| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_022052 |
Definition |
Mycobacterium phage Whirlwind, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bronvirus; unclassified Bronvirus. |
DB of origin |
REFSEQ |
Length |
76050 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
128 |
%GC |
59.34 |
Number of singletons |
7 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008408675.1 | NC_022052_p17 | tape measure protein | phrog_3547 | tail length tape measure protein | tail | 1 | 10963 | 16158 |
| YP_008408759.1 | NC_022052_p101 | hypothetical protein | phrog_30279 | unknown function | unknown function | 1 | 62876 | 63058 |
| YP_008408707.1 | NC_022052_p49 | hypothetical protein | phrog_4870 | unknown function | unknown function | 1 | 39496 | 39891 |
| YP_008408744.1 | NC_022052_p86 | ClpP | phrog_94 | head maturation protease | head and packaging | 1 | 57664 | 58317 |
| YP_008408695.1 | NC_022052_p37 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 32933 | 33757 |
| YP_008408774.1 | NC_022052_p116 | hypothetical protein | singleton | unknown function | unknown function | -1 | 69506 | 69721 |
| YP_008408696.1 | NC_022052_p38 | hypothetical protein | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 33890 | 34372 |
| YP_008408786.1 | NC_022052_p128 | hypothetical protein | singleton | unknown function | unknown function | -1 | 74770 | 74928 |
| YP_008408694.1 | NC_022052_p36 | integrase | phrog_1 | integrase | integration and excision | 1 | 31644 | 32936 |
| YP_008408668.1 | NC_022052_p10 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 7365 | 7841 |
| YP_008408781.1 | NC_022052_p123 | AAA ATPase | phrog_249 | porphyrin biosynthesis | moron, auxiliary metabolic gene and host takeover | -1 | 72607 | 73815 |
| YP_008408733.1 | NC_022052_p75 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53341 | 53457 |
| YP_008408706.1 | NC_022052_p48 | band 7-like protein | phrog_200 | lipoprotein | other | 1 | 38392 | 39324 |
| YP_008408690.1 | NC_022052_p32 | hypothetical protein | phrog_6558 | unknown function | unknown function | -1 | 29110 | 29385 |
| YP_008408659.1 | NC_022052_p1 | hypothetical protein | phrog_7082 | unknown function | unknown function | 1 | 84 | 464 |
| YP_008408711.1 | NC_022052_p53 | Von Willebrand factor-like protein | phrog_850 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 40637 | 42076 |
| YP_008408679.1 | NC_022052_p21 | hypothetical protein | phrog_746 | minor tail protein | tail | 1 | 19481 | 21994 |
| YP_008408660.1 | NC_022052_p2 | hypothetical protein | phrog_1496 | terminase small subunit | head and packaging | 1 | 461 | 841 |
| YP_008408701.1 | NC_022052_p43 | hypothetical protein | phrog_5916 | unknown function | unknown function | 1 | 36292 | 36654 |
| YP_008408688.1 | NC_022052_p30 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 28115 | 28534 |
| YP_008408740.1 | NC_022052_p82 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 55415 | 55798 |
| YP_008408672.1 | NC_022052_p14 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 9117 | 10016 |
| YP_008408671.1 | NC_022052_p13 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 8608 | 9087 |
| YP_008408693.1 | NC_022052_p35 | hypothetical protein | phrog_17141 | unknown function | unknown function | -1 | 30755 | 31138 |
| YP_008408717.1 | NC_022052_p59 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 43832 | 44569 |
| YP_008408726.1 | NC_022052_p68 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 48014 | 49279 |
| YP_008408752.1 | NC_022052_p94 | DnaQ | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 60654 | 61436 |
| YP_008408662.1 | NC_022052_p4 | hypothetical protein | phrog_17068 | unknown function | unknown function | 1 | 1027 | 1185 |
| YP_008408691.1 | NC_022052_p33 | NrdC-like protein | phrog_388 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | -1 | 29395 | 30135 |
| YP_008408777.1 | NC_022052_p119 | hypothetical protein | phrog_6176 | unknown function | unknown function | 1 | 70350 | 70805 |
