| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_022060 |
Definition |
Mycobacteriophage Velveteen, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus. |
DB of origin |
REFSEQ |
Length |
54314 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
100 |
%GC |
61.46 |
Number of singletons |
1 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008409573.1 | NC_022060_p36 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 27512 | 27637 |
| YP_008409578.1 | NC_022060_p41 | DNA damage inducible protein D-like protein | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 30882 | 31748 |
| YP_008409607.1 | NC_022060_p70 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44296 | 44475 |
| YP_008409561.1 | NC_022060_p24 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 22110 | 22331 |
| YP_008409631.1 | NC_022060_p94 | hypothetical protein | phrog_11849 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 50906 | 51058 |
| YP_008409567.1 | NC_022060_p30 | DnaQ-like exonuclease | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 25590 | 26411 |
| YP_008409546.1 | NC_022060_p9 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 6295 | 6624 |
| YP_008409550.1 | NC_022060_p13 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8383 | 9319 |
| YP_008409632.1 | NC_022060_p95 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 51144 | 51557 |
| YP_008409582.1 | NC_022060_p45 | hypothetical protein | phrog_1840 | excisionase | integration and excision | 1 | 32920 | 33180 |
| YP_008409586.1 | NC_022060_p49 | hypothetical protein | phrog_8015 | unknown function | unknown function | 1 | 34179 | 34460 |
| YP_008409565.1 | NC_022060_p28 | holin | phrog_443 | holin | lysis | 1 | 24741 | 24974 |
| YP_008409548.1 | NC_022060_p11 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 6947 | 7351 |
| YP_008409617.1 | NC_022060_p80 | hypothetical protein | phrog_4152 | unknown function | unknown function | 1 | 47050 | 47178 |
| YP_008409547.1 | NC_022060_p10 | hypothetical protein | phrog_1929 | head-tail connector protein | connector | 1 | 6631 | 6957 |
| YP_008409574.1 | NC_022060_p37 | integrase Y-int | phrog_1 | integrase | integration and excision | 1 | 27903 | 29021 |
| YP_008409566.1 | NC_022060_p29 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 24971 | 25345 |
| YP_008409576.1 | NC_022060_p39 | immunity repressor | phrog_2838 | transcriptional repressor | transcription regulation | -1 | 29802 | 30335 |
| YP_008409621.1 | NC_022060_p84 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 47835 | 47972 |
| YP_008409635.1 | NC_022060_p98 | polypeptide N-acetylgalactosaminyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 51967 | 53403 |
| YP_008409636.1 | NC_022060_p99 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 53400 | 53612 |
| YP_008409568.1 | NC_022060_p31 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 26427 | 26717 |
| YP_008409569.1 | NC_022060_p32 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 26710 | 26802 |
| YP_008409559.1 | NC_022060_p22 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 21480 | 21863 |
| YP_008409571.1 | NC_022060_p34 | hypothetical protein | phrog_3693 | unknown function | unknown function | -1 | 27170 | 27370 |
| YP_008409564.1 | NC_022060_p27 | LysB | phrog_102 | endolysin | lysis | 1 | 23733 | 24731 |
| YP_008409580.1 | NC_022060_p43 | hypothetical protein | phrog_5253 | unknown function | unknown function | 1 | 32323 | 32622 |
| YP_008409610.1 | NC_022060_p73 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | 1 | 44943 | 45320 |
| YP_008409572.1 | NC_022060_p35 | hypothetical protein | phrog_2437 | unknown function | unknown function | -1 | 27361 | 27528 |
| YP_008409634.1 | NC_022060_p97 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 51789 | 51950 |
| YP_008409626.1 | NC_022060_p89 | GIY-YIG endonuclease | phrog_3312 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 48991 | 49530 |
