| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_021865 |
Definition |
Paenibacillus phage phiIBB_Pl23, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
41294 |
Host Name |
Paenibacillus larvae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
68 |
%GC |
40.93 |
Number of singletons |
8 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008320386.1 | NC_021865_p50 | beta-lactamase | phrog_392 | metal-dependent hydrolase | other | 1 | 32032 | 32790 |
| YP_008320372.1 | NC_021865_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25657 | 25884 |
| YP_008320368.1 | NC_021865_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22525 | 22767 |
| YP_008320385.1 | NC_021865_p49 | recombinational DNA repair protein RecT | phrog_2780 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 31105 | 32019 |
| YP_008320343.1 | NC_021865_p7 | head-tail connector protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 5297 | 5560 |
| YP_008320340.1 | NC_021865_p4 | Clp protease-like protein | phrog_94 | head maturation protease | head and packaging | 1 | 3310 | 4026 |
| YP_008320341.1 | NC_021865_p5 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4023 | 5153 |
| YP_008320392.1 | NC_021865_p56 | hypothetical protein | phrog_19477 | unknown function | unknown function | 1 | 35755 | 35961 |
| YP_008320377.1 | NC_021865_p41 | hypothetical protein | phrog_13275 | unknown function | unknown function | 1 | 27014 | 27187 |
| YP_008320351.1 | NC_021865_p15 | tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 10413 | 11279 |
| YP_008320337.1 | NC_021865_p1 | terminase small subunit | phrog_361 | terminase small subunit | head and packaging | 1 | 30 | 365 |
| YP_008320352.1 | NC_021865_p16 | hypothetical protein | phrog_538 | minor tail protein | tail | 1 | 11282 | 12400 |
| YP_008320380.1 | NC_021865_p44 | hypothetical protein | phrog_20330 | unknown function | unknown function | -1 | 28394 | 28750 |
| YP_008320369.1 | NC_021865_p33 | recombination protein | phrog_95 | integrase | integration and excision | -1 | 22863 | 24467 |
| YP_008320357.1 | NC_021865_p21 | N-acetylmuramoyl-L-alanine amidase | phrog_3088 | amidase | lysis | 1 | 14205 | 14879 |
| YP_008320389.1 | NC_021865_p53 | replicative DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 33906 | 35234 |
| YP_008320387.1 | NC_021865_p51 | hypothetical protein | phrog_7503 | unknown function | unknown function | 1 | 32787 | 33101 |
| YP_008320401.1 | NC_021865_p65 | hypothetical protein | phrog_497 | toxin-antitoxin system HicB-like | moron, auxiliary metabolic gene and host takeover | -1 | 39095 | 39517 |
| YP_008320397.1 | NC_021865_p61 | hypothetical protein | phrog_6998 | unknown function | unknown function | 1 | 37080 | 37292 |
| YP_008320346.1 | NC_021865_p10 | hypothetical protein | phrog_176 | tail terminator | connector | 1 | 6286 | 6681 |
| YP_008320379.1 | NC_021865_p43 | hypothetical protein | phrog_12825 | unknown function | unknown function | 1 | 27941 | 28423 |
| YP_008320363.1 | NC_021865_p27 | toxin 1 | phrog_37443 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 18227 | 21154 |
| YP_008320365.1 | NC_021865_p29 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21617 | 21796 |
| YP_008320374.1 | NC_021865_p38 | hypothetical protein | phrog_22780 | unknown function | unknown function | 1 | 26216 | 26419 |
| YP_008320400.1 | NC_021865_p64 | ArpU family phage transcriptional regulator | phrog_248 | transcriptional activator | transcription regulation | 1 | 38515 | 38955 |
| YP_008320342.1 | NC_021865_p6 | hypothetical protein | phrog_6793 | unknown function | unknown function | 1 | 5131 | 5304 |
| YP_008320373.1 | NC_021865_p37 | hypothetical protein | phrog_13817 | unknown function | unknown function | 1 | 25926 | 26195 |
| YP_008320370.1 | NC_021865_p34 | SOS-response repressor and protease LexA | phrog_4 | transcriptional repressor | transcription regulation | -1 | 24470 | 25153 |
| YP_008320338.1 | NC_021865_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 340 | 2070 |
| YP_008320376.1 | NC_021865_p40 | hypothetical protein | phrog_10535 | unknown function | unknown function | 1 | 26800 | 27030 |
| YP_008320358.1 | NC_021865_p22 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 14876 | 15151 |
| YP_008320403.1 | NC_021865_p66 | hypothetical protein | phrog_1315 | unknown function | unknown function | 1 | 40498 | 40911 |