| YP_008408727.1 | NC_022052_p69 | hypothetical protein | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 49276 | 49557 |
| YP_008408785.1 | NC_022052_p127 | hypothetical protein | phrog_12614 | unknown function | unknown function | -1 | 74660 | 74773 |
| YP_008408704.1 | NC_022052_p46 | hypothetical protein | phrog_6017 | unknown function | unknown function | 1 | 37855 | 38169 |
| YP_008408722.1 | NC_022052_p64 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 46283 | 46615 |
| YP_008408698.1 | NC_022052_p40 | excise | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 34710 | 34925 |
| YP_008408735.1 | NC_022052_p77 | RusA | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 53633 | 54025 |
| YP_008408737.1 | NC_022052_p79 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 54302 | 54622 |
| YP_008408769.1 | NC_022052_p111 | hypothetical protein | phrog_1909 | unknown function | unknown function | -1 | 67390 | 68250 |
| YP_008408754.1 | NC_022052_p96 | hypothetical protein | phrog_397 | unknown function | unknown function | 1 | 61608 | 61742 |
| YP_008408702.1 | NC_022052_p44 | hypothetical protein | phrog_1649 | metallo-phosphoesterase | other | 1 | 36838 | 37647 |
| YP_008408721.1 | NC_022052_p63 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 45925 | 46296 |
| YP_008408743.1 | NC_022052_p85 | RNA ligase | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 56366 | 57664 |
| YP_008408770.1 | NC_022052_p112 | hypothetical protein | phrog_3777 | unknown function | unknown function | -1 | 68315 | 68695 |
| YP_008408756.1 | NC_022052_p98 | hypothetical protein | phrog_3699 | unknown function | unknown function | 1 | 62291 | 62521 |
| YP_008408745.1 | NC_022052_p87 | hypothetical protein | phrog_7495 | unknown function | unknown function | 1 | 58317 | 58862 |
| YP_008408700.1 | NC_022052_p42 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 35405 | 35812 |
| YP_008408738.1 | NC_022052_p80 | hypothetical protein | phrog_1941 | unknown function | unknown function | 1 | 54612 | 54866 |
| YP_008408771.1 | NC_022052_p113 | hypothetical protein | phrog_6224 | unknown function | unknown function | -1 | 68736 | 68933 |
| YP_008408736.1 | NC_022052_p78 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 53994 | 54305 |
| YP_008408669.1 | NC_022052_p11 | hypothetical protein | phrog_5309 | head-tail adaptor | connector | 1 | 7838 | 8176 |
| YP_008408683.1 | NC_022052_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24530 | 24700 |
| YP_008408753.1 | NC_022052_p95 | hypothetical protein | phrog_6821 | unknown function | unknown function | 1 | 61433 | 61633 |
| YP_008408778.1 | NC_022052_p120 | hypothetical protein | singleton | unknown function | unknown function | -1 | 70868 | 71077 |
| YP_008408715.1 | NC_022052_p57 | hypothetical protein | phrog_5858 | unknown function | unknown function | 1 | 43235 | 43411 |
| YP_008408767.1 | NC_022052_p109 | hypothetical protein | singleton | unknown function | unknown function | -1 | 66899 | 67138 |
| YP_008408766.1 | NC_022052_p108 | hypothetical protein | phrog_18249 | unknown function | unknown function | -1 | 66335 | 66784 |
| YP_008408730.1 | NC_022052_p72 | phosphoribosyl-pyrophosphate transferase | phrog_619 | ribose-phosphate pyrophosphokinase | other | 1 | 49987 | 50844 |
| YP_008408697.1 | NC_022052_p39 | DNA binding protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 34375 | 34713 |
| YP_008408725.1 | NC_022052_p67 | hypothetical protein | phrog_12888 | unknown function | unknown function | 1 | 47730 | 48017 |
| YP_008408732.1 | NC_022052_p74 | PNK protein | phrog_505 | polynucleotide kinase | other | 1 | 52406 | 53341 |
| YP_008408681.1 | NC_022052_p23 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 23231 | 23614 |
| YP_008408680.1 | NC_022052_p22 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 22004 | 23203 |
| YP_008408682.1 | NC_022052_p24 | hypothetical protein | phrog_3856 | minor tail protein | tail | 1 | 23626 | 24567 |
