Genomic map of Mycobacterium phage Bobi (NC_022055)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022055
Definition
Mycobacterium phage Bobi, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
DB of origin
REFSEQ
Length
59179
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
107
%GC
61.66
Number of singletons
2
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008409034.1 NC_022055_p77 hypothetical protein phrog_7170 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 47590 48216
YP_008408963.1 NC_022055_p6 scaffolding protein phrog_4638 head scaffolding protein head and packaging 1 4408 4944
YP_008409013.1 NC_022055_p56 hypothetical protein phrog_1797 unknown function unknown function 1 38447 39109
YP_008408961.1 NC_022055_p4 portal protein phrog_104 portal protein head and packaging 1 2199 3620
YP_008409043.1 NC_022055_p86 hypothetical protein phrog_722 unknown function unknown function 1 50927 51202
YP_008409019.1 NC_022055_p62 hypothetical protein phrog_658 unknown function unknown function 1 40720 41055
YP_008409014.1 NC_022055_p57 hypothetical protein phrog_3416 unknown function unknown function 1 39144 39935
YP_008409011.1 NC_022055_p54 hypothetical protein phrog_1816 unknown function unknown function 1 38032 38223
YP_008409048.1 NC_022055_p91 hypothetical protein phrog_1091 unknown function unknown function 1 52068 52268
YP_008409064.1 NC_022055_p107 glycosyltransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 58473 59087
YP_008409046.1 NC_022055_p89 hypothetical protein phrog_4152 unknown function unknown function 1 51776 51904
YP_008408976.1 NC_022055_p19 minor tail protein phrog_732 minor tail protein tail 1 17142 17990
YP_008409039.1 NC_022055_p82 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 49186 50037
YP_008408994.1 NC_022055_p37 DnaQ phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 30079 30900
YP_008408995.1 NC_022055_p38 hypothetical protein phrog_1791 unknown function unknown function 1 30987 31202
YP_008408960.1 NC_022055_p3 terminase phrog_2 terminase large subunit head and packaging 1 671 2158
YP_008408987.1 NC_022055_p30 hypothetical protein phrog_1172 unknown function unknown function 1 26629 26766
YP_008409029.1 NC_022055_p72 hypothetical protein phrog_780 unknown function unknown function 1 44458 44685
YP_008409003.1 NC_022055_p46 integrase phrog_1 integrase integration and excision 1 33890 35017
YP_008408962.1 NC_022055_p5 capsid maturation protease phrog_193 head maturation protease head and packaging 1 3604 4329
YP_008409058.1 NC_022055_p101 hypothetical protein phrog_1385 unknown function unknown function 1 55542 55784
YP_008409038.1 NC_022055_p81 hypothetical protein phrog_2451 unknown function unknown function 1 49048 49182
YP_008409026.1 NC_022055_p69 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43528 43884
YP_008408981.1 NC_022055_p24 hypothetical protein phrog_2005 minor tail protein tail 1 23952 24206
YP_008408997.1 NC_022055_p40 hypothetical protein phrog_357 transcriptional repressor transcription regulation -1 31335 31847
YP_008408958.1 NC_022055_p1 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41 373
YP_008409010.1 NC_022055_p53 HNH endonuclease phrog_1492 HNH endonuclease DNA, RNA and nucleotide metabolism 1 37484 38035
YP_008408990.1 NC_022055_p33 lysB phrog_102 endolysin lysis 1 28223 29221
YP_008409042.1 NC_022055_p85 hypothetical protein phrog_1546 unknown function unknown function 1 50553 50930
YP_008409052.1 NC_022055_p95 hypothetical protein phrog_2247 unknown function unknown function 1 53013 53294
YP_008409024.1 NC_022055_p67 hypothetical protein phrog_2632 unknown function unknown function 1 42685 42939
YP_008408968.1 NC_022055_p11 hypothetical protein phrog_813 head-tail adaptor connector 1 6948 7352
YP_008409057.1 NC_022055_p100 hypothetical protein phrog_1186 unknown function unknown function 1 55132 55545