| YP_008320360.1 | NC_021865_p24 | hypothetical protein | phrog_37984 | unknown function | unknown function | 1 | 15605 | 16573 |
| YP_008320367.1 | NC_021865_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22276 | 22422 |
| YP_008320390.1 | NC_021865_p54 | hypothetical protein | phrog_6868 | unknown function | unknown function | 1 | 35237 | 35542 |
| YP_008320348.1 | NC_021865_p12 | hypothetical protein | phrog_7902 | unknown function | unknown function | 1 | 7117 | 7464 |
| YP_008320405.1 | NC_021865_p68 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41129 | 41248 |
| YP_008320383.1 | NC_021865_p47 | hypothetical protein | phrog_1499 | unknown function | unknown function | 1 | 29379 | 30908 |
| YP_008320391.1 | NC_021865_p55 | hypothetical protein | phrog_25160 | unknown function | unknown function | 1 | 35557 | 35706 |
| YP_008320384.1 | NC_021865_p48 | hypothetical protein | phrog_5189 | unknown function | unknown function | 1 | 30905 | 31102 |
| YP_008320399.1 | NC_021865_p63 | hypothetical protein | phrog_5494 | unknown function | unknown function | 1 | 38006 | 38464 |
| YP_008320395.1 | NC_021865_p59 | hypothetical protein | phrog_19268 | unknown function | unknown function | 1 | 36781 | 36972 |
| YP_008320350.1 | NC_021865_p14 | tail length tape-measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 7795 | 10431 |
| YP_008320359.1 | NC_021865_p23 | hypothetical protein | phrog_1299 | holin | lysis | 1 | 15164 | 15418 |
| YP_008320364.2 | NC_021865_p28 | hypothetical protein | phrog_14009 | unknown function | unknown function | -1 | 21190 | 21471 |
| YP_008320396.1 | NC_021865_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36965 | 37090 |
| YP_008320393.1 | NC_021865_p57 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 35927 | 36370 |
| YP_008320381.1 | NC_021865_p45 | hypothetical protein | phrog_8406 | unknown function | unknown function | 1 | 28831 | 29100 |
| YP_008320404.1 | NC_021865_p67 | HNH endonuclease | singleton | unknown function | unknown function | 1 | 40911 | 41156 |
| YP_008320388.1 | NC_021865_p52 | hypothetical protein | phrog_2514 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 33116 | 33946 |
| YP_008320344.1 | NC_021865_p8 | head-tail joining protein | phrog_25 | head closure Hc1 | connector | 1 | 5557 | 5874 |
| YP_008320378.1 | NC_021865_p42 | antirepressor protein | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 27192 | 27944 |
| YP_008320349.1 | NC_021865_p13 | hypothetical protein | phrog_7848 | unknown function | unknown function | 1 | 7481 | 7735 |
| YP_008320356.1 | NC_021865_p20 | hypothetical protein | phrog_2429 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 13966 | 14205 |
| YP_008320339.1 | NC_021865_p3 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2085 | 3320 |
| YP_008320347.1 | NC_021865_p11 | major tail protein | phrog_1407 | major tail protein | tail | 1 | 6683 | 7120 |
| YP_008320394.1 | NC_021865_p58 | transcriptional regulator | phrog_8 | transcriptional regulator | transcription regulation | 1 | 36367 | 36729 |
| YP_008320355.1 | NC_021865_p19 | hypothetical protein | phrog_134 | unknown function | unknown function | 1 | 13824 | 13985 |
| YP_008320366.1 | NC_021865_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22109 | 22240 |
| YP_008320382.1 | NC_021865_p46 | hypothetical protein | phrog_8288 | unknown function | unknown function | 1 | 29105 | 29395 |
| YP_008320353.1 | NC_021865_p17 | tail protein | phrog_5339 | virion structural protein | head and packaging | 1 | 12406 | 13479 |
| YP_008320375.1 | NC_021865_p39 | hypothetical protein | phrog_13601 | unknown function | unknown function | 1 | 26426 | 26803 |
| YP_008320371.1 | NC_021865_p35 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 25266 | 25511 |
| YP_008320398.1 | NC_021865_p62 | RuvC-like protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 37289 | 37846 |
| YP_008320345.1 | NC_021865_p9 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 5874 | 6302 |
| YP_008320361.1 | NC_021865_p25 | hypothetical protein | phrog_33512 | unknown function | unknown function | 1 | 16593 | 16979 |
| YP_008320354.1 | NC_021865_p18 | hypothetical protein | phrog_6220 | unknown function | unknown function | 1 | 13489 | 13827 |
| YP_008320362.1 | NC_021865_p26 | hypothetical protein | phrog_35861 | unknown function | unknown function | 1 | 16994 | 17374 |