| YP_008409577.1 | NC_022060_p40 | CRO protein | phrog_6463 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30502 | 30825 |
| YP_008409624.1 | NC_022060_p87 | hypothetical protein | phrog_10123 | unknown function | unknown function | 1 | 48350 | 48634 |
| YP_008409619.1 | NC_022060_p82 | hypothetical protein | phrog_6540 | unknown function | unknown function | 1 | 47363 | 47659 |
| YP_008409579.1 | NC_022060_p42 | hypothetical protein | phrog_14857 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 31745 | 32326 |
| YP_008409604.1 | NC_022060_p67 | hypothetical protein | phrog_5500 | unknown function | unknown function | 1 | 42824 | 43042 |
| YP_008409611.1 | NC_022060_p74 | hypothetical protein | phrog_33993 | unknown function | unknown function | 1 | 45317 | 45484 |
| YP_008409613.1 | NC_022060_p76 | hypothetical protein | phrog_2021 | unknown function | unknown function | 1 | 45898 | 46242 |
| YP_008409618.1 | NC_022060_p81 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 47175 | 47366 |
| YP_008409554.1 | NC_022060_p17 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 14635 | 16344 |
| YP_008409575.1 | NC_022060_p38 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 29084 | 29536 |
| YP_008409595.1 | NC_022060_p58 | hypothetical protein | phrog_2060 | DNA methyltransferase | other | 1 | 37375 | 37716 |
| YP_008409616.1 | NC_022060_p79 | hypothetical protein | phrog_10032 | unknown function | unknown function | 1 | 46829 | 47053 |
| YP_008409609.1 | NC_022060_p72 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 44752 | 44946 |
| YP_008409606.1 | NC_022060_p69 | hypothetical protein | phrog_4296 | unknown function | unknown function | 1 | 43941 | 44303 |
| YP_008409597.1 | NC_022060_p60 | RecA | phrog_1366 | unknown function | unknown function | 1 | 38174 | 39151 |
| YP_008409620.1 | NC_022060_p83 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 47656 | 47835 |
| YP_008409593.1 | NC_022060_p56 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 36993 | 37148 |
| YP_008409602.1 | NC_022060_p65 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 42387 | 42548 |
| YP_008409562.1 | NC_022060_p25 | hypothetical protein | phrog_5492 | unknown function | unknown function | 1 | 22328 | 22501 |
| YP_008409587.1 | NC_022060_p50 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 34536 | 34817 |
| YP_008409581.1 | NC_022060_p44 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 32619 | 32831 |
| YP_008409591.1 | NC_022060_p54 | HTH DNA binding protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 35996 | 36349 |
| YP_008409601.1 | NC_022060_p64 | hypothetical protein | phrog_2704 | unknown function | unknown function | 1 | 42244 | 42390 |
| YP_008409590.1 | NC_022060_p53 | HTH DNA binding protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 35652 | 35999 |
| YP_008409592.1 | NC_022060_p55 | hypothetical protein | phrog_1333 | unknown function | unknown function | 1 | 36346 | 36993 |
| YP_008409629.1 | NC_022060_p92 | hypothetical protein | phrog_6481 | unknown function | unknown function | 1 | 50515 | 50724 |
| YP_008409594.1 | NC_022060_p57 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 37148 | 37378 |
| YP_008409545.1 | NC_022060_p8 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 5927 | 6298 |
| YP_008409544.1 | NC_022060_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 5007 | 5915 |
| YP_008409552.1 | NC_022060_p15 | tape measure protein | phrog_1942 | tail length tape measure protein | tail | 1 | 9337 | 12867 |
| YP_008409630.1 | NC_022060_p93 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 50724 | 50909 |
| YP_008409555.1 | NC_022060_p18 | minor tail subunit | phrog_732 | minor tail protein | tail | 1 | 16381 | 17229 |
| YP_008409608.1 | NC_022060_p71 | hypothetical protein | phrog_11384 | unknown function | unknown function | 1 | 44468 | 44755 |
| YP_008409627.1 | NC_022060_p90 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 49527 | 50198 |