YP_008409012.1 NC_022055_p55 hypothetical protein phrog_780 unknown function unknown function 1 38256 38450
YP_008409009.1 NC_022055_p52 hypothetical protein phrog_1840 excisionase integration and excision 1 37227 37487
YP_008408993.1 NC_022055_p36 hypothetical protein phrog_2004 unknown function unknown function 1 29859 30092
YP_008409002.1 NC_022055_p45 HNH endonuclease phrog_3593 HNH endonuclease DNA, RNA and nucleotide metabolism 1 33117 33890
YP_008409061.1 NC_022055_p104 hypothetical protein phrog_3297 kinase other 1 57646 57942
YP_008408965.1 NC_022055_p8 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 5928 6299
YP_008409047.1 NC_022055_p90 hypothetical protein phrog_1901 unknown function unknown function 1 51901 52092
YP_008408964.1 NC_022055_p7 major capsid protein phrog_10 major head protein head and packaging 1 5007 5915
YP_008408974.1 NC_022055_p17 minor tail protein phrog_106 minor tail protein tail 1 13599 15308
YP_008409033.1 NC_022055_p76 hypothetical protein phrog_2060 DNA methyltransferase other 1 47153 47593
YP_008408959.1 NC_022055_p2 hypothetical protein phrog_4479 terminase small subunit head and packaging 1 445 699
YP_008408973.1 NC_022055_p16 tapemeasure protein phrog_1942 tail length tape measure protein tail 1 9900 13598
YP_008409063.1 NC_022055_p106 hypothetical protein phrog_8053 unknown function unknown function 1 58267 58476
YP_008409056.1 NC_022055_p99 hypothetical protein singleton unknown function unknown function 1 54932 55135
YP_008408985.1 NC_022055_p28 hypothetical protein phrog_411 unknown function unknown function 1 26180 26464
YP_008409008.1 NC_022055_p51 hypothetical protein phrog_5563 unknown function unknown function 1 37108 37230
YP_008409054.1 NC_022055_p97 hypothetical protein phrog_8604 unknown function unknown function 1 53974 54576
YP_008408998.1 NC_022055_p41 hypothetical protein phrog_33090 unknown function unknown function -1 31844 32038
YP_008409028.1 NC_022055_p71 hypothetical protein phrog_3821 unknown function unknown function 1 44117 44386
YP_008408988.1 NC_022055_p31 hypothetical protein phrog_747 unknown function unknown function 1 26797 27072
YP_008409021.1 NC_022055_p64 hypothetical protein phrog_2096 unknown function unknown function 1 41453 41953
YP_008409062.1 NC_022055_p105 hypothetical protein phrog_17935 unknown function unknown function 1 58080 58241
YP_008409023.1 NC_022055_p66 hypothetical protein phrog_1834 unknown function unknown function 1 42467 42697
YP_008409031.1 NC_022055_p74 hypothetical protein phrog_7789 unknown function unknown function 1 46836 46925
YP_008409000.1 NC_022055_p43 hypothetical protein phrog_5970 unknown function unknown function -1 32318 32563
YP_008409001.1 NC_022055_p44 hypothetical protein phrog_5130 unknown function unknown function -1 32560 32748
YP_008409049.1 NC_022055_p92 hypothetical protein phrog_1545 unknown function unknown function 1 52268 52405
YP_008408977.1 NC_022055_p20 minor tail protein phrog_346 minor tail protein tail 1 17987 20524
YP_008408970.1 NC_022055_p13 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8406 9342
YP_008409005.1 NC_022055_p48 immunity repressor phrog_2838 transcriptional repressor transcription regulation -1 35798 36367
YP_008408984.1 NC_022055_p27 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25838 26029
YP_008408999.1 NC_022055_p42 hypothetical protein phrog_14103 unknown function unknown function -1 32035 32232
YP_008409045.1 NC_022055_p88 hypothetical protein phrog_647 unknown function unknown function 1 51408 51779
YP_008409053.1 NC_022055_p96 hypothetical protein phrog_908 unknown function unknown function 1 53291 53977
YP_008408989.1 NC_022055_p32 lysA phrog_700 endolysin lysis 1 27069 28223
YP_008409022.1 NC_022055_p65 HTH DNA binding domain protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 41950 42315
YP_008408983.1 NC_022055_p26 hypothetical protein phrog_754 minor tail protein tail 1 24854 25834
