242189.1 NC_021804_p37 hypothetical protein phrog_12688 unknown function unknown function 1 23149 23580
YP_008242167.1 NC_021804_p15 structural protein singleton unknown function unknown function 1 8676 9026