Genomic map of Mycobacterium phage Contagion (NC_022065)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022065
Definition
Mycobacterium phage Contagion, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus.
DB of origin
REFSEQ
Length
74533
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
140
%GC
63.05
Number of singletons
0
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008410024.1 NC_022065_p6 hypothetical protein phrog_4101 unknown function unknown function -1 1309 1551
YP_008410114.1 NC_022065_p96 ssDNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 59261 59701
YP_008410063.1 NC_022065_p45 hypothetical protein phrog_2702 unknown function unknown function -1 35270 35485
YP_008410057.1 NC_022065_p39 Lsr2 phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 33303 33689
YP_008410103.1 NC_022065_p85 hypothetical protein phrog_2495 unknown function unknown function 1 53312 53680
YP_008410151.1 NC_022065_p133 hypothetical protein phrog_1438 unknown function unknown function -1 72176 72349
YP_008410095.1 NC_022065_p77 DnaB-like helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 49301 50563
YP_008410131.1 NC_022065_p113 hypothetical protein phrog_2279 unknown function unknown function 1 66195 66407
YP_008410112.1 NC_022065_p94 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 57617 58159
YP_008410156.1 NC_022065_p138 hypothetical protein phrog_2904 unknown function unknown function 1 73319 73666
YP_008410141.1 NC_022065_p123 hypothetical protein phrog_2579 ParB C-terminal domain DNA, RNA and nucleotide metabolism -1 68625 69014
YP_008410105.1 NC_022065_p87 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 53772 55097
YP_008410097.1 NC_022065_p79 hypothetical protein phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 50730 51005
YP_008410070.1 NC_022065_p52 immunity repressor phrog_2745 transcriptional repressor transcription regulation -1 38990 39430
YP_008410056.1 NC_022065_p38 hypothetical protein phrog_9947 Lsr2-like DNA bridging protein DNA, RNA and nucleotide metabolism -1 33121 33300
YP_008410139.1 NC_022065_p121 hypothetical protein phrog_3016 unknown function unknown function 1 67825 67986
YP_008410025.1 NC_022065_p7 hypothetical protein phrog_2202 unknown function unknown function -1 1551 1859
YP_008410110.1 NC_022065_p92 hypothetical protein phrog_889 unknown function unknown function 1 56840 57283
YP_008410020.1 NC_022065_p2 hypothetical protein phrog_4110 unknown function unknown function 1 267 449
YP_008410108.1 NC_022065_p90 hypothetical protein phrog_2853 unknown function unknown function 1 56229 56387
YP_008410021.1 NC_022065_p3 hypothetical protein phrog_2829 unknown function unknown function 1 446 604
YP_008410125.1 NC_022065_p107 hypothetical protein phrog_2252 endolysin; inhibits RNA polymerase lysis 1 63424 63903
YP_008410140.1 NC_022065_p122 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 68365 68628
YP_008410037.1 NC_022065_p19 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 11977 12438
YP_008410033.1 NC_022065_p15 hypothetical protein phrog_1531 head closure connector 1 9765 10100
YP_008410041.1 NC_022065_p23 minor tail protein phrog_110 minor tail protein tail 1 19253 20932
YP_008410118.1 NC_022065_p100 hypothetical protein phrog_2757 unknown function unknown function 1 61149 61439
YP_008410136.1 NC_022065_p118 hypothetical protein phrog_2296 unknown function unknown function 1 67397 67534
YP_008410049.1 NC_022065_p31 lysin A phrog_317 endolysin lysis 1 29145 30647
YP_008410143.1 NC_022065_p125 hypothetical protein phrog_3034 unknown function unknown function -1 69389 69757
YP_008410158.1 NC_022065_p140 HNH endonuclease phrog_589 HNH endonuclease DNA, RNA and nucleotide metabolism 1 73952 74299
YP_008410081.1 NC_022065_p63 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 43364 44332
