Genomic map of Mycobacterium phage Velveteen (NC_022060)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022060
Definition
Mycobacteriophage Velveteen, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
DB of origin
REFSEQ
Length
54314
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
100
%GC
61.46
Number of singletons
1
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008409573.1 NC_022060_p36 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision -1 27512 27637
YP_008409578.1 NC_022060_p41 DNA damage inducible protein D-like protein phrog_130 anti-repressor Ant transcription regulation 1 30882 31748
YP_008409607.1 NC_022060_p70 hypothetical protein singleton unknown function unknown function 1 44296 44475
YP_008409561.1 NC_022060_p24 hypothetical protein phrog_747 unknown function unknown function 1 22110 22331
YP_008409631.1 NC_022060_p94 hypothetical protein phrog_11849 membrane protein moron, auxiliary metabolic gene and host takeover 1 50906 51058
YP_008409567.1 NC_022060_p30 DnaQ-like exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 25590 26411
YP_008409546.1 NC_022060_p9 hypothetical protein phrog_763 head-tail adaptor connector 1 6295 6624
YP_008409550.1 NC_022060_p13 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8383 9319
YP_008409632.1 NC_022060_p95 hypothetical protein phrog_1186 unknown function unknown function 1 51144 51557
YP_008409582.1 NC_022060_p45 hypothetical protein phrog_1840 excisionase integration and excision 1 32920 33180
YP_008409586.1 NC_022060_p49 hypothetical protein phrog_8015 unknown function unknown function 1 34179 34460
YP_008409565.1 NC_022060_p28 holin phrog_443 holin lysis 1 24741 24974
YP_008409548.1 NC_022060_p11 hypothetical protein phrog_813 head-tail adaptor connector 1 6947 7351
YP_008409617.1 NC_022060_p80 hypothetical protein phrog_4152 unknown function unknown function 1 47050 47178
YP_008409547.1 NC_022060_p10 hypothetical protein phrog_1929 head-tail connector protein connector 1 6631 6957
YP_008409574.1 NC_022060_p37 integrase Y-int phrog_1 integrase integration and excision 1 27903 29021
YP_008409566.1 NC_022060_p29 hypothetical protein phrog_404 minor tail protein tail 1 24971 25345
YP_008409576.1 NC_022060_p39 immunity repressor phrog_2838 transcriptional repressor transcription regulation -1 29802 30335
YP_008409621.1 NC_022060_p84 hypothetical protein phrog_1545 unknown function unknown function 1 47835 47972
YP_008409635.1 NC_022060_p98 polypeptide N-acetylgalactosaminyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 51967 53403
YP_008409636.1 NC_022060_p99 hypothetical protein phrog_1693 unknown function unknown function 1 53400 53612
YP_008409568.1 NC_022060_p31 hypothetical protein phrog_1791 unknown function unknown function 1 26427 26717
YP_008409569.1 NC_022060_p32 hypothetical protein phrog_1839 unknown function unknown function 1 26710 26802
YP_008409559.1 NC_022060_p22 hypothetical protein phrog_240 head protein head and packaging 1 21480 21863
YP_008409571.1 NC_022060_p34 hypothetical protein phrog_3693 unknown function unknown function -1 27170 27370
YP_008409564.1 NC_022060_p27 LysB phrog_102 endolysin lysis 1 23733 24731
YP_008409580.1 NC_022060_p43 hypothetical protein phrog_5253 unknown function unknown function 1 32323 32622
YP_008409610.1 NC_022060_p73 hypothetical protein phrog_1573 DNA methyltransferase other 1 44943 45320
YP_008409572.1 NC_022060_p35 hypothetical protein phrog_2437 unknown function unknown function -1 27361 27528
YP_008409634.1 NC_022060_p97 hypothetical protein phrog_2057 unknown function unknown function 1 51789 51950
YP_008409626.1 NC_022060_p89 GIY-YIG endonuclease phrog_3312 endonuclease DNA, RNA and nucleotide metabolism 1 48991 49530
