Genomic map of Mycobacterium phage Hamulus (NC_022056)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022056
Definition
Mycobacterium phage Hamulus, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
DB of origin
REFSEQ
Length
57155
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
105
%GC
61.75
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008409149.1 NC_022056_p85 hypothetical protein phrog_38387 unknown function unknown function 1 49992 50075
YP_008409065.1 NC_022056_p1 terminase small subunit phrog_226 minor tail protein tail 1 110 565
YP_008409067.1 NC_022056_p3 portal protein phrog_104 portal protein head and packaging 1 2256 3626
YP_008409078.1 NC_022056_p14 tape measure protein phrog_1942 tail length tape measure protein tail 1 9538 13017
YP_008409145.1 NC_022056_p81 hypothetical protein phrog_722 unknown function unknown function 1 48864 49142
YP_008409112.1 NC_022056_p48 hypothetical protein phrog_130 anti-repressor Ant transcription regulation 1 36115 37119
YP_008409167.1 NC_022056_p103 hypothetical protein phrog_1693 unknown function unknown function 1 55855 56067
YP_008409169.1 NC_022056_p105 HNH domain protein phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 56687 57013
YP_008409090.1 NC_022056_p26 hypothetical protein phrog_411 unknown function unknown function 1 25595 25891
YP_008409153.1 NC_022056_p89 ATP binding domain protein phrog_1545 unknown function unknown function 1 50612 50749
YP_008409156.1 NC_022056_p92 hypothetical protein phrog_2278 unknown function unknown function 1 51197 51526
YP_008409144.1 NC_022056_p80 hypothetical protein phrog_647 unknown function unknown function 1 48587 48871
YP_008409163.1 NC_022056_p99 hypothetical protein phrog_1385 unknown function unknown function 1 53533 53775
YP_008409082.1 NC_022056_p18 minor tail subunit phrog_346 minor tail protein tail 1 17403 19940
YP_008409155.1 NC_022056_p91 hypothetical protein phrog_4126 unknown function unknown function 1 51081 51200
YP_008409094.1 NC_022056_p30 LysA phrog_700 endolysin lysis 1 26480 27646
YP_008409087.1 NC_022056_p23 hypothetical protein phrog_2012 minor tail protein tail 1 23638 24276
YP_008409076.1 NC_022056_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8583 9519
YP_008409134.1 NC_022056_p70 hypothetical protein phrog_8485 unknown function unknown function -1 44772 45149
YP_008409113.1 NC_022056_p49 hypothetical protein phrog_2025 unknown function unknown function 1 37116 37331
YP_008409081.1 NC_022056_p17 hypothetical protein phrog_732 minor tail protein tail 1 16576 17406
YP_008409116.1 NC_022056_p52 hypothetical protein phrog_1816 unknown function unknown function 1 37611 37799
YP_008409099.1 NC_022056_p35 hypothetical protein phrog_2004 unknown function unknown function 1 30127 30387
YP_008409137.1 NC_022056_p73 modification methylase RSRI phrog_67 DNA methyltransferase other 1 46052 46708
YP_008409091.1 NC_022056_p27 hypothetical protein phrog_932 unknown function unknown function 1 25898 26044
YP_008409150.1 NC_022056_p86 hypothetical protein phrog_4152 unknown function unknown function 1 50072 50248
YP_008409160.1 NC_022056_p96 hypothetical protein phrog_1869 unknown function unknown function 1 52749 52916
YP_008409132.1 NC_022056_p68 cytosine methyl transferase phrog_116 DNA methyltransferase other 1 43189 44649
YP_008409093.1 NC_022056_p29 hypothetical protein phrog_747 unknown function unknown function 1 26232 26483
YP_008409096.1 NC_022056_p32 LysB phrog_102 endolysin lysis 1 28436 29479
YP_008409069.1 NC_022056_p5 scaffold protein phrog_2592 head scaffolding protein head and packaging 1 4451 5044
YP_008409107.1 NC_022056_p43 integrase XerD phrog_1 integrase integration and excision 1 32980 34269
YP_008409133.1 NC_022056_p69 DNA binding domain protein phrog_6506 Arc-like repressor transcription regulation -1 44618 44779
