Genomic map of Mycobacterium phage Daenerys (NC_022068)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022068
Definition
Mycobacteriophage Daenerys, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
DB of origin
REFSEQ
Length
58043
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
102
%GC
61.55
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008410652.1 NC_022068_p83 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision 1 51178 51345
YP_008410596.1 NC_022068_p27 hypothetical protein phrog_932 unknown function unknown function 1 25743 25892
YP_008410620.1 NC_022068_p51 WhiB phrog_1333 unknown function unknown function 1 37294 37788
YP_008410661.1 NC_022068_p92 transcriptional regulator phrog_2474 MerR-like transcriptional regulator transcription regulation 1 53725 53949
YP_008410571.1 NC_022068_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 571 2208
YP_008410605.1 NC_022068_p36 hypothetical protein phrog_1791 unknown function unknown function 1 30222 30512
YP_008410619.1 NC_022068_p50 hypothetical protein phrog_658 unknown function unknown function 1 36947 37294
YP_008410585.1 NC_022068_p16 minor tail protein phrog_110 minor tail protein tail 1 14808 16517
YP_008410666.1 NC_022068_p97 hypothetical protein phrog_1385 unknown function unknown function 1 54857 55099
YP_008410668.1 NC_022068_p99 galactosyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 55280 56716
YP_008410607.1 NC_022068_p38 hypothetical protein phrog_2437 unknown function unknown function -1 30769 30918
YP_008410592.1 NC_022068_p23 hypothetical protein phrog_2012 minor tail protein tail 1 23629 24267
YP_008410581.1 NC_022068_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8532 9468
YP_008410608.1 NC_022068_p39 Xis phrog_66 excisionase and transcriptional regulator integration and excision -1 30970 31164
YP_008410615.1 NC_022068_p46 hypothetical protein phrog_2021 unknown function unknown function 1 35343 35726
YP_008410579.1 NC_022068_p10 hypothetical protein phrog_813 head-tail adaptor connector 1 7095 7499
YP_008410589.1 NC_022068_p20 hypothetical protein phrog_2106 minor tail protein tail 1 21820 22983
YP_008410656.1 NC_022068_p87 hypothetical protein phrog_1091 unknown function unknown function 1 52061 52381
YP_008410599.1 NC_022068_p30 lysin A phrog_700 endolysin lysis 1 26326 27519
YP_008410614.1 NC_022068_p45 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 35102 35299
YP_008410575.1 NC_022068_p6 major capsid protein phrog_267 major head protein head and packaging 1 5047 5868
YP_008410582.1 NC_022068_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8532 9083
YP_008410657.1 NC_022068_p88 hypothetical protein phrog_4126 unknown function unknown function 1 52378 52497
YP_008410621.1 NC_022068_p52 hypothetical protein phrog_2096 unknown function unknown function 1 37785 38270
YP_008410612.1 NC_022068_p43 CRO protein phrog_3 transcriptional repressor transcription regulation 1 34432 34665
YP_008410593.1 NC_022068_p24 hypothetical protein phrog_754 minor tail protein tail 1 24264 25088
YP_008410610.1 NC_022068_p41 hypothetical protein phrog_1948 unknown function unknown function -1 32975 33430
YP_008410628.1 NC_022068_p59 hypothetical protein phrog_4657 unknown function unknown function 1 40724 41332
YP_008410594.1 NC_022068_p25 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25094 25291
YP_008410627.1 NC_022068_p58 hypothetical protein phrog_1366 unknown function unknown function 1 39750 40727
YP_008410611.1 NC_022068_p42 immunity repressor phrog_2838 transcriptional repressor transcription regulation -1 33693 34265
YP_008410618.1 NC_022068_p49 hypothetical protein phrog_1849 unknown function unknown function 1 36672 36950
YP_008410595.1 NC_022068_p26 hypothetical protein phrog_411 unknown function unknown function 1 25440 25736
YP_008410624.1 NC_022068_p55 hypothetical protein phrog_2078 unknown function unknown function 1 38907 39059
YP_008410630.1 NC_022068_p61 DNA methylase phrog_67 DNA methyltransferase other 1 41682 43196
YP_008410609.1 NC_022068_p40 integrase phrog_1 integrase integration and excision 1 31596 32897
YP_008410631.1 NC_022068_p62 hypothetical protein phrog_7789 unknown function unknown function 1 43272 43361
YP_008410664.1 NC_022068_p95 hypothetical protein phrog_3813 unknown function unknown function 1 54271 54462
YP_008410635.1 NC_022068_p66 hypothetical protein phrog_2070 unknown function unknown function 1 43953 44123
YP_008410626.1 NC_022068_p57 hypothetical protein phrog_5168 unknown function unknown function 1 39289 39753
YP_008410574.1 NC_022068_p5 scaffolding protein phrog_2592 head scaffolding protein head and packaging 1 4378 5028
YP_008410580.1 NC_022068_p11 major tail subunit phrog_476 major tail protein tail 1 7537 8418
YP_008410602.1 NC_022068_p33 hypothetical protein phrog_404 minor tail protein tail 1 28766 29140
YP_008410644.1 NC_022068_p75 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 48094 48945
YP_008410570.1 NC_022068_p1 hypothetical protein phrog_226 minor tail protein tail 1 108 563
YP_008410642.1 NC_022068_p73 DNA methylase phrog_67 DNA methyltransferase other 1 47291 47959
YP_008410649.1 NC_022068_p80 hypothetical protein phrog_1546 unknown function unknown function 1 49901 50629
YP_008410651.1 NC_022068_p82 hypothetical protein phrog_722 unknown function unknown function 1 50903 51181
YP_008410590.1 NC_022068_p21 hypothetical protein phrog_240 head protein head and packaging 1 22997 23338
YP_008410662.1 NC_022068_p93 hypothetical protein phrog_1869 unknown function unknown function 1 53946 54