YP_008409577.1 NC_022060_p40 CRO protein phrog_6463 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 30502 30825
YP_008409624.1 NC_022060_p87 hypothetical protein phrog_10123 unknown function unknown function 1 48350 48634
YP_008409619.1 NC_022060_p82 hypothetical protein phrog_6540 unknown function unknown function 1 47363 47659
YP_008409579.1 NC_022060_p42 hypothetical protein phrog_14857 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 31745 32326
YP_008409604.1 NC_022060_p67 hypothetical protein phrog_5500 unknown function unknown function 1 42824 43042
YP_008409611.1 NC_022060_p74 hypothetical protein phrog_33993 unknown function unknown function 1 45317 45484
YP_008409613.1 NC_022060_p76 hypothetical protein phrog_2021 unknown function unknown function 1 45898 46242
YP_008409618.1 NC_022060_p81 hypothetical protein phrog_1901 unknown function unknown function 1 47175 47366
YP_008409554.1 NC_022060_p17 minor tail protein phrog_110 minor tail protein tail 1 14635 16344
YP_008409575.1 NC_022060_p38 hypothetical protein phrog_1948 unknown function unknown function -1 29084 29536
YP_008409595.1 NC_022060_p58 hypothetical protein phrog_2060 DNA methyltransferase other 1 37375 37716
YP_008409616.1 NC_022060_p79 hypothetical protein phrog_10032 unknown function unknown function 1 46829 47053
YP_008409609.1 NC_022060_p72 hypothetical protein phrog_1943 unknown function unknown function 1 44752 44946
YP_008409606.1 NC_022060_p69 hypothetical protein phrog_4296 unknown function unknown function 1 43941 44303
YP_008409597.1 NC_022060_p60 RecA phrog_1366 unknown function unknown function 1 38174 39151
YP_008409620.1 NC_022060_p83 hypothetical protein phrog_1091 unknown function unknown function 1 47656 47835
YP_008409593.1 NC_022060_p56 hypothetical protein phrog_2078 unknown function unknown function 1 36993 37148
YP_008409602.1 NC_022060_p65 hypothetical protein phrog_2070 unknown function unknown function 1 42387 42548
YP_008409562.1 NC_022060_p25 hypothetical protein phrog_5492 unknown function unknown function 1 22328 22501
YP_008409587.1 NC_022060_p50 hypothetical protein phrog_1849 unknown function unknown function 1 34536 34817
YP_008409581.1 NC_022060_p44 hypothetical protein phrog_2025 unknown function unknown function 1 32619 32831
YP_008409591.1 NC_022060_p54 HTH DNA binding protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 35996 36349
YP_008409601.1 NC_022060_p64 hypothetical protein phrog_2704 unknown function unknown function 1 42244 42390
YP_008409590.1 NC_022060_p53 HTH DNA binding protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 35652 35999
YP_008409592.1 NC_022060_p55 hypothetical protein phrog_1333 unknown function unknown function 1 36346 36993
YP_008409629.1 NC_022060_p92 hypothetical protein phrog_6481 unknown function unknown function 1 50515 50724
YP_008409594.1 NC_022060_p57 hypothetical protein phrog_1834 unknown function unknown function 1 37148 37378
YP_008409545.1 NC_022060_p8 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 5927 6298
YP_008409544.1 NC_022060_p7 major capsid protein phrog_10 major head protein head and packaging 1 5007 5915
YP_008409552.1 NC_022060_p15 tape measure protein phrog_1942 tail length tape measure protein tail 1 9337 12867
YP_008409630.1 NC_022060_p93 hypothetical protein phrog_1694 unknown function unknown function 1 50724 50909
YP_008409555.1 NC_022060_p18 minor tail subunit phrog_732 minor tail protein tail 1 16381 17229
YP_008409608.1 NC_022060_p71 hypothetical protein phrog_11384 unknown function unknown function 1 44468 44755
YP_008409627.1 NC_022060_p90 hypothetical protein phrog_1467 unknown function unknown function 1 49527 50198