| YP_008408714.1 | NC_022052_p56 | hypothetical protein | phrog_17581 | unknown function | unknown function | 1 | 43105 | 43257 |
| YP_008408757.1 | NC_022052_p99 | hypothetical protein | phrog_6027 | unknown function | unknown function | 1 | 62514 | 62633 |
| YP_008408749.1 | NC_022052_p91 | HNH endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 59575 | 59982 |
| YP_008408686.1 | NC_022052_p28 | hypothetical protein | phrog_102 | endolysin | lysis | 1 | 26586 | 27629 |
| YP_008408666.1 | NC_022052_p8 | scaffolding protein | phrog_3760 | head scaffolding protein | head and packaging | 1 | 5535 | 6134 |
| YP_008408703.1 | NC_022052_p45 | hypothetical protein | phrog_17914 | unknown function | unknown function | 1 | 37647 | 37865 |
| YP_008408673.1 | NC_022052_p15 | tail assembly chaperone | phrog_2624 | tail assembly chaperone | tail | 1 | 10118 | 10934 |
| YP_008408705.1 | NC_022052_p47 | hypothetical protein | phrog_17191 | unknown function | unknown function | 1 | 38147 | 38320 |
| YP_008408761.1 | NC_022052_p103 | hypothetical protein | phrog_19018 | unknown function | unknown function | 1 | 63544 | 63717 |
| YP_008408758.1 | NC_022052_p100 | hypothetical protein | phrog_14116 | unknown function | unknown function | 1 | 62617 | 62892 |
| YP_008408719.1 | NC_022052_p61 | hypothetical protein | phrog_5917 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 45352 | 45624 |
| YP_008408762.1 | NC_022052_p104 | hypothetical protein | phrog_26254 | unknown function | unknown function | 1 | 64256 | 64522 |
| YP_008408734.1 | NC_022052_p76 | hypothetical protein | phrog_6064 | unknown function | unknown function | 1 | 53444 | 53632 |
| YP_008408667.1 | NC_022052_p9 | Capsid | phrog_283 | major head protein | head and packaging | 1 | 6194 | 7354 |
| YP_008408764.1 | NC_022052_p106 | hypothetical protein | phrog_6170 | unknown function | unknown function | 1 | 65524 | 65910 |
| YP_008408779.1 | NC_022052_p121 | hypothetical protein | phrog_1909 | unknown function | unknown function | -1 | 71331 | 72158 |
| YP_008408780.1 | NC_022052_p122 | hypothetical protein | phrog_29714 | unknown function | unknown function | -1 | 72335 | 72628 |
| YP_008408782.1 | NC_022052_p124 | hypothetical protein | singleton | unknown function | unknown function | -1 | 73873 | 74031 |
| YP_008408664.1 | NC_022052_p6 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2751 | 4391 |
| YP_008408742.1 | NC_022052_p84 | hypothetical protein | phrog_15155 | unknown function | unknown function | 1 | 56037 | 56369 |
| YP_008408718.1 | NC_022052_p60 | ERF-like protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 44582 | 45352 |
| YP_008408765.1 | NC_022052_p107 | hypothetical protein | phrog_20848 | unknown function | unknown function | -1 | 66084 | 66332 |
| YP_008408741.1 | NC_022052_p83 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 55822 | 56040 |
| YP_008408731.1 | NC_022052_p73 | NAPRTase | phrog_448 | nicotinamide phosphoribosyl transferase | other | 1 | 50844 | 52319 |
| YP_008408678.1 | NC_022052_p20 | minor tail subunit | phrog_4413 | minor tail protein | tail | 1 | 19032 | 19481 |
| YP_008408772.1 | NC_022052_p114 | hypothetical protein | phrog_7390 | unknown function | unknown function | -1 | 68941 | 69135 |
| YP_008408665.1 | NC_022052_p7 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 4408 | 5478 |
| YP_008408684.1 | NC_022052_p26 | LysA | phrog_317 | endolysin | lysis | 1 | 24700 | 26172 |
| YP_008408768.1 | NC_022052_p110 | hypothetical protein | phrog_6230 | unknown function | unknown function | -1 | 67131 | 67361 |
| YP_008408710.1 | NC_022052_p52 | hypothetical protein | phrog_1673 | unknown function | unknown function | 1 | 40389 | 40625 |
| YP_008408708.1 | NC_022052_p50 | hypothetical protein | phrog_2380 | unknown function | unknown function | 1 | 39888 | 40133 |
| YP_008408712.1 | NC_022052_p54 | secreted protein | phrog_301 | secreted protein | other | 1 | 42457 | 42798 |
| YP_008408677.1 | NC_022052_p19 | minor tail subunit | phrog_110 | minor tail protein | tail | 1 | 17130 | 18893 |
| YP_008408692.1 | NC_022052_p34 | Lsr2 | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 30230 | 30700 |
| YP_008408729.1 | NC_022052_p71 | hypothetical protein | phrog_6206 | unknown function | unknown function | 1 | 49853 | 50002 |
| YP_008408723.1 | NC_022052_p65 | hypothetical protein | phrog_2693 | unknown function | unknown function | 1 | 46596 | 47057 |
| YP_008408763.1 | NC_022052_p105 | hypothetical protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 64830 | 65531 |
| YP_008408784.1 | NC_022052_p126 | hypothetical protein | phrog_37726 | unknown function | unknown function | -1 | 74314 | 74538 |
| YP_008408746.1 | NC_022052_p88 | hypothetical protein | phrog_20980 | unknown function | unknown function | 1 | 58863 | 58967 |
| YP_008408676.1 | NC_022052_p18 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 16247 | 17137 |
| YP_008408661.1 | NC_022052_p3 | hypothetical protein | phrog_18572 | unknown function | unknown function | 1 | 858 | 1034 |
| YP_008408783.1 | NC_022052_p125 | hypothetical protein | phrog_28370 | unknown function | unknown function | -1 | 74093 | 74260 |
| YP_008408687.1 | NC_022052_p29 | hypothetical protein | phrog_5963 | holin | lysis | 1 | 27642 | 28112 |
| YP_008408748.1 | NC_022052_p90 | hypothetical protein | phrog_1969 | unknown function | unknown function | 1 | 59187 | 59525 |
| YP_008408685.1 | NC_022052_p27 | hypothetical protein | phrog_526 | holin | lysis | 1 | 26172 | 26585 |
| YP_008408720.1 | NC_022052_p62 | hypothetical protein | phrog_7527 | unknown function | unknown function | 1 | 45621 | 45932 |
| YP_008408689.1 | NC_022052_p31 | NrdH-like protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 28525 | 28791 |
| YP_008408699.1 | NC_022052_p41 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 34922 | 35317 |
| YP_008408750.1 | NC_022052_p92 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 60069 | 60338 |
| YP_008408728.1 | NC_022052_p70 | hypothetical protein | phrog_18534 | unknown function | unknown function | 1 | 49702 | 49860 |
| YP_008408724.1 | NC_022052_p66 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 47050 | 47730 |
| YP_008408747.1 | NC_022052_p89 | hypothetical protein | phrog_2218 | unknown function | unknown function | 1 | 58964 | 59194 |
| YP_008408674.1 | NC_022052_p16 | tail assembly chaperone | phrog_4464 | tail assembly chaperone | tail | 1 | 10118 | 10393 |
| YP_008408739.1 | NC_022052_p81 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 54856 | 55422 |
| YP_008408751.1 | NC_022052_p93 | hypothetical protein | phrog_4472 | nucleotide kinase | other | 1 | 60316 | 60657 |
| YP_008408773.1 | NC_022052_p115 | hypothetical protein | phrog_6004 | unknown function | unknown function | -1 | 69220 | 69504 |
| YP_008408775.1 | NC_022052_p117 | hypothetical protein | phrog_8547 | unknown function | unknown function | -1 | 69723 | 69872 |
| YP_008408760.1 | NC_022052_p102 | hypothetical protein | phrog_10290 | unknown function | unknown function | 1 | 63135 | 63347 |
| YP_008408713.1 | NC_022052_p55 | hypothetical protein | phrog_5872 | unknown function | unknown function | 1 | 42791 | 43108 |
| YP_008408776.1 | NC_022052_p118 | hypothetical protein | phrog_6968 | unknown function | unknown function | -1 | 69874 | 70059 |
| YP_008408709.1 | NC_022052_p51 | hypothetical protein | phrog_1498 | unknown function | unknown function | 1 | 40234 | 40392 |
| YP_008408755.1 | NC_022052_p97 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 61872 | 62291 |
| YP_008408663.1 | NC_022052_p5 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 1185 | 2750 |
| YP_008408670.1 | NC_022052_p12 | hypothetical protein | phrog_5775 | head-tail connector protein | connector | 1 | 8176 | 8592 |
| YP_008408716.1 | NC_022052_p58 | hypothetical protein | phrog_7425 | unknown function | unknown function | 1 | 43401 | 43592 |