YP_008409142.1 NC_022056_p78 hypothetical protein phrog_1943 unknown function unknown function 1 48238 48432
YP_008409077.1 NC_022056_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8583 9134
YP_008409135.1 NC_022056_p71 hypothetical protein phrog_8611 unknown function unknown function -1 45156 45488
YP_008409125.1 NC_022056_p61 TC3 transposase phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 40756 41121
YP_008409147.1 NC_022056_p83 hypothetical protein phrog_3381 unknown function unknown function 1 49332 49535
YP_008409114.1 NC_022056_p50 hypothetical protein phrog_5563 unknown function unknown function 1 37328 37420
YP_008409101.1 NC_022056_p37 hypothetical protein phrog_1791 unknown function unknown function 1 31270 31503
YP_008409136.1 NC_022056_p72 hypothetical protein phrog_2060 DNA methyltransferase other 1 45640 45987
YP_008409161.1 NC_022056_p97 hypothetical protein phrog_1694 unknown function unknown function 1 52929 53126
YP_008409128.1 NC_022056_p64 DNA repair domain phrog_3290 single strand annealing protein DNA, RNA and nucleotide metabolism 1 41759 42337
YP_008409118.1 NC_022056_p54 hypothetical protein phrog_1797 unknown function unknown function 1 38023 38607
YP_008409117.1 NC_022056_p53 hypothetical protein phrog_780 unknown function unknown function 1 37796 38026
YP_008409131.1 NC_022056_p67 hypothetical protein phrog_3821 unknown function unknown function 1 42842 43192
YP_008409089.1 NC_022056_p25 HTH DNA-binding domain protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25245 25445
YP_008409105.1 NC_022056_p41 hypothetical protein phrog_5254 unknown function unknown function -1 32190 32432
YP_008409088.1 NC_022056_p24 hypothetical protein phrog_754 minor tail protein tail 1 24276 25241
YP_008409115.1 NC_022056_p51 TOR inhibition protein phrog_66 excisionase and transcriptional regulator integration and excision 1 37417 37614
YP_008409108.1 NC_022056_p44 hypothetical protein phrog_1948 unknown function unknown function -1 34346 34801
YP_008409140.1 NC_022056_p76 hypothetical protein singleton unknown function unknown function 1 47691 47852
YP_008409129.1 NC_022056_p65 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 42334 42690
YP_008409106.1 NC_022056_p42 hypothetical protein phrog_22055 unknown function unknown function -1 32429 32605
YP_008409165.1 NC_022056_p101 polypeptide N-acetylglucos-aminyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 53946 55382
YP_008409120.1 NC_022056_p56 hypothetical protein phrog_1849 unknown function unknown function 1 39053 39334
YP_008409124.1 NC_022056_p60 HTH domain protein phrog_2096 unknown function unknown function 1 40256 40759
YP_008409100.1 NC_022056_p36 DnaQ-like protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 30374 31195
YP_008409122.1 NC_022056_p58 hypothetical protein phrog_658 unknown function unknown function 1 39523 39858
YP_008409071.1 NC_022056_p7 hypothetical protein phrog_2377 head-tail adaptor Ad1 connector 1 5884 6450
YP_008409119.1 NC_022056_p55 hypothetical protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 38658 39029
YP_008409104.1 NC_022056_p40 HTH domain protein phrog_5497 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 31992 32189
YP_008409075.1 NC_022056_p11 major tail subunit phrog_476 major tail protein tail 1 7635 8444
YP_008409083.1 NC_022056_p19 D-ala-D-ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 19937 21823
YP_008409070.1 NC_022056_p6 Capsid phrog_267 major head protein head and packaging 1 5063 5884
YP_008409092.1 NC_022056_p28 hypothetical protein phrog_1172 unknown function unknown function 1 26041 26181
YP_008409168.1 NC_022056_p104 N-acetylglucos-aminyltransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 56064 56687
YP_008409138.1 NC_022056_p74 hypothetical protein phrog_2451 unknown function unknown function 1 46705 46839