| YP_008409605.1 | NC_022060_p68 | hypothetical protein | phrog_2149 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 43039 | 43944 |
| YP_008409622.1 | NC_022060_p85 | hypothetical protein | phrog_5186 | unknown function | unknown function | 1 | 47969 | 48142 |
| YP_008409583.1 | NC_022060_p46 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 33177 | 33368 |
| YP_008409585.1 | NC_022060_p48 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 33538 | 34161 |
| YP_008409542.1 | NC_022060_p5 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 3604 | 4329 |
| YP_008409539.1 | NC_022060_p2 | small subunit of terminase | phrog_4479 | terminase small subunit | head and packaging | 1 | 445 | 699 |
| YP_008409600.1 | NC_022060_p63 | hypothetical protein | phrog_7443 | unknown function | unknown function | 1 | 42023 | 42244 |
| YP_008409599.1 | NC_022060_p62 | hypothetical protein | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 39507 | 42026 |
| YP_008409589.1 | NC_022060_p52 | hypothetical protein | phrog_1333 | unknown function | unknown function | 1 | 35161 | 35655 |
| YP_008409596.1 | NC_022060_p59 | hypothetical protein | phrog_5168 | unknown function | unknown function | 1 | 37713 | 38177 |
| YP_008409637.1 | NC_022060_p100 | glycosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 53609 | 54220 |
| YP_008409614.1 | NC_022060_p77 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 46239 | 46481 |
| YP_008409588.1 | NC_022060_p51 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 34814 | 35161 |
| YP_008409558.1 | NC_022060_p21 | hypothetical protein | phrog_6030 | unknown function | unknown function | 1 | 21241 | 21480 |
| YP_008409557.1 | NC_022060_p20 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 20087 | 21244 |
| YP_008409615.1 | NC_022060_p78 | hypothetical protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 46484 | 46816 |
| YP_008409570.1 | NC_022060_p33 | hypothetical protein | phrog_21631 | unknown function | unknown function | -1 | 26908 | 27177 |
| YP_008409551.1 | NC_022060_p14 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8383 | 8934 |
| YP_008409553.1 | NC_022060_p16 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 12868 | 14577 |
| YP_008409538.1 | NC_022060_p1 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41 | 373 |
| YP_008409623.1 | NC_022060_p86 | hypothetical protein | phrog_2278 | unknown function | unknown function | 1 | 48195 | 48353 |
| YP_008409625.1 | NC_022060_p88 | hypothetical protein | phrog_2247 | unknown function | unknown function | 1 | 48631 | 48894 |
| YP_008409603.1 | NC_022060_p66 | hypothetical protein | phrog_6193 | unknown function | unknown function | 1 | 42681 | 42827 |
| YP_008409560.1 | NC_022060_p23 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 21863 | 22039 |
| YP_008409541.1 | NC_022060_p4 | hypothetical protein | phrog_104 | portal protein | head and packaging | 1 | 2199 | 3620 |
| YP_008409543.1 | NC_022060_p6 | scaffolding protein | phrog_4638 | head scaffolding protein | head and packaging | 1 | 4408 | 4944 |
| YP_008409612.1 | NC_022060_p75 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 45597 | 45905 |
| YP_008409540.1 | NC_022060_p3 | hypothetical protein | phrog_2 | terminase large subunit | head and packaging | 1 | 671 | 2158 |
| YP_008409598.1 | NC_022060_p61 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 39148 | 39510 |
| YP_008409556.1 | NC_022060_p19 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 17226 | 20090 |
| YP_008409563.1 | NC_022060_p26 | LysA | phrog_700 | endolysin | lysis | 1 | 22498 | 23733 |
| YP_008409628.1 | NC_022060_p91 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 50341 | 50508 |
| YP_008409549.1 | NC_022060_p12 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 7460 | 8269 |
| YP_008409584.1 | NC_022060_p47 | hypothetical protein | phrog_3381 | unknown function | unknown function | 1 | 33365 | 33541 |
| YP_008409633.1 | NC_022060_p96 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 51554 | 51796 |