| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_022059 |
Definition |
Mycobacterium phage DrDrey, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus. |
DB of origin |
REFSEQ |
Length |
77367 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
144 |
%GC |
62.99 |
Number of singletons |
0 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008409429.1 | NC_022059_p36 | LysB | phrog_102 | endolysin | lysis | 1 | 32350 | 33207 |
| YP_008409513.1 | NC_022059_p120 | hypothetical protein | phrog_2279 | unknown function | unknown function | 1 | 68819 | 69031 |
| YP_008409531.1 | NC_022059_p138 | hypothetical protein | phrog_2883 | unknown function | unknown function | -1 | 74473 | 75021 |
| YP_008409512.1 | NC_022059_p119 | hypothetical protein | phrog_2755 | unknown function | unknown function | 1 | 68653 | 68826 |
| YP_008409497.1 | NC_022059_p104 | hypothetical protein | phrog_2757 | unknown function | unknown function | 1 | 62819 | 63109 |
| YP_008409472.1 | NC_022059_p79 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 49951 | 50601 |
| YP_008409442.1 | NC_022059_p49 | hypothetical protein | phrog_2815 | unknown function | unknown function | -1 | 37132 | 37278 |
| YP_008409509.1 | NC_022059_p116 | hypothetical protein | phrog_1941 | unknown function | unknown function | 1 | 67225 | 67467 |
| YP_008409414.1 | NC_022059_p21 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 12959 | 13420 |
| YP_008409413.1 | NC_022059_p20 | hypothetical protein | phrog_5711 | head fiber protein | head and packaging | 1 | 12365 | 12838 |
| YP_008409440.1 | NC_022059_p47 | hypothetical protein | phrog_2893 | unknown function | unknown function | -1 | 36669 | 36905 |
| YP_008409418.1 | NC_022059_p25 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 20238 | 21917 |
| YP_008409453.1 | NC_022059_p60 | hypothetical protein | phrog_4633 | unknown function | unknown function | 1 | 43081 | 43269 |
| YP_008409403.1 | NC_022059_p10 | hypothetical protein | phrog_2845 | unknown function | unknown function | 1 | 4978 | 5199 |
| YP_008409436.1 | NC_022059_p43 | hypothetical protein | phrog_647 | unknown function | unknown function | -1 | 35509 | 35973 |
| YP_008409524.1 | NC_022059_p131 | hypothetical protein | phrog_2942 | unknown function | unknown function | -1 | 71757 | 72011 |
| YP_008409525.1 | NC_022059_p132 | hypothetical protein | phrog_8201 | unknown function | unknown function | -1 | 72008 | 72082 |
| YP_008409434.1 | NC_022059_p41 | Lsr2 | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 34881 | 35267 |
| YP_008409483.1 | NC_022059_p90 | hypothetical protein | phrog_2844 | unknown function | unknown function | 1 | 55275 | 55397 |
| YP_008409433.1 | NC_022059_p40 | hypothetical protein | phrog_9947 | Lsr2-like DNA bridging protein | DNA, RNA and nucleotide metabolism | -1 | 34699 | 34878 |
| YP_008409399.1 | NC_022059_p6 | terminase small subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 1057 | 1518 |
| YP_008409446.1 | NC_022059_p53 | hypothetical protein | phrog_2842 | unknown function | unknown function | 1 | 39533 | 39772 |
| YP_008409457.1 | NC_022059_p64 | hypothetical protein | phrog_2221 | unknown function | unknown function | 1 | 43987 | 44148 |
| YP_008409526.1 | NC_022059_p133 | hypothetical protein | phrog_1915 | unknown function | unknown function | -1 | 72444 | 72902 |
| YP_008409404.1 | NC_022059_p11 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 5186 | 6742 |
| YP_008409419.1 | NC_022059_p26 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 21926 | 22759 |
| YP_008409536.1 | NC_022059_p143 | hypothetical protein | phrog_2904 | unknown function | unknown function | 1 | 76153 | 76500 |
| YP_008409529.1 | NC_022059_p136 | hypothetical protein | phrog_8217 | unknown function | unknown function | -1 | 73790 | 74101 |
| YP_008409527.1 | NC_022059_p134 | hypothetical protein | phrog_1587 | unknown function | unknown function | -1 | 72917 | 73246 |
| YP_008409441.1 | NC_022059_p48 | hypothetical protein | phrog_2702 | unknown function | unknown function | -1 | 36898 | 37113 |
| YP_008409485.1 | NC_022059_p92 | hypothetical protein | phrog_1590 | unknown function | unknown function | 1 | 56756 | 57577 |
| YP_008409533.1 | NC_022059_p140 | hypothetical protein | phrog_1438 | unknown function | unknown function | -1 | 75422 | 75595 |
| YP_008409521.1 | NC_022059_p128 | hypothetical protein | phrog_3016 | unknown function | unknown function | 1 | 70476 | 70610 |