YP_008409605.1 NC_022060_p68 hypothetical protein phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 43039 43944
YP_008409622.1 NC_022060_p85 hypothetical protein phrog_5186 unknown function unknown function 1 47969 48142
YP_008409583.1 NC_022060_p46 hypothetical protein phrog_1816 unknown function unknown function 1 33177 33368
YP_008409585.1 NC_022060_p48 hypothetical protein phrog_1797 unknown function unknown function 1 33538 34161
YP_008409542.1 NC_022060_p5 capsid maturation protease phrog_193 head maturation protease head and packaging 1 3604 4329
YP_008409539.1 NC_022060_p2 small subunit of terminase phrog_4479 terminase small subunit head and packaging 1 445 699
YP_008409600.1 NC_022060_p63 hypothetical protein phrog_7443 unknown function unknown function 1 42023 42244
YP_008409599.1 NC_022060_p62 hypothetical protein phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 39507 42026
YP_008409589.1 NC_022060_p52 hypothetical protein phrog_1333 unknown function unknown function 1 35161 35655
YP_008409596.1 NC_022060_p59 hypothetical protein phrog_5168 unknown function unknown function 1 37713 38177
YP_008409637.1 NC_022060_p100 glycosyltransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 53609 54220
YP_008409614.1 NC_022060_p77 hypothetical protein phrog_647 unknown function unknown function 1 46239 46481
YP_008409588.1 NC_022060_p51 hypothetical protein phrog_658 unknown function unknown function 1 34814 35161
YP_008409558.1 NC_022060_p21 hypothetical protein phrog_6030 unknown function unknown function 1 21241 21480
YP_008409557.1 NC_022060_p20 hypothetical protein phrog_416 minor tail protein tail 1 20087 21244
YP_008409615.1 NC_022060_p78 hypothetical protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 46484 46816
YP_008409570.1 NC_022060_p33 hypothetical protein phrog_21631 unknown function unknown function -1 26908 27177
YP_008409551.1 NC_022060_p14 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8383 8934
YP_008409553.1 NC_022060_p16 minor tail subunit phrog_106 minor tail protein tail 1 12868 14577
YP_008409538.1 NC_022060_p1 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41 373
YP_008409623.1 NC_022060_p86 hypothetical protein phrog_2278 unknown function unknown function 1 48195 48353
YP_008409625.1 NC_022060_p88 hypothetical protein phrog_2247 unknown function unknown function 1 48631 48894
YP_008409603.1 NC_022060_p66 hypothetical protein phrog_6193 unknown function unknown function 1 42681 42827
YP_008409560.1 NC_022060_p23 hypothetical protein phrog_1172 unknown function unknown function 1 21863 22039
YP_008409541.1 NC_022060_p4 hypothetical protein phrog_104 portal protein head and packaging 1 2199 3620
YP_008409543.1 NC_022060_p6 scaffolding protein phrog_4638 head scaffolding protein head and packaging 1 4408 4944
YP_008409612.1 NC_022060_p75 hypothetical protein phrog_647 unknown function unknown function 1 45597 45905
YP_008409540.1 NC_022060_p3 hypothetical protein phrog_2 terminase large subunit head and packaging 1 671 2158
YP_008409598.1 NC_022060_p61 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 39148 39510
YP_008409556.1 NC_022060_p19 minor tail protein phrog_346 minor tail protein tail 1 17226 20090
YP_008409563.1 NC_022060_p26 LysA phrog_700 endolysin lysis 1 22498 23733
YP_008409628.1 NC_022060_p91 hypothetical protein phrog_1869 unknown function unknown function 1 50341 50508
YP_008409549.1 NC_022060_p12 major tail subunit phrog_476 major tail protein tail 1 7460 8269
YP_008409584.1 NC_022060_p47 hypothetical protein phrog_3381 unknown function unknown function 1 33365 33541
YP_008409633.1 NC_022060_p96 hypothetical protein phrog_1385 unknown function unknown function 1 51554 51796