| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_021855 |
Definition |
Lactococcus phage phi7, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
REFSEQ |
Length |
32382 |
Host Name |
Lactococcus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
57 |
%GC |
34.21 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008318226.1 | NC_021855_p24 | hypothetical protein | phrog_5152 | unknown function | unknown function | -1 | 18802 | 19056 |
| YP_008318243.1 | NC_021855_p41 | sak protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 24327 | 24893 |
| YP_008318250.1 | NC_021855_p48 | hypothetical protein | phrog_12970 | unknown function | unknown function | -1 | 28232 | 28402 |
| YP_008318228.1 | NC_021855_p26 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 19497 | 19844 |
| YP_008318218.1 | NC_021855_p16 | tail tape-measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 11188 | 13938 |
| YP_008318256.1 | NC_021855_p54 | hypothetical protein | phrog_1436 | unknown function | unknown function | 1 | 30544 | 30675 |
| YP_008318235.1 | NC_021855_p33 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 21342 | 21461 |
| YP_008318244.1 | NC_021855_p42 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 24890 | 25681 |
| YP_008318232.1 | NC_021855_p30 | hypothetical protein | phrog_3365 | unknown function | unknown function | -1 | 20497 | 20742 |
| YP_008318242.1 | NC_021855_p40 | hypothetical protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 23963 | 24322 |
| YP_008318205.1 | NC_021855_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2378 | 2662 |
| YP_008318217.1 | NC_021855_p15 | hypothetical protein | phrog_1421 | virion structural protein | head and packaging | 1 | 10676 | 11188 |
| YP_008318220.1 | NC_021855_p18 | hypothetical protein | phrog_1432 | tail associated lysin | tail | 1 | 14834 | 15961 |
| YP_008318255.1 | NC_021855_p53 | hypothetical protein | phrog_1952 | unknown function | unknown function | 1 | 30411 | 30539 |
| YP_008318204.1 | NC_021855_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 766 | 2388 |
| YP_008318211.1 | NC_021855_p9 | hypothetical protein | phrog_1484 | virion structural protein | head and packaging | 1 | 6096 | 6437 |
| YP_008318247.1 | NC_021855_p45 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 26612 | 26875 |
| YP_008318238.1 | NC_021855_p36 | hypothetical protein | phrog_4546 | unknown function | unknown function | -1 | 22666 | 22776 |
| YP_008318246.1 | NC_021855_p44 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 26175 | 26561 |
| YP_008318221.1 | NC_021855_p19 | hypothetical protein | phrog_1434 | unknown function | unknown function | 1 | 15951 | 16244 |
| YP_008318212.1 | NC_021855_p10 | hypothetical protein | phrog_1440 | virion structural protein | head and packaging | 1 | 6428 | 6793 |
| YP_008318236.1 | NC_021855_p34 | hypothetical protein | phrog_56 | DNA methyltransferase | other | -1 | 21519 | 22424 |
| YP_008318203.1 | NC_021855_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 241 | 765 |
| YP_008318234.1 | NC_021855_p32 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 21034 | 21342 |
| YP_008318239.1 | NC_021855_p37 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 22811 | 23206 |
| YP_008318245.1 | NC_021855_p43 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 25668 | 26075 |
| YP_008318229.1 | NC_021855_p27 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 19844 | 20011 |
| YP_008318237.1 | NC_021855_p35 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 22417 | 22665 |
| YP_008318222.1 | NC_021855_p20 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 16234 | 17028 |
| YP_008318257.1 | NC_021855_p55 | holliday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 30672 | 31154 |
| YP_008318240.1 | NC_021855_p38 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 23226 | 23735 |
| YP_008318219.1 | NC_021855_p17 | hypothetical protein | phrog_1424 | tail protein | tail | 1 | 13938 | 14834 |
| YP_008318252.1 | NC_021855_p50 | hypothetical protein | phrog_9199 | unknown function | unknown function | -1 | 28888 | 29073 |
| YP_008318225.1 | NC_021855_p23 | hypothetical protein | phrog_3874 | transglycosylase | other | -1 | 18200 | 18751 |
| YP_008318259.1 | NC_021855_p57 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31593 | 31784 |
| YP_008318241.1 | NC_021855_p39 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 23732 | 23947 |
| YP_008318254.1 | NC_021855_p52 | hypothetical protein | phrog_1656 | unknown function | unknown function | 1 | 29774 | 29968 |
| YP_008318209.1 | NC_021855_p7 | hypothetical protein | phrog_1428 | head-tail connector protein | connector | 1 | 5522 | 5785 |
| YP_008318210.1 | NC_021855_p8 | hypothetical protein | phrog_1429 | virion structural protein | head and packaging | 1 | 5785 | 6099 |
| YP_008318233.1 | NC_021855_p31 | hypothetical protein | phrog_6037 | unknown function | unknown function | -1 | 20760 | 20957 |
| YP_008318231.1 | NC_021855_p29 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 20180 | 20434 |
| YP_008318206.1 | NC_021855_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2656 | 3810 |
| YP_008318251.1 | NC_021855_p49 | hypothetical protein | phrog_18661 | unknown function | unknown function | -1 | 28460 | 28873 |
| YP_008318208.1 | NC_021855_p6 | hypothetical protein | phrog_1393 | minor head protein | head and packaging | 1 | 4320 | 5501 |
| YP_008318253.1 | NC_021855_p51 | hypothetical protein | phrog_2413 | unknown function | unknown function | -1 | 29564 | 29683 |
| YP_008318215.1 | NC_021855_p13 | hypothetical protein | phrog_5983 | tail protein | tail | 1 | 9747 | 10364 |
| YP_008318227.1 | NC_021855_p25 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 19053 | 19322 |
| YP_008318216.1 | NC_021855_p14 | hypothetical protein | phrog_1420 | virion structural protein | head and packaging | 1 | 10381 | 10656 |
| YP_008318214.1 | NC_021855_p12 | hypothetical protein | phrog_1433 | major tail protein | tail | 1 | 8840 | 9745 |
| YP_008318213.1 | NC_021855_p11 | hypothetical protein | phrog_28468 | minor head protein | head and packaging | 1 | 6850 | 8775 |
| YP_008318230.1 | NC_021855_p28 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 20011 | 20187 |
| YP_008318223.1 | NC_021855_p21 | holin | phrog_1379 | unknown function | unknown function | 1 | 17050 | 17403 |
| YP_008318224.1 | NC_021855_p22 | endolysin | phrog_670 | endolysin | lysis | 1 | 17400 | 18107 |
| YP_008318258.1 | NC_021855_p56 | hypothetical protein | phrog_1652 | unknown function | unknown function | 1 | 31151 | 31318 |
| YP_008318207.1 | NC_021855_p5 | prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 3791 | 4327 |
| YP_008318249.1 | NC_021855_p47 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 27802 | 28239 |
| YP_008318248.1 | NC_021855_p46 | DNA polymerase | phrog_1284 | unknown function | unknown function | -1 | 26868 | 27815 |