| YP_008409454.1 | NC_022059_p61 | hypothetical protein | phrog_2744 | unknown function | unknown function | 1 | 43316 | 43621 |
| YP_008409486.1 | NC_022059_p93 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 57574 | 57834 |
| YP_008409503.1 | NC_022059_p110 | hypothetical protein | phrog_4826 | unknown function | unknown function | 1 | 65091 | 65408 |
| YP_008409498.1 | NC_022059_p105 | hypothetical protein | phrog_1969 | unknown function | unknown function | 1 | 63114 | 63425 |
| YP_008409466.1 | NC_022059_p73 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 48218 | 48595 |
| YP_008409473.1 | NC_022059_p80 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 50583 | 50930 |
| YP_008409459.1 | NC_022059_p66 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 44666 | 44992 |
| YP_008409469.1 | NC_022059_p76 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 49001 | 49414 |
| YP_008409484.1 | NC_022059_p91 | RNA ligase | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 55394 | 56719 |
| YP_008409439.1 | NC_022059_p46 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 36505 | 36672 |
| YP_008409522.1 | NC_022059_p129 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 70989 | 71252 |
| YP_008409398.1 | NC_022059_p5 | hypothetical protein | phrog_3858 | unknown function | unknown function | 1 | 783 | 1064 |
| YP_008409489.1 | NC_022059_p96 | hypothetical protein | phrog_7833 | unknown function | unknown function | 1 | 58462 | 58584 |
| YP_008409520.1 | NC_022059_p127 | hypothetical protein | phrog_2897 | unknown function | unknown function | 1 | 70334 | 70465 |
| YP_008409519.1 | NC_022059_p126 | hypothetical protein | phrog_2925 | unknown function | unknown function | 1 | 70155 | 70334 |
| YP_008409537.1 | NC_022059_p144 | hypothetical protein | phrog_2762 | unknown function | unknown function | 1 | 76575 | 76796 |
| YP_008409499.1 | NC_022059_p106 | HNH protein | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 63478 | 63768 |
| YP_008409480.1 | NC_022059_p87 | hypothetical protein | phrog_2894 | unknown function | unknown function | 1 | 53537 | 53731 |
| YP_008409471.1 | NC_022059_p78 | hypothetical protein | phrog_1673 | unknown function | unknown function | 1 | 49718 | 49954 |
| YP_008409516.1 | NC_022059_p123 | hypothetical protein | phrog_2764 | unknown function | unknown function | 1 | 69673 | 69840 |
| YP_008409493.1 | NC_022059_p100 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 60931 | 61371 |
| YP_008409478.1 | NC_022059_p85 | hypothetical protein | phrog_3836 | unknown function | unknown function | 1 | 52816 | 53181 |
| YP_008409535.1 | NC_022059_p142 | hypothetical protein | phrog_2795 | unknown function | unknown function | -1 | 75834 | 76088 |
| YP_008409443.1 | NC_022059_p50 | hypothetical protein | phrog_2759 | unknown function | unknown function | -1 | 37278 | 37673 |
| YP_008409487.1 | NC_022059_p94 | hypothetical protein | phrog_2853 | unknown function | unknown function | 1 | 57851 | 58009 |
| YP_008409408.1 | NC_022059_p15 | hypothetical protein | phrog_442 | head-tail adaptor | connector | 1 | 9629 | 10195 |
| YP_008409462.1 | NC_022059_p69 | ERF protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 46357 | 47079 |
| YP_008409416.1 | NC_022059_p23 | tape measure protein | phrog_2723 | tail length tape measure protein | tail | 1 | 13823 | 18559 |
| YP_008409505.1 | NC_022059_p112 | DnaQ-like exonuclease | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 66002 | 66787 |
| YP_008409458.1 | NC_022059_p65 | hypothetical protein | phrog_16636 | secreted protein | other | 1 | 44193 | 44669 |
| YP_008409504.1 | NC_022059_p111 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 65398 | 65991 |
| YP_008409481.1 | NC_022059_p88 | Pnk | phrog_505 | polynucleotide kinase | other | 1 | 53886 | 54827 |
| YP_008409506.1 | NC_022059_p113 | hypothetical protein | phrog_3647 | unknown function | unknown function | 1 | 66784 | 66936 |
| YP_008409456.1 | NC_022059_p63 | hypothetical protein | phrog_2147 | unknown function | unknown function | 1 | 43755 | 44054 |
| YP_008409432.1 | NC_022059_p39 | hypothetical protein | phrog_1492 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 34034 | 34621 |
| YP_008409492.1 | NC_022059_p99 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 59457 | 60938 |
| YP_008409415.1 | NC_022059_p22 | tail assembly chaperone | phrog_5940 | tail assembly chaperone | tail | 1 | 13552 | 13830 |