YP_008410072.1 NC_022065_p54 hypothetical protein phrog_2852 unknown function unknown function 1 39742 39879
YP_008410054.1 NC_022065_p36 NrdH phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 32639 32884
YP_008410073.1 NC_022065_p55 pentapeptide repeat domain protein phrog_923 unknown function unknown function 1 39876 40721
YP_008410124.1 NC_022065_p106 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 63047 63421
YP_008410130.1 NC_022065_p112 hypothetical protein phrog_2755 unknown function unknown function 1 66029 66202
YP_008410028.1 NC_022065_p10 portal protein phrog_12 portal protein head and packaging 1 4784 6343
YP_008410068.1 NC_022065_p50 hypothetical protein phrog_2842 unknown function unknown function 1 37905 38144
YP_008410155.1 NC_022065_p137 hypothetical protein phrog_5130 unknown function unknown function -1 73063 73308
YP_008410090.1 NC_022065_p72 hypothetical protein phrog_289 GTP-binding domain other 1 47376 47789
YP_008410117.1 NC_022065_p99 hypothetical protein phrog_2785 unknown function unknown function 1 60792 61148
YP_008410039.1 NC_022065_p21 tape measure protein phrog_2723 tail length tape measure protein tail 1 12841 17574
YP_008410086.1 NC_022065_p68 hypothetical protein phrog_1389 unknown function unknown function 1 46231 46599
YP_008410128.1 NC_022065_p110 RecA phrog_97 UvsX-like recombinase other 1 64946 65908
YP_008410079.1 NC_022065_p61 hypothetical protein phrog_16636 secreted protein other 1 42565 43041
YP_008410067.1 NC_022065_p49 integrase (Y-int) phrog_1 integrase integration and excision 1 36885 37766
YP_008410038.1 NC_022065_p20 tail assembly chaperone phrog_5940 tail assembly chaperone tail 1 12570 12848
YP_008410043.1 NC_022065_p25 minor tail protein phrog_346 minor tail protein tail 1 21791 24187
YP_008410023.1 NC_022065_p5 terminase small subunit phrog_83 terminase small subunit head and packaging 1 776 1237
YP_008410104.1 NC_022065_p86 hypothetical protein phrog_2844 unknown function unknown function 1 53653 53775
YP_008410052.1 NC_022065_p34 lysin B phrog_102 endolysin lysis 1 31362 32219
YP_008410026.1 NC_022065_p8 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1904 4567
YP_008410148.1 NC_022065_p130 hypothetical protein phrog_2287 unknown function unknown function -1 70996 71232
YP_008410116.1 NC_022065_p98 hypothetical protein phrog_1454 unknown function unknown function 1 60598 60795
YP_008410058.1 NC_022065_p40 hypothetical protein phrog_647 unknown function unknown function -1 33737 34345
YP_008410157.1 NC_022065_p139 hypothetical protein phrog_2762 unknown function unknown function 1 73741 73962
YP_008410032.1 NC_022065_p14 hypothetical protein phrog_442 head-tail adaptor connector 1 9186 9752
YP_008410089.1 NC_022065_p71 hypothetical protein phrog_2793 unknown function unknown function 1 47146 47379
YP_008410069.1 NC_022065_p51 hypothetical protein phrog_950 unknown function unknown function -1 38122 38895
YP_008410152.1 NC_022065_p134 hypothetical protein phrog_2772 unknown function unknown function -1 72346 72591
YP_008410065.1 NC_022065_p47 hypothetical protein phrog_2759 unknown function unknown function -1 35650 36045
YP_008410094.1 NC_022065_p76 hypothetical protein phrog_572 unknown function unknown function 1 48973 49308
YP_008410111.1 NC_022065_p93 hypothetical protein phrog_2788 unknown function unknown function 1 57285 57620
YP_008410061.1 NC_022065_p43 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 34877 35044
YP_008410099.1 NC_022065_p81 hypothetical protein phrog_3836 unknown function unknown function 1 51194 51559
YP_008410078.1 NC_022065_p60 hypothetical protein phrog_2221 unknown function unknown function 1 42392 42520
YP_008410062.1 NC_022065_p44 hypothetical protein phrog_2893 unknown function unknown function -1 35041 35277
