Genomic map of Lactococcus phage P680 (NC_021852)

functional categories (each PHROG annotation is associated to a category)             Notes   
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG

More about this genome

Lactococcus phage P680, complete genome.
Molecule type
Genome structure
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
Host Name
Host domain
Is prophage?
Number of proteins
Number of singletons
Number of paralogs

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008318059.1 NC_021852_p16 hypothetical protein phrog_1424 tail protein tail 1 13147 14043
YP_008318060.1 NC_021852_p17 hypothetical protein phrog_1432 tail associated lysin tail 1 14043 15170
YP_008318048.1 NC_021852_p5 head protease phrog_80 head maturation protease head and packaging 1 3789 4325
YP_008318067.1 NC_021852_p24 hypothetical protein phrog_5152 unknown function unknown function -1 18325 18573
YP_008318076.1 NC_021852_p33 hypothetical protein phrog_1508 unknown function unknown function -1 21130 21249
YP_008318062.1 NC_021852_p19 receptor binding protein phrog_6779 tail protein tail 1 15443 16246
YP_008318080.1 NC_021852_p37 hypothetical protein phrog_1295 unknown function unknown function -1 23252 23464
YP_008318064.1 NC_021852_p21 endolysin phrog_670 endolysin lysis 1 16618 17319
YP_008318058.1 NC_021852_p15 tail tape measure protein phrog_58 tail length tape measure protein tail 1 10397 13147
YP_008318077.1 NC_021852_p34 hypothetical protein phrog_56 DNA methyltransferase other -1 21307 22170
YP_008318078.1 NC_021852_p35 hypothetical protein phrog_10825 unknown function unknown function -1 22411 22656
YP_008318053.1 NC_021852_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6416 6781
YP_008318069.1 NC_021852_p26 hypothetical protein phrog_1415 unknown function unknown function -1 19036 19383
YP_008318092.1 NC_021852_p49 hypothetical protein phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28521 29003
YP_008318090.1 NC_021852_p47 hypothetical protein phrog_1952 unknown function unknown function 1 28260 28388
YP_008318055.1 NC_021852_p12 hypothetical protein phrog_1433 major tail protein tail 1 8855 9553
YP_008318088.1 NC_021852_p45 hypothetical protein phrog_5487 unknown function unknown function -1 27023 27193
YP_008318073.1 NC_021852_p30 hypothetical protein phrog_3365 unknown function unknown function -1 20282 20470
YP_008318072.1 NC_021852_p29 hypothetical protein phrog_1509 unknown function unknown function -1 19961 20218
YP_008318044.1 NC_021852_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 238 762
YP_008318081.1 NC_021852_p38 hypothetical protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 23477 23836
YP_008318079.1 NC_021852_p36 hypothetical protein phrog_1317 unknown function unknown function -1 22743 23255
YP_008318050.1 NC_021852_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5520 5783
YP_008318084.1 NC_021852_p41 hypothetical protein phrog_2228 unknown function unknown function -1 24901 25281
YP_008318075.1 NC_021852_p32 hypothetical protein phrog_1225 unknown function unknown function -1 20822 21130
YP_008318083.1 NC_021852_p40 hypothetical protein phrog_1449 unknown function unknown function -1 24394 24801
YP_008318054.1 NC_021852_p11 hypothetical protein phrog_2370 neck passage structure connector 1 6838 8832
YP_008318061.1 NC_021852_p18 hypothetical protein phrog_1434 unknown function unknown function 1 15160 15453
YP_008318068.1 NC_021852_p25 hypothetical protein phrog_1430 unknown function unknown function -1 18594 18863
YP_008318052.1 NC_021852_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6087 6425
YP_008318065.1 NC_021852_p22 hypothetical protein phrog_3874 transglycosylase other -1 17427 17963
YP_008318091.1 NC_021852_p48 hypothetical protein phrog_1436 unknown function unknown function 1 28393 28524
YP_008318057.1 NC_021852_p14 hypothetical protein phrog_1421 virion structural protein head and packaging 1 9885 10397
YP_008318049.1 NC_021852_p6 hypothetical protein phrog_1393 minor head protein head and packaging 1 4318 5499
YP_008318046.1 NC_021852_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2375 2659
YP_008318071.1 NC_021852_p28 hypothetical protein phrog_2530 unknown function unknown function -1 19728 19931
YP_008318087.1 NC_021852_p44 HNH endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism -1 26481 26831
YP_008318066.1 NC_021852_p23 hypothetical protein phrog_5087 unknown function unknown function -1 18053 18310
YP_008318047.1 NC_021852_p4 portal protein phrog_12 portal protein head and packaging 1 2690 3808
YP_008318086.1 NC_021852_p43 DNA polymerase subunit phrog_1284 unknown function unknown function -1 25588 26484
YP_008318070.1 NC_021852_p27 hypothetical protein phrog_1441 unknown function unknown function -1 19383 19616
YP_008318063.1 NC_021852_p20 holin phrog_1379 unknown function unknown function 1 16268 16621
YP_008318074.1 NC_021852_p31 hypothetical protein phrog_6037 unknown function unknown function -1 20546 20806
YP_008318056.1 NC_021852_p13 hypothetical protein phrog_1420 virion structural protein head and packaging 1 9590 9865
YP_008318045.1 NC_021852_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 763 2385
YP_008318089.1 NC_021852_p46 hypothetical protein phrog_1656 unknown function unknown function -1 27941 28129
YP_008318082.1 NC_021852_p39 hypothetical protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 23841 24407
YP_008318051.1 NC_021852_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5783 6097
YP_008318085.1 NC_021852_p42 hypothetical protein phrog_1405 unknown function unknown function -1 25332 25595