| YP_008409420.1 | NC_022059_p27 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 22776 | 25172 |
| YP_008409488.1 | NC_022059_p95 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 58006 | 58458 |
| YP_008409451.1 | NC_022059_p58 | hypothetical protein | phrog_2463 | unknown function | unknown function | 1 | 42351 | 42497 |
| YP_008409425.1 | NC_022059_p32 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 29775 | 30059 |
| YP_008409510.1 | NC_022059_p117 | RecA | phrog_97 | UvsX-like recombinase | other | 1 | 67475 | 68437 |
| YP_008409402.1 | NC_022059_p9 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 2303 | 4966 |
| YP_008409464.1 | NC_022059_p71 | hypothetical protein | phrog_2771 | unknown function | unknown function | 1 | 47383 | 47853 |
| YP_008409400.1 | NC_022059_p7 | hypothetical protein | phrog_2142 | unknown function | unknown function | 1 | 1511 | 1855 |
| YP_008409422.1 | NC_022059_p29 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 28010 | 28972 |
| YP_008409500.1 | NC_022059_p107 | hypothetical protein | phrog_2846 | unknown function | unknown function | 1 | 64222 | 64446 |
| YP_008409426.1 | NC_022059_p33 | LysA | phrog_317 | endolysin | lysis | 1 | 30133 | 31635 |
| YP_008409397.1 | NC_022059_p4 | hypothetical protein | phrog_2775 | unknown function | unknown function | 1 | 601 | 786 |
| YP_008409474.1 | NC_022059_p81 | DnaB-like helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 50923 | 52185 |
| YP_008409447.1 | NC_022059_p54 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 39750 | 40523 |
| YP_008409517.1 | NC_022059_p124 | hypothetical protein | phrog_2823 | unknown function | unknown function | 1 | 69824 | 70024 |
| YP_008409532.1 | NC_022059_p139 | hypothetical protein | phrog_3174 | unknown function | unknown function | -1 | 75025 | 75417 |
| YP_008409511.1 | NC_022059_p118 | hypothetical protein | phrog_14507 | unknown function | unknown function | 1 | 68434 | 68532 |
| YP_008409445.1 | NC_022059_p52 | integrase | phrog_1 | integrase | integration and excision | 1 | 38513 | 39394 |
| YP_008409438.1 | NC_022059_p45 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 36332 | 36505 |
| YP_008409431.1 | NC_022059_p38 | NrdH | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 33627 | 33872 |
| YP_008409448.1 | NC_022059_p55 | immunity repressor | phrog_2745 | transcriptional repressor | transcription regulation | -1 | 40618 | 41049 |
| YP_008409455.1 | NC_022059_p62 | hypothetical protein | phrog_3463 | unknown function | unknown function | 1 | 43640 | 43747 |
| YP_008409502.1 | NC_022059_p109 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 64717 | 65091 |
| YP_008409477.1 | NC_022059_p84 | hypothetical protein | phrog_2747 | unknown function | unknown function | 1 | 52602 | 52823 |
| YP_008409470.1 | NC_022059_p77 | HNH domain protein | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 49411 | 49728 |
| YP_008409450.1 | NC_022059_p57 | hypothetical protein | phrog_923 | unknown function | unknown function | 1 | 41504 | 42349 |
| YP_008409515.1 | NC_022059_p122 | hypothetical protein | phrog_2174 | unknown function | unknown function | 1 | 69263 | 69676 |
| YP_008409507.1 | NC_022059_p114 | hypothetical protein | phrog_8804 | unknown function | unknown function | 1 | 66933 | 67142 |
| YP_008409494.1 | NC_022059_p101 | Clp protease | phrog_94 | head maturation protease | head and packaging | 1 | 61460 | 62266 |
| YP_008409411.1 | NC_022059_p18 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 10900 | 11304 |
| YP_008409412.1 | NC_022059_p19 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 11331 | 12305 |
| YP_008409501.1 | NC_022059_p108 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 64443 | 64706 |
| YP_008409406.1 | NC_022059_p13 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7834 | 9327 |
| YP_008409467.1 | NC_022059_p74 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 48595 | 48774 |
| YP_008409401.1 | NC_022059_p8 | hypothetical protein | phrog_2202 | unknown function | unknown function | -1 | 1956 | 2267 |
| YP_008409407.1 | NC_022059_p14 | hypothetical protein | phrog_2796 | head-tail connector protein | connector | 1 | 9450 | 9629 |
| YP_008409518.1 | NC_022059_p125 | hypothetical protein | phrog_2296 | unknown function | unknown function | 1 | 70021 | 70158 |