YP_008410129.1 NC_022065_p111 hypothetical protein phrog_2965 unknown function unknown function 1 65905 66042
YP_008410083.1 NC_022065_p65 Erf protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 44735 45457
YP_008410154.1 NC_022065_p136 hypothetical protein phrog_5970 unknown function unknown function -1 72803 73060
YP_008410064.1 NC_022065_p46 hypothetical protein phrog_2815 unknown function unknown function -1 35504 35650
YP_008410109.1 NC_022065_p91 hypothetical protein phrog_889 unknown function unknown function 1 56384 56836
YP_008410138.1 NC_022065_p120 hypothetical protein phrog_2897 unknown function unknown function 1 67710 67841
YP_008410106.1 NC_022065_p88 hypothetical protein phrog_1590 unknown function unknown function 1 55134 55955
YP_008410092.1 NC_022065_p74 hypothetical protein phrog_1673 unknown function unknown function 1 48093 48329
YP_008410126.1 NC_022065_p108 DnaQ-like exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 63914 64699
YP_008410113.1 NC_022065_p95 DNA methylase phrog_67 DNA methyltransferase other 1 58156 59268
YP_008410035.1 NC_022065_p17 hypothetical protein phrog_813 head-tail adaptor connector 1 10455 10859
YP_008410059.1 NC_022065_p41 hypothetical protein phrog_722 unknown function unknown function -1 34342 34707
YP_008410096.1 NC_022065_p78 hypothetical protein phrog_1091 unknown function unknown function 1 50560 50748
YP_008410132.1 NC_022065_p114 hypothetical protein phrog_3062 unknown function unknown function 1 66469 66642
YP_008410101.1 NC_022065_p83 hypothetical protein phrog_2894 unknown function unknown function 1 51915 52109
YP_008410055.1 NC_022065_p37 hypothetical protein phrog_27547 unknown function unknown function -1 32924 33043
YP_008410142.1 NC_022065_p124 hypothetical protein phrog_2942 unknown function unknown function -1 69132 69392
YP_008410134.1 NC_022065_p116 hypothetical protein phrog_2764 unknown function unknown function 1 67049 67216
YP_008410034.1 NC_022065_p16 hypothetical protein phrog_2805 minor tail protein tail 1 10088 10477
YP_008410077.1 NC_022065_p59 hypothetical protein phrog_2147 unknown function unknown function 1 42049 42426
YP_008410149.1 NC_022065_p131 hypothetical protein phrog_2883 unknown function unknown function -1 71248 71784
YP_008410093.1 NC_022065_p75 hypothetical protein phrog_1882 unknown function unknown function 1 48326 48976
YP_008410031.1 NC_022065_p13 hypothetical protein phrog_2796 head-tail connector protein connector 1 8995 9186
YP_008410022.1 NC_022065_p4 hypothetical protein phrog_2775 unknown function unknown function 1 601 783
YP_008410075.1 NC_022065_p57 hypothetical protein phrog_2800 unknown function unknown function 1 40866 41144
YP_008410042.1 NC_022065_p24 minor tail protein phrog_732 minor tail protein tail 1 20941 21774
YP_008410107.1 NC_022065_p89 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 55952 56212
YP_008410088.1 NC_022065_p70 hypothetical protein phrog_1622 unknown function unknown function 1 46970 47149
YP_008410121.1 NC_022065_p103 hypothetical protein phrog_15491 unknown function unknown function 1 62071 62187
YP_008410066.1 NC_022065_p48 hypothetical protein phrog_2847 unknown function unknown function -1 36332 36634
YP_008410145.1 NC_022065_p127 hypothetical protein phrog_1587 unknown function unknown function -1 70227 70556
YP_008410135.1 NC_022065_p117 hypothetical protein phrog_2823 unknown function unknown function 1 67200 67400
YP_008410091.1 NC_022065_p73 HNH endonuclease domain protein phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 47786 48103
YP_008410133.1 NC_022065_p115 hypothetical protein phrog_2174 unknown function unknown function 1 66639 67052
YP_008410137.1 NC_022065_p119 hypothetical protein phrog_2925 unknown function unknown function 1 67531 67710
YP_008410115.1 NC_022065_p97 Clp protease phrog_94 head maturation protease head and packaging 1 59790 60596