YP_008409098.1 NC_022056_p34 hypothetical protein phrog_404 minor tail protein tail 1 29756 30130
YP_008409162.1 NC_022056_p98 trigger factor phrog_1186 unknown function unknown function 1 53123 53536
YP_008409143.1 NC_022056_p79 hypothetical protein phrog_5892 unknown function unknown function 1 48429 48590
YP_008409139.1 NC_022056_p75 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 46843 47694
YP_008409157.1 NC_022056_p93 hypothetical protein phrog_2247 unknown function unknown function 1 51523 51786
YP_008409085.1 NC_022056_p21 hypothetical protein phrog_240 head protein head and packaging 1 23004 23345
YP_008409166.1 NC_022056_p102 Ser/Thr kinase phrog_3297 kinase other 1 55385 55858
YP_008409072.1 NC_022056_p8 hypothetical protein phrog_763 head-tail adaptor connector 1 6447 6779
YP_008409126.1 NC_022056_p62 hypothetical protein phrog_1834 unknown function unknown function 1 41273 41503
YP_008409127.1 NC_022056_p63 hypothetical protein phrog_2632 unknown function unknown function 1 41500 41745
YP_008409164.1 NC_022056_p100 hypothetical protein phrog_2057 unknown function unknown function 1 53768 53929
YP_008409111.1 NC_022056_p47 hypothetical protein phrog_6267 transcriptional repressor transcription regulation 1 35751 36056
YP_008409066.1 NC_022056_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 588 2225
YP_008409068.1 NC_022056_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3613 4368
YP_008409152.1 NC_022056_p88 hypothetical protein phrog_1091 unknown function unknown function 1 50433 50612
YP_008409103.1 NC_022056_p39 hypothetical protein phrog_2437 unknown function unknown function -1 31837 31995
YP_008409095.1 NC_022056_p31 HNH homing endonuclease domain protein phrog_1492 HNH endonuclease DNA, RNA and nucleotide metabolism 1 27654 28418
YP_008409086.1 NC_022056_p22 hypothetical protein phrog_2005 minor tail protein tail 1 23368 23622
YP_008409084.1 NC_022056_p20 hypothetical protein phrog_2106 minor tail protein tail 1 21820 22986
YP_008409123.1 NC_022056_p59 WhiB phrog_1333 unknown function unknown function 1 39858 40259
YP_008409158.1 NC_022056_p94 hypothetical protein phrog_1467 unknown function unknown function 1 51783 52418
YP_008409148.1 NC_022056_p84 hypothetical protein phrog_11026 unknown function unknown function 1 49537 49995
YP_008409159.1 NC_022056_p95 DNA binding domain protein phrog_2474 MerR-like transcriptional regulator transcription regulation 1 52528 52752
YP_008409102.1 NC_022056_p38 hypothetical protein phrog_1839 unknown function unknown function 1 31496 31588
YP_008409141.1 NC_022056_p77 hypothetical protein phrog_11384 unknown function unknown function 1 47954 48241
YP_008409154.1 NC_022056_p90 hypothetical protein phrog_7643 unknown function unknown function 1 50746 51084
YP_008409110.1 NC_022056_p46 HTH domain protein phrog_3949 transcriptional repressor transcription regulation -1 35064 35597
YP_008409073.1 NC_022056_p9 hypothetical protein phrog_1929 head-tail connector protein connector 1 6782 7111
YP_008409074.1 NC_022056_p10 hypothetical protein phrog_813 head-tail adaptor connector 1 7098 7505
YP_008409151.1 NC_022056_p87 hypothetical protein phrog_1901 unknown function unknown function 1 50245 50436
YP_008409080.1 NC_022056_p16 minor tail subunit phrog_110 minor tail protein tail 1 14812 16521
YP_008409121.1 NC_022056_p57 hypothetical protein phrog_7605 unknown function unknown function 1 39331 39519
YP_008409079.1 NC_022056_p15 minor tail subunit phrog_106 minor tail protein tail 1 13018 14727
YP_008409109.1 NC_022056_p45 hypothetical protein phrog_7613 unknown function unknown function -1 34915 35061
YP_008409130.1 NC_022056_p66 hypothetical protein phrog_1311 unknown function unknown function 1 42697 42849
YP_008409146.1 NC_022056_p82 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision 1 49139 49306
YP_008409097.1 NC_022056_p33 holin phrog_443 holin lysis 1 29517 29759