| YP_008409437.1 | NC_022059_p44 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 35970 | 36335 |
| YP_008409491.1 | NC_022059_p98 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 58918 | 59460 |
| YP_008409452.1 | NC_022059_p59 | hypothetical protein | phrog_2800 | unknown function | unknown function | 1 | 42494 | 42772 |
| YP_008409427.1 | NC_022059_p34 | holin | phrog_526 | holin | lysis | 1 | 31639 | 32022 |
| YP_008409405.1 | NC_022059_p12 | capsid maturation protease | phrog_2753 | head maturation protease | head and packaging | 1 | 6745 | 7746 |
| YP_008409394.1 | NC_022059_p1 | hypothetical protein | phrog_3456 | unknown function | unknown function | 1 | 34 | 270 |
| YP_008409530.1 | NC_022059_p137 | hypothetical protein | phrog_2287 | unknown function | unknown function | -1 | 74221 | 74457 |
| YP_008409514.1 | NC_022059_p121 | hypothetical protein | phrog_3062 | unknown function | unknown function | 1 | 69012 | 69266 |
| YP_008409409.1 | NC_022059_p16 | hypothetical protein | phrog_1531 | head closure | connector | 1 | 10210 | 10545 |
| YP_008409463.1 | NC_022059_p70 | hypothetical protein | phrog_2750 | unknown function | unknown function | 1 | 47072 | 47383 |
| YP_008409475.1 | NC_022059_p82 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 52182 | 52370 |
| YP_008409508.1 | NC_022059_p115 | hypothetical protein | phrog_6210 | unknown function | unknown function | 1 | 67139 | 67228 |
| YP_008409460.1 | NC_022059_p67 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 44989 | 45957 |
| YP_008409435.1 | NC_022059_p42 | hypothetical protein | phrog_3481 | unknown function | unknown function | -1 | 35315 | 35512 |
| YP_008409396.1 | NC_022059_p3 | hypothetical protein | phrog_2829 | unknown function | unknown function | 1 | 446 | 604 |
| YP_008409449.1 | NC_022059_p56 | hypothetical protein | phrog_2852 | unknown function | unknown function | 1 | 41370 | 41507 |
| YP_008409482.1 | NC_022059_p89 | hypothetical protein | phrog_2495 | unknown function | unknown function | 1 | 54934 | 55302 |
| YP_008409428.1 | NC_022059_p35 | hypothetical protein | phrog_2424 | unknown function | unknown function | 1 | 32015 | 32353 |
| YP_008409461.1 | NC_022059_p68 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 45954 | 46364 |
| YP_008409534.1 | NC_022059_p141 | hypothetical protein | phrog_2772 | unknown function | unknown function | -1 | 75592 | 75828 |
| YP_008409523.1 | NC_022059_p130 | ParBc domain-containing protein | phrog_2579 | ParB C-terminal domain | DNA, RNA and nucleotide metabolism | -1 | 71249 | 71638 |
| YP_008409410.1 | NC_022059_p17 | hypothetical protein | phrog_2805 | minor tail protein | tail | 1 | 10542 | 10922 |
| YP_008409423.1 | NC_022059_p30 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 29042 | 29470 |
| YP_008409528.1 | NC_022059_p135 | hypothetical protein | phrog_4006 | unknown function | unknown function | -1 | 73251 | 73769 |
| YP_008409468.1 | NC_022059_p75 | hypothetical protein | phrog_2793 | unknown function | unknown function | 1 | 48771 | 49004 |
| YP_008409421.1 | NC_022059_p28 | D-ala-D-ala carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 25169 | 28009 |
| YP_008409395.1 | NC_022059_p2 | hypothetical protein | phrog_4110 | unknown function | unknown function | 1 | 267 | 449 |
| YP_008409417.1 | NC_022059_p24 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18589 | 20250 |
| YP_008409430.1 | NC_022059_p37 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 33204 | 33620 |
| YP_008409490.1 | NC_022059_p97 | hypothetical protein | phrog_2788 | unknown function | unknown function | 1 | 58586 | 58921 |
| YP_008409495.1 | NC_022059_p102 | hypothetical protein | phrog_1454 | unknown function | unknown function | 1 | 62268 | 62465 |
| YP_008409424.1 | NC_022059_p31 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 29457 | 29642 |
| YP_008409465.1 | NC_022059_p72 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 47850 | 48221 |
| YP_008409444.1 | NC_022059_p51 | hypothetical protein | phrog_2847 | unknown function | unknown function | -1 | 37960 | 38262 |
| YP_008409476.1 | NC_022059_p83 | hypothetical protein | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 52367 | 52627 |
| YP_008409496.1 | NC_022059_p103 | hypothetical protein | phrog_2785 | unknown function | unknown function | 1 | 62462 | 62818 |
| YP_008409479.1 | NC_022059_p86 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 53178 | 53540 |