YP_008409036.1 NC_022055_p79 hypothetical protein phrog_464 unknown function unknown function 1 48352 48687
YP_008408975.1 NC_022055_p18 minor tail protein phrog_110 minor tail protein tail 1 15396 17105
YP_008408992.1 NC_022055_p35 hypothetical protein phrog_404 minor tail protein tail 1 29460 29834
YP_008409050.1 NC_022055_p93 hypothetical protein phrog_5186 unknown function unknown function 1 52402 52575
YP_008408996.1 NC_022055_p39 hypothetical protein phrog_1839 unknown function unknown function 1 31195 31287
YP_008408980.1 NC_022055_p23 hypothetical protein phrog_240 head protein head and packaging 1 23588 23929
YP_008409025.1 NC_022055_p68 hypothetical protein phrog_3290 single strand annealing protein DNA, RNA and nucleotide metabolism 1 42953 43531
YP_008409037.1 NC_022055_p80 hypothetical protein phrog_11096 unknown function unknown function 1 48680 49051
YP_008408978.1 NC_022055_p21 D-ala-D-ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 20521 22407
YP_008409020.1 NC_022055_p63 WhiB phrog_1333 unknown function unknown function 1 41055 41456
YP_008409004.1 NC_022055_p47 hypothetical protein phrog_1948 unknown function unknown function -1 35080 35532
YP_008409051.1 NC_022055_p94 hypothetical protein phrog_2278 unknown function unknown function 1 52628 53020
YP_008409059.1 NC_022055_p102 glycosyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 55781 57391
YP_008409017.1 NC_022055_p60 hypothetical protein phrog_1849 unknown function unknown function 1 40250 40531
YP_008409018.1 NC_022055_p61 hypothetical protein phrog_7605 unknown function unknown function 1 40528 40716
YP_008409016.1 NC_022055_p59 hypothetical protein singleton unknown function unknown function 1 40123 40212
YP_008409032.1 NC_022055_p75 DNA methylase phrog_3008 DNA methyltransferase other 1 46900 47151
YP_008409007.1 NC_022055_p50 hypothetical protein phrog_2025 unknown function unknown function 1 36824 37111
YP_008409006.1 NC_022055_p49 CRO protein phrog_3 transcriptional repressor transcription regulation 1 36534 36767
YP_008408979.1 NC_022055_p22 hypothetical protein phrog_2106 minor tail protein tail 1 22410 23570
YP_008408991.1 NC_022055_p34 holin phrog_443 holin lysis 1 29230 29463
YP_008409035.1 NC_022055_p78 hypothetical protein phrog_5921 unknown function unknown function 1 48209 48355
YP_008409015.1 NC_022055_p58 hypothetical protein phrog_11849 membrane protein moron, auxiliary metabolic gene and host takeover 1 39932 40084
YP_008409030.1 NC_022055_p73 DNA methylase phrog_67 DNA methyltransferase other 1 44682 46739
YP_008409044.1 NC_022055_p87 hypothetical protein phrog_3447 unknown function unknown function 1 51199 51411
YP_008409041.1 NC_022055_p84 hypothetical protein phrog_1943 unknown function unknown function 1 50362 50556
YP_008409027.1 NC_022055_p70 hypothetical protein phrog_1311 unknown function unknown function 1 43891 44043
YP_008409055.1 NC_022055_p98 hypothetical protein phrog_1869 unknown function unknown function 1 54767 54931
YP_008408982.1 NC_022055_p25 hypothetical protein phrog_2012 minor tail protein tail 1 24219 24857
YP_008408967.1 NC_022055_p10 hypothetical protein phrog_1929 head-tail connector protein connector 1 6632 6958
YP_008409040.1 NC_022055_p83 hypothetical protein phrog_7196 unknown function unknown function 1 50174 50365
YP_008409060.1 NC_022055_p103 hypothetical protein phrog_1693 unknown function unknown function 1 57376 57606
YP_008408972.1 NC_022055_p15 HNH endonuclease phrog_3593 HNH endonuclease DNA, RNA and nucleotide metabolism 1 9361 9900
YP_008408971.1 NC_022055_p14 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8406 8957
YP_008408966.1 NC_022055_p9 hypothetical protein phrog_763 head-tail adaptor connector 1 6296 6625
YP_008408969.1 NC_022055_p12 major tail subunit phrog_476 major tail protein tail 1 7460 8269
YP_008408986.1 NC_022055_p29 hypothetical protein phrog_932 unknown function unknown function 1 26471 26632