Genomic map of Streptococcus phage SPQS1 (NC_021868)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021868
Definition
Streptococcus phage SP-QS1 complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Saphexavirus.
DB of origin
REFSEQ
Length
58305
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
104
%GC
39.87
Number of singletons
7
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008320555.1 NC_021868_p78 hypothetical protein phrog_13322 unknown function unknown function 1 48402 48788
YP_008320499.1 NC_021868_p22 N-acetylmuramoyl-L-alanine amidase phrog_7887 endolysin lysis 1 20925 21638
YP_008320505.1 NC_021868_p28 hypothetical protein phrog_7571 unknown function unknown function 1 24561 24761
YP_008320479.1 NC_021868_p2 hypothetical protein phrog_15507 unknown function unknown function 1 653 997
YP_008320566.1 NC_021868_p89 hypothetical protein singleton unknown function unknown function 1 51889 52002
YP_008320528.1 NC_021868_p51 LPS glycosyltransferase phrog_12231 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 35873 36436
YP_008320493.1 NC_021868_p16 hypothetical protein phrog_14263 unknown function unknown function 1 10168 10392
YP_008320554.1 NC_021868_p77 hypothetical protein phrog_33931 unknown function unknown function 1 48294 48398
YP_008320495.1 NC_021868_p18 phage tail fiber protein singleton unknown function unknown function 1 13304 14863
YP_008320524.1 NC_021868_p47 hypothetical protein phrog_13759 unknown function unknown function 1 33689 34021
YP_008320521.1 NC_021868_p44 hypothetical protein phrog_32233 unknown function unknown function 1 31895 32155
YP_008320550.1 NC_021868_p73 hypothetical protein phrog_14163 unknown function unknown function 1 45609 45896
YP_008320548.1 NC_021868_p71 hypothetical protein phrog_13735 unknown function unknown function 1 45135 45326
YP_008320492.1 NC_021868_p15 hypothetical protein phrog_14243 unknown function unknown function 1 9717 10157
YP_008320541.1 NC_021868_p64 cytidine deaminase phrog_3523 unknown function unknown function 1 42575 43207
YP_008320491.1 NC_021868_p14 major tail protein phrog_41 major tail protein tail 1 8884 9573
YP_008320540.1 NC_021868_p63 hypothetical protein phrog_3784 unknown function unknown function 1 42113 42574
YP_008320515.1 NC_021868_p38 hypothetical protein singleton unknown function unknown function 1 28253 28372
YP_008320502.1 NC_021868_p25 hypothetical protein phrog_6883 unknown function unknown function 1 22861 23685
YP_008320579.1 NC_021868_p102 hypothetical protein phrog_14024 unknown function unknown function -1 57107 57493
YP_008320507.1 NC_021868_p30 hypothetical protein phrog_13247 unknown function unknown function 1 24921 25046
YP_008320563.1 NC_021868_p86 hypothetical protein phrog_37991 unknown function unknown function 1 50582 50902
YP_008320537.1 NC_021868_p60 hypothetical protein phrog_7488 unknown function unknown function 1 40448 40969
YP_008320539.1 NC_021868_p62 ATP-dependent metalloprotease phrog_13838 ATP-dependent protease other 1 41359 42054
YP_008320527.1 NC_021868_p50 hypothetical protein phrog_14385 unknown function unknown function 1 35149 35781
YP_008320523.1 NC_021868_p46 hypothetical protein phrog_1706 CRISPR/Cas system associated DNA, RNA and nucleotide metabolism 1 32661 33689
YP_008320531.1 NC_021868_p54 hypothetical protein phrog_13949 unknown function unknown function 1 36775 36999
YP_008320544.1 NC_021868_p67 hypothetical protein phrog_13364 unknown function unknown function 1 43928 44116
YP_008320510.1 NC_021868_p33 hypothetical protein phrog_1150 unknown function unknown function 1 26412 26744
YP_008320503.1 NC_021868_p26 hypothetical protein phrog_13813 unknown function unknown function 1 23738 24172
YP_008320581.1 NC_021868_p104 hypothetical protein phrog_13680 unknown function unknown function -1 57750 58064
YP_008320496.1 NC_021868_p19 phage tail fiber protein phrog_14260 tail protein tail 1 15040 17538
YP_008320487.1 NC_021868_p10 hypothetical protein phrog_132 head-tail adaptor connector 1 7254 7658
YP_008320547.1 NC_021868_p70 hypothetical protein phrog_37175 unknown function unknown function 1 44930 45145
YP_008320546.1 NC_021868_p69 hypothetical protein phrog_10028 unknown function unknown function 1 44673 44930
YP_008320518.1 NC_021868_p41 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 29564 30928
YP_008320561.1 NC_021868_p84 hypothetical protein phrog_16617 unknown function unknown function 1 50104 50313
YP_008320552.1 NC_021868_p75 nucleoside triphosphate pyrophosphohydrolase phrog_715 MazG-like pyrophosphatase other 1 46907 47212
YP_008320562.1 NC_021868_p85 hypothetical protein phrog_5861 unknown function unknown function 1 50387 50557
YP_008320478.1 NC_021868_p1 phage terminase small subunit phrog_51 terminase small subunit head and packaging 1 40 639
YP_008320489.1 NC_021868_p12 hypothetical protein phrog_13043 unknown function unknown function 1 8036 8416
YP_008320580.1 NC_021868_p103 hypothetical protein phrog_15663 unknown function unknown function -1 57493 57750
YP_008320574.1 NC_021868_p97 hypothetical protein phrog_13778 ABC transporter moron, auxiliary metabolic gene and host takeover -1 55547 55912
YP_008320525.1 NC_021868_p48 crossover junction endodeoxyribonuclease RuvC phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 34021 34590
YP_008320520.1 NC_021868_p43 hypothetical protein phrog_14383 unknown function unknown function 1 31659 31883
YP_008320484.1 NC_021868_p7 hypothetical protein phrog_172 head scaffolding protein head and packaging 1 5068 5739
YP_008320557.1 NC_021868_p80 hypothetical protein phrog_13537 unknown function unknown function 1 49234 49371
YP_008320549.1 NC_021868_p72 hypothetical protein singleton unknown function unknown function 1 45329 45637
YP_008320500.1 NC_021868_p23 hypothetical protein phrog_6154 unknown function unknown function -1 21922 22395
YP_008320526.1 NC_021868_p49 adenylate kinase phrog_139 deoxynucleoside monophosphate kinase other 1 34587 35156
YP_008320542.1 NC_021868_p65 hypothetical protein phrog_14376 unknown function unknown function 1 43219 43425
YP_008320568.1 NC_021868_p91 hypothetical protein phrog_32821 unknown function unknown function -1 52498 52818
YP_008320577.1 NC_021868_p100 hypothetical protein phrog_4188 unknown function unknown function -1 56521 56658
YP_008320490.1 NC_021868_p13 phage tail protein phrog_176 tail terminator connector 1 8429 8863
YP_008320569.1 NC_021868_p92 hypothetical protein phrog_15076 unknown function unknown function -1 52818 52958
YP_008320575.1 NC_021868_p98 hypothetical protein phrog_18442 unknown function unknown function -1 55932 56234
YP_008320497.1 NC_021868_p20 phage minor structural protein phrog_12329 virion structural protein head and packaging 1 17551 20577
YP_008320481.1 NC_021868_p4 phage terminase large subunit phrog_2 terminase large subunit head and packaging 1 1327 2598
YP_008320535.1 NC_021868_p58 hypothetical protein phrog_13304 unknown function unknown function 1 37798 37983
YP_008320504.1 NC_021868_p27 hypothetical protein phrog_12542 unknown function unknown function 1 24175 24561
YP_008320501.1 NC_021868_p24 hypothetical protein phrog_28128 unknown function unknown function 1 22419 22562
YP_008320488.1 NC_021868_p11 hypothetical protein phrog_13654 unknown function unknown function 1 7674 8051
YP_008320571.1 NC_021868_p94 hypothetical protein phrog_15285 unknown function unknown function -1 53349 53567
YP_008320578.1 NC_021868_p101 methyltransferase phrog_13576 methyltransferase other -1 56728 57105
YP_008320508.1 NC_021868_p31 hypothetical protein phrog_6234 host RecBCD nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 26021 26167
YP_008320509.1 NC_021868_p32 hypothetical protein phrog_13036 unknown function unknown function 1 26167 26412
YP_008320530.1 NC_021868_p53 hypothetical protein phrog_16961 unknown function unknown function 1 36566 36760
YP_008320506.1 NC_021868_p29 hypothetical protein phrog_13247 unknown function unknown function 1 24906 25046
YP_008320485.1 NC_021868_p8 major head protein phrog_544 major head protein head and packaging 1 5793 6599
YP_008320565.1 NC_021868_p88 hypothetical protein phrog_12898 unknown function unknown function 1 51412 51714
YP_008320570.1 NC_021868_p93 hypothetical protein phrog_13641 unknown function unknown function -1 53135 53347
YP_008320486.1 NC_021868_p9 major tail protein phrog_341 major tail protein tail 1 6754 7194
YP_008320573.1 NC_021868_p96 hypothetical protein phrog_20226 unknown function unknown function -1 54437 55102
YP_008320514.1 NC_021868_p37 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 27352 28299
YP_008320483.1 NC_021868_p6 phage head morphogenesis protein phrog_8089 head morphogenesis head and packaging 1 4202 4957
YP_008320522.1 NC_021868_p45 HNH endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 32228 32668
YP_008320576.1 NC_021868_p99 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 56236 56496
YP_008320536.1 NC_021868_p59 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 38062 40413
YP_008320551.1 NC_021868_p74 hypothetical protein phrog_548 RNA ligase DNA, RNA and nucleotide metabolism 1 45898 46860
YP_008320480.1 NC_021868_p3 hypothetical protein phrog_1299 holin lysis 1 1016 1264
YP_008320543.1 NC_021868_p66 hypothetical protein phrog_9042 unknown function unknown function 1 43439 43849
YP_008320519.1 NC_021868_p42 DNA methylase phrog_2882 DNA methyltransferase other 1 30941 31693
YP_008320482.1 NC_021868_p5 phage portal protein phrog_64 portal protein head and packaging 1 2655 4190
YP_008320516.1 NC_021868_p39 transcriptional regulator phrog_323 transcriptional regulator, D5-like transcription regulation 1 28374 28727
YP_008320498.1 NC_021868_p21 hypothetical protein phrog_7298 unknown function unknown function 1 20591 20878
YP_008320512.1 NC_021868_p35 hypothetical protein phrog_14109 unknown function unknown function 1 26910 27098
YP_008320558.1 NC_021868_p81 hypothetical protein singleton unknown function unknown function 1 49435 49662
YP_008320572.1 NC_021868_p95 hypothetical protein phrog_12919 unknown function unknown function -1 53568 54401
YP_008320529.1 NC_021868_p52 hypothetical protein phrog_15146 unknown function unknown function 1 36438 36554
YP_008320534.1 NC_021868_p57 hypothetical protein phrog_13373 unknown function unknown function 1 37421 37798
YP_008320553.1 NC_021868_p76 hypothetical protein phrog_14566 unknown function unknown function 1 47978 48301
YP_008320494.1 NC_021868_p17 minor capsid protein phrog_1533 tail length tape measure protein tail 1 10405 13290
YP_008320538.1 NC_021868_p61 hypothetical protein phrog_7488 unknown function unknown function 1 40971 41366
YP_008320559.1 NC_021868_p82 hypothetical protein singleton unknown function unknown function 1 49510 49662
YP_008320532.1 NC_021868_p55 hypothetical protein phrog_13437 unknown function unknown function 1 36996 37205
YP_008320556.1 NC_021868_p79 hypothetical protein phrog_12407 unknown function unknown function 1 48781 49155
YP_008320511.1 NC_021868_p34 hypothetical protein singleton unknown function unknown function 1 26744 26896
YP_008320564.1 NC_021868_p87 hypothetical protein phrog_33327 unknown function unknown function 1 50992 51303
YP_008320567.1 NC_021868_p90 hypothetical protein phrog_29780 unknown function unknown function -1 52099 52368
YP_008320513.1 NC_021868_p36 hypothetical protein phrog_30650 unknown function unknown function 1 27110 27322
YP_008320517.1 NC_021868_p40 DNA replication protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 28776 29552
YP_008320545.1 NC_021868_p68 HNH endonuclease family protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44116 44658
YP_008320560.1 NC_021868_p83 hypothetical protein phrog_8573 unknown function unknown function 1 49796 50089
YP_008320533.1 NC_021868_p56 hypothetical protein phrog_14036 unknown function unknown function 1 37208 37420