Genomic map of Lactococcus phage BM13 (NC_021861)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021861
Definition
Lactococcus phage BM13, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
30910
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
55
%GC
35.98
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008320151.1 NC_021861_p9 hypothetical protein phrog_5450 unknown function unknown function 1 3704 3940
YP_008320159.1 NC_021861_p17 hypothetical protein phrog_3109 unknown function unknown function 1 7846 8085
YP_008320190.1 NC_021861_p48 tape measure protein phrog_58 tail length tape measure protein tail 1 23595 25796
YP_008320158.1 NC_021861_p16 resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 7454 7843
YP_008320184.1 NC_021861_p42 structural protein phrog_1059 head-tail adaptor connector 1 20931 21251
YP_008320183.1 NC_021861_p41 structural protein phrog_1236 head protein head and packaging 1 20363 20929
YP_008320178.1 NC_021861_p36 minor head protein phrog_115 minor head protein head and packaging 1 17156 18205
YP_008320164.1 NC_021861_p22 hypothetical protein phrog_121 unknown function unknown function 1 9574 10122
YP_008320148.1 NC_021861_p6 hypothetical protein phrog_2899 anti-repressor Ant transcription regulation 1 2382 2702
YP_008320147.1 NC_021861_p5 repressor phrog_3 transcriptional repressor transcription regulation 1 2127 2369
YP_008320186.1 NC_021861_p44 structural protein phrog_957 head protein head and packaging 1 21675 22046
YP_008320179.1 NC_021861_p37 hypothetical protein phrog_35720 unknown function unknown function 1 18183 18317
YP_008320174.1 NC_021861_p32 transcriptional activator phrog_2198 Alt-like transcription activator transcription regulation 1 13527 13937
YP_008320168.1 NC_021861_p26 hypothetical protein phrog_4000 unknown function unknown function 1 11340 11882
YP_008320166.1 NC_021861_p24 dUTPase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 10691 11110
YP_008320150.1 NC_021861_p8 hypothetical protein phrog_9675 unknown function unknown function 1 3465 3659
YP_008320170.1 NC_021861_p28 hypothetical protein phrog_4501 unknown function unknown function 1 12598 12843
YP_008320182.1 NC_021861_p40 major head protein phrog_840 major head protein head and packaging 1 19331 20227
YP_008320169.1 NC_021861_p27 hypothetical protein phrog_1071 DNA methyltransferase other 1 11909 12601
YP_008320144.1 NC_021861_p2 anti-repressor phrog_373 anti-repressor transcription regulation 1 378 1094
YP_008320193.1 NC_021861_p51 base plate phrog_1220 head protein head and packaging 1 27785 28813
YP_008320167.1 NC_021861_p25 hypothetical protein phrog_21466 unknown function unknown function 1 11183 11335
YP_008320175.1 NC_021861_p33 hypothetical protein phrog_2538 terminase small subunit head and packaging 1 14089 14499
YP_008320197.1 NC_021861_p55 hypothetical protein phrog_11039 unknown function unknown function 1 30705 30905
YP_008320181.1 NC_021861_p39 hypothetical protein phrog_13508 unknown function unknown function 1 19073 19315
YP_008320196.1 NC_021861_p54 endolysin phrog_291 endolysin lysis 1 29340 30629
YP_008320157.1 NC_021861_p15 hypothetical protein phrog_2108 unknown function unknown function 1 7300 7464
YP_008320180.1 NC_021861_p38 scaffold structural protein phrog_194 head scaffolding protein head and packaging 1 18459 19061
YP_008320152.1 NC_021861_p10 hypothetical protein phrog_4729 unknown function unknown function 1 4039 4434
YP_008320188.1 NC_021861_p46 hypothetical protein phrog_1021 unknown function unknown function 1 22919 23266
YP_008320191.1 NC_021861_p49 tail protein phrog_33 distal tail protein Dit tail 1 25799 26671
YP_008320195.1 NC_021861_p53 holin phrog_881 holin lysis 1 29119 29343
YP_008320156.1 NC_021861_p14 helicase phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 6401 7291
YP_008320146.1 NC_021861_p4 hypothetical protein phrog_130 anti-repressor Ant transcription regulation 1 1314 1952
YP_008320155.1 NC_021861_p13 DNA replication protein phrog_1163 unknown function unknown function 1 5672 6391
YP_008320162.1 NC_021861_p20 hypothetical protein phrog_4149 unknown function unknown function 1 8726 9295
YP_008320153.1 NC_021861_p11 single strand annealing protein phrog_2324 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 4443 4958
YP_008320189.1 NC_021861_p47 hypothetical protein phrog_1294 peptide methionine sulfoxide reductase other 1 23365 23595
YP_008320149.1 NC_021861_p7 regulatory protein phrog_373 anti-repressor transcription regulation 1 2712 3452
YP_008320171.1 NC_021861_p29 hypothetical protein phrog_2670 unknown function unknown function 1 12840 13040
YP_008320176.1 NC_021861_p34 terminase large subunit phrog_38 terminase large subunit head and packaging 1 14489 15730
YP_008320160.1 NC_021861_p18 hypothetical protein phrog_5080 unknown function unknown function 1 8196 8402
YP_008320185.1 NC_021861_p43 structural protein phrog_5 tail completion or Neck1 protein connector 1 21256 21675
YP_008320165.1 NC_021861_p23 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 10122 10694
YP_008320154.1 NC_021861_p12 single strand DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 4972 5523
YP_008320163.1 NC_021861_p21 hypothetical protein phrog_8486 unknown function unknown function 1 9305 9577
YP_008320187.1 NC_021861_p45 major tail protein phrog_885 major tail protein tail 1 22046 22894
YP_008320161.1 NC_021861_p19 hypothetical protein phrog_4314 unknown function unknown function 1 8557 8736
YP_008320172.1 NC_021861_p30 hypothetical protein phrog_8817 unknown function unknown function 1 13048 13233
YP_008320177.1 NC_021861_p35 portal protein phrog_64 portal protein head and packaging 1 15730 17151
YP_008320192.1 NC_021861_p50 structural protein phrog_538 minor tail protein tail 1 26673 27788
YP_008320145.1 NC_021861_p3 hypothetical protein phrog_15116 unknown function unknown function 1 1108 1302
YP_008320143.1 NC_021861_p1 cro-like repressor phrog_3 transcriptional repressor transcription regulation 1 127 351
YP_008320173.1 NC_021861_p31 hypothetical protein phrog_21465 unknown function unknown function 1 13237 13449
YP_008320194.1 NC_021861_p52 hypothetical protein phrog_6453 unknown function unknown function 1 28827 29129