YP_008410047.1 NC_022065_p29 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 28469 28654
YP_008410051.1 NC_022065_p33 hypothetical protein phrog_2424 unknown function unknown function 1 31027 31365
YP_008410085.1 NC_022065_p67 hypothetical protein phrog_2771 unknown function unknown function 1 45761 46231
YP_008410082.1 NC_022065_p64 hypothetical protein phrog_572 unknown function unknown function 1 44329 44742
YP_008410150.1 NC_022065_p132 hypothetical protein phrog_3174 unknown function unknown function -1 71788 72171
YP_008410050.1 NC_022065_p32 holin phrog_526 holin lysis 1 30651 31034
YP_008410060.1 NC_022065_p42 hypothetical protein phrog_1155 unknown function unknown function -1 34704 34877
YP_008410030.1 NC_022065_p12 major capsid protein phrog_10 major head protein head and packaging 1 7435 8928
YP_008410127.1 NC_022065_p109 hypothetical protein phrog_1941 unknown function unknown function 1 64696 64938
YP_008410074.1 NC_022065_p56 hypothetical protein phrog_2463 unknown function unknown function 1 40723 40869
YP_008410084.1 NC_022065_p66 hypothetical protein phrog_2750 unknown function unknown function 1 45450 45761
YP_008410046.1 NC_022065_p28 hypothetical protein phrog_644 unknown function unknown function 1 28054 28482
YP_008410029.1 NC_022065_p11 capsid maturation protease phrog_2753 head maturation protease head and packaging 1 6346 7347
YP_008410120.1 NC_022065_p102 hypothetical protein phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 61808 62098
YP_008410100.1 NC_022065_p82 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 51556 51918
YP_008410053.1 NC_022065_p35 hypothetical protein phrog_726 unknown function unknown function 1 32216 32632
YP_008410027.1 NC_022065_p9 hypothetical protein phrog_2845 unknown function unknown function 1 4579 4800
YP_008410153.1 NC_022065_p135 hypothetical protein phrog_2795 unknown function unknown function -1 72588 72800
YP_008410122.1 NC_022065_p104 hypothetical protein phrog_2846 unknown function unknown function 1 62552 62776
YP_008410044.1 NC_022065_p26 D-ala-D-ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 24184 27021
YP_008410102.1 NC_022065_p84 Pnk protein phrog_505 polynucleotide kinase other 1 52264 53205
YP_008410071.1 NC_022065_p53 hypothetical protein phrog_3071 unknown function unknown function 1 39647 39745
YP_008410048.1 NC_022065_p30 hypothetical protein phrog_411 unknown function unknown function 1 28787 29071
YP_008410119.1 NC_022065_p101 hypothetical protein phrog_1969 unknown function unknown function 1 61444 61755
YP_008410098.1 NC_022065_p80 hypothetical protein phrog_2747 unknown function unknown function 1 50980 51201
YP_008410080.1 NC_022065_p62 hypothetical protein phrog_762 unknown function unknown function 1 43038 43367
YP_008410036.1 NC_022065_p18 major tail subunit phrog_476 major tail protein tail 1 10886 11857
YP_008410146.1 NC_022065_p128 hypothetical protein phrog_4547 unknown function unknown function -1 70558 70875
YP_008410144.1 NC_022065_p126 hypothetical protein phrog_1915 unknown function unknown function -1 69754 70212
YP_008410045.1 NC_022065_p27 hypothetical protein phrog_553 minor tail protein tail 1 27022 27984
YP_008410147.1 NC_022065_p129 hypothetical protein phrog_3730 unknown function unknown function -1 70881 71006
YP_008410087.1 NC_022065_p69 hypothetical protein phrog_572 unknown function unknown function 1 46596 46970
YP_008410076.1 NC_022065_p58 hypothetical protein phrog_2744 unknown function unknown function 1 41688 41993
YP_008410040.1 NC_022065_p22 minor tail protein phrog_106 minor tail protein tail 1 17604 19265
YP_008410123.1 NC_022065_p105 hypothetical protein phrog_1042 unknown function unknown function 1 62773 63036
YP_008410019.1 NC_022065_p1 hypothetical protein phrog_3456 unknown function unknown function 1 34 270