Genomic map of Paenibacillus phage phiIBB_Pl23 (NC_021865)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021865
Definition
Paenibacillus phage phiIBB_Pl23, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
41294
Host Name
Paenibacillus larvae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
68
%GC
40.93
Number of singletons
8
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008320386.1 NC_021865_p50 beta-lactamase phrog_392 metal-dependent hydrolase other 1 32032 32790
YP_008320372.1 NC_021865_p36 hypothetical protein singleton unknown function unknown function 1 25657 25884
YP_008320368.1 NC_021865_p32 hypothetical protein singleton unknown function unknown function 1 22525 22767
YP_008320385.1 NC_021865_p49 recombinational DNA repair protein RecT phrog_2780 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 31105 32019
YP_008320343.1 NC_021865_p7 head-tail connector protein phrog_40 head-tail adaptor Ad1 connector 1 5297 5560
YP_008320340.1 NC_021865_p4 Clp protease-like protein phrog_94 head maturation protease head and packaging 1 3310 4026
YP_008320341.1 NC_021865_p5 major capsid protein phrog_10 major head protein head and packaging 1 4023 5153
YP_008320392.1 NC_021865_p56 hypothetical protein phrog_19477 unknown function unknown function 1 35755 35961
YP_008320377.1 NC_021865_p41 hypothetical protein phrog_13275 unknown function unknown function 1 27014 27187
YP_008320351.1 NC_021865_p15 tail protein phrog_33 distal tail protein Dit tail 1 10413 11279
YP_008320337.1 NC_021865_p1 terminase small subunit phrog_361 terminase small subunit head and packaging 1 30 365
YP_008320352.1 NC_021865_p16 hypothetical protein phrog_538 minor tail protein tail 1 11282 12400
YP_008320380.1 NC_021865_p44 hypothetical protein phrog_20330 unknown function unknown function -1 28394 28750
YP_008320369.1 NC_021865_p33 recombination protein phrog_95 integrase integration and excision -1 22863 24467
YP_008320357.1 NC_021865_p21 N-acetylmuramoyl-L-alanine amidase phrog_3088 amidase lysis 1 14205 14879
YP_008320389.1 NC_021865_p53 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 33906 35234
YP_008320387.1 NC_021865_p51 hypothetical protein phrog_7503 unknown function unknown function 1 32787 33101
YP_008320401.1 NC_021865_p65 hypothetical protein phrog_497 toxin-antitoxin system HicB-like moron, auxiliary metabolic gene and host takeover -1 39095 39517
YP_008320397.1 NC_021865_p61 hypothetical protein phrog_6998 unknown function unknown function 1 37080 37292
YP_008320346.1 NC_021865_p10 hypothetical protein phrog_176 tail terminator connector 1 6286 6681
YP_008320379.1 NC_021865_p43 hypothetical protein phrog_12825 unknown function unknown function 1 27941 28423
YP_008320363.1 NC_021865_p27 toxin 1 phrog_37443 toxin moron, auxiliary metabolic gene and host takeover 1 18227 21154
YP_008320365.1 NC_021865_p29 hypothetical protein singleton unknown function unknown function 1 21617 21796
YP_008320374.1 NC_021865_p38 hypothetical protein phrog_22780 unknown function unknown function 1 26216 26419
YP_008320400.1 NC_021865_p64 ArpU family phage transcriptional regulator phrog_248 transcriptional activator transcription regulation 1 38515 38955
YP_008320342.1 NC_021865_p6 hypothetical protein phrog_6793 unknown function unknown function 1 5131 5304
YP_008320373.1 NC_021865_p37 hypothetical protein phrog_13817 unknown function unknown function 1 25926 26195
YP_008320370.1 NC_021865_p34 SOS-response repressor and protease LexA phrog_4 transcriptional repressor transcription regulation -1 24470 25153
YP_008320338.1 NC_021865_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 340 2070
YP_008320376.1 NC_021865_p40 hypothetical protein phrog_10535 unknown function unknown function 1 26800 27030
YP_008320358.1 NC_021865_p22 hypothetical protein phrog_419 unknown function unknown function 1 14876 15151
YP_008320403.1 NC_021865_p66 hypothetical protein phrog_1315 unknown function unknown function 1 40498 40911
YP_008320360.1 NC_021865_p24 hypothetical protein phrog_37984 unknown function unknown function 1 15605 16573
YP_008320367.1 NC_021865_p31 hypothetical protein singleton unknown function unknown function 1 22276 22422
YP_008320390.1 NC_021865_p54 hypothetical protein phrog_6868 unknown function unknown function 1 35237 35542
YP_008320348.1 NC_021865_p12 hypothetical protein phrog_7902 unknown function unknown function 1 7117 7464
YP_008320405.1 NC_021865_p68 hypothetical protein singleton unknown function unknown function 1 41129 41248
YP_008320383.1 NC_021865_p47 hypothetical protein phrog_1499 unknown function unknown function 1 29379 30908
YP_008320391.1 NC_021865_p55 hypothetical protein phrog_25160 unknown function unknown function 1 35557 35706
YP_008320384.1 NC_021865_p48 hypothetical protein phrog_5189 unknown function unknown function 1 30905 31102
YP_008320399.1 NC_021865_p63 hypothetical protein phrog_5494 unknown function unknown function 1 38006 38464
YP_008320395.1 NC_021865_p59 hypothetical protein phrog_19268 unknown function unknown function 1 36781 36972
YP_008320350.1 NC_021865_p14 tail length tape-measure protein phrog_58 tail length tape measure protein tail 1 7795 10431
YP_008320359.1 NC_021865_p23 hypothetical protein phrog_1299 holin lysis 1 15164 15418
YP_008320364.2 NC_021865_p28 hypothetical protein phrog_14009 unknown function unknown function -1 21190 21471
YP_008320396.1 NC_021865_p60 hypothetical protein singleton unknown function unknown function 1 36965 37090
YP_008320393.1 NC_021865_p57 hypothetical protein phrog_98 unknown function unknown function 1 35927 36370
YP_008320381.1 NC_021865_p45 hypothetical protein phrog_8406 unknown function unknown function 1 28831 29100
YP_008320404.1 NC_021865_p67 HNH endonuclease singleton unknown function unknown function 1 40911 41156
YP_008320388.1 NC_021865_p52 hypothetical protein phrog_2514 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 33116 33946
YP_008320344.1 NC_021865_p8 head-tail joining protein phrog_25 head closure Hc1 connector 1 5557 5874
YP_008320378.1 NC_021865_p42 antirepressor protein phrog_130 anti-repressor Ant transcription regulation 1 27192 27944
YP_008320349.1 NC_021865_p13 hypothetical protein phrog_7848 unknown function unknown function 1 7481 7735
YP_008320356.1 NC_021865_p20 hypothetical protein phrog_2429 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 13966 14205
YP_008320339.1 NC_021865_p3 portal protein phrog_12 portal protein head and packaging 1 2085 3320
YP_008320347.1 NC_021865_p11 major tail protein phrog_1407 major tail protein tail 1 6683 7120
YP_008320394.1 NC_021865_p58 transcriptional regulator phrog_8 transcriptional regulator transcription regulation 1 36367 36729
YP_008320355.1 NC_021865_p19 hypothetical protein phrog_134 unknown function unknown function 1 13824 13985
YP_008320366.1 NC_021865_p30 hypothetical protein singleton unknown function unknown function 1 22109 22240
YP_008320382.1 NC_021865_p46 hypothetical protein phrog_8288 unknown function unknown function 1 29105 29395
YP_008320353.1 NC_021865_p17 tail protein phrog_5339 virion structural protein head and packaging 1 12406 13479
YP_008320375.1 NC_021865_p39 hypothetical protein phrog_13601 unknown function unknown function 1 26426 26803
YP_008320371.1 NC_021865_p35 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 25266 25511
YP_008320398.1 NC_021865_p62 RuvC-like protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 37289 37846
YP_008320345.1 NC_021865_p9 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 5874 6302
YP_008320361.1 NC_021865_p25 hypothetical protein phrog_33512 unknown function unknown function 1 16593 16979
YP_008320354.1 NC_021865_p18 hypothetical protein phrog_6220 unknown function unknown function 1 13489 13827
YP_008320362.1 NC_021865_p26 hypothetical protein phrog_35861 unknown function unknown function 1 16994 17374