Genomic map of Lactococcus phage phi7 (NC_021855)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021855
Definition
Lactococcus phage phi7, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
REFSEQ
Length
32382
Host Name
Lactococcus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
57
%GC
34.21
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008318226.1 NC_021855_p24 hypothetical protein phrog_5152 unknown function unknown function -1 18802 19056
YP_008318243.1 NC_021855_p41 sak protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24327 24893
YP_008318250.1 NC_021855_p48 hypothetical protein phrog_12970 unknown function unknown function -1 28232 28402
YP_008318228.1 NC_021855_p26 hypothetical protein phrog_1415 unknown function unknown function -1 19497 19844
YP_008318218.1 NC_021855_p16 tail tape-measure protein phrog_58 tail length tape measure protein tail 1 11188 13938
YP_008318256.1 NC_021855_p54 hypothetical protein phrog_1436 unknown function unknown function 1 30544 30675
YP_008318235.1 NC_021855_p33 hypothetical protein phrog_1508 unknown function unknown function -1 21342 21461
YP_008318244.1 NC_021855_p42 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 24890 25681
YP_008318232.1 NC_021855_p30 hypothetical protein phrog_3365 unknown function unknown function -1 20497 20742
YP_008318242.1 NC_021855_p40 hypothetical protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 23963 24322
YP_008318205.1 NC_021855_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2378 2662
YP_008318217.1 NC_021855_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10676 11188
YP_008318220.1 NC_021855_p18 hypothetical protein phrog_1432 tail associated lysin tail 1 14834 15961
YP_008318255.1 NC_021855_p53 hypothetical protein phrog_1952 unknown function unknown function 1 30411 30539
YP_008318204.1 NC_021855_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 766 2388
YP_008318211.1 NC_021855_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6096 6437
YP_008318247.1 NC_021855_p45 hypothetical protein phrog_1405 unknown function unknown function -1 26612 26875
YP_008318238.1 NC_021855_p36 hypothetical protein phrog_4546 unknown function unknown function -1 22666 22776
YP_008318246.1 NC_021855_p44 hypothetical protein phrog_2228 unknown function unknown function -1 26175 26561
YP_008318221.1 NC_021855_p19 hypothetical protein phrog_1434 unknown function unknown function 1 15951 16244
YP_008318212.1 NC_021855_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6428 6793
YP_008318236.1 NC_021855_p34 hypothetical protein phrog_56 DNA methyltransferase other -1 21519 22424
YP_008318203.1 NC_021855_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 241 765
YP_008318234.1 NC_021855_p32 hypothetical protein phrog_1225 unknown function unknown function -1 21034 21342
YP_008318239.1 NC_021855_p37 hypothetical protein phrog_1919 unknown function unknown function -1 22811 23206
YP_008318245.1 NC_021855_p43 hypothetical protein phrog_1449 unknown function unknown function -1 25668 26075
YP_008318229.1 NC_021855_p27 hypothetical protein phrog_1441 unknown function unknown function -1 19844 20011
YP_008318237.1 NC_021855_p35 hypothetical protein phrog_1825 DNA methyltransferase other -1 22417 22665
YP_008318222.1 NC_021855_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16234 17028
YP_008318257.1 NC_021855_p55 holliday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 30672 31154
YP_008318240.1 NC_021855_p38 hypothetical protein phrog_1317 unknown function unknown function -1 23226 23735
YP_008318219.1 NC_021855_p17 hypothetical protein phrog_1424 tail protein tail 1 13938 14834
YP_008318252.1 NC_021855_p50 hypothetical protein phrog_9199 unknown function unknown function -1 28888 29073
YP_008318225.1 NC_021855_p23 hypothetical protein phrog_3874 transglycosylase other -1 18200 18751
YP_008318259.1 NC_021855_p57 hypothetical protein singleton unknown function unknown function 1 31593 31784
YP_008318241.1 NC_021855_p39 hypothetical protein phrog_1295 unknown function unknown function -1 23732 23947
YP_008318254.1 NC_021855_p52 hypothetical protein phrog_1656 unknown function unknown function 1 29774 29968
YP_008318209.1 NC_021855_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5522 5785
YP_008318210.1 NC_021855_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5785 6099
YP_008318233.1 NC_021855_p31 hypothetical protein phrog_6037 unknown function unknown function -1 20760 20957
YP_008318231.1 NC_021855_p29 hypothetical protein phrog_1509 unknown function unknown function -1 20180 20434
YP_008318206.1 NC_021855_p4 portal protein phrog_12 portal protein head and packaging 1 2656 3810
YP_008318251.1 NC_021855_p49 hypothetical protein phrog_18661 unknown function unknown function -1 28460 28873
YP_008318208.1 NC_021855_p6 hypothetical protein phrog_1393 minor head protein head and packaging 1 4320 5501
YP_008318253.1 NC_021855_p51 hypothetical protein phrog_2413 unknown function unknown function -1 29564 29683
YP_008318215.1 NC_021855_p13 hypothetical protein phrog_5983 tail protein tail 1 9747 10364
YP_008318227.1 NC_021855_p25 hypothetical protein phrog_1430 unknown function unknown function -1 19053 19322
YP_008318216.1 NC_021855_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 10381 10656
YP_008318214.1 NC_021855_p12 hypothetical protein phrog_1433 major tail protein tail 1 8840 9745
YP_008318213.1 NC_021855_p11 hypothetical protein phrog_28468 minor head protein head and packaging 1 6850 8775
YP_008318230.1 NC_021855_p28 hypothetical protein phrog_1820 unknown function unknown function -1 20011 20187
YP_008318223.1 NC_021855_p21 holin phrog_1379 unknown function unknown function 1 17050 17403
YP_008318224.1 NC_021855_p22 endolysin phrog_670 endolysin lysis 1 17400 18107
YP_008318258.1 NC_021855_p56 hypothetical protein phrog_1652 unknown function unknown function 1 31151 31318
YP_008318207.1 NC_021855_p5 prohead protease phrog_80 head maturation protease head and packaging 1 3791 4327
YP_008318249.1 NC_021855_p47 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 27802 28239
YP_008318248.1 NC_021855_p46 DNA polymerase phrog_1284 unknown function unknown function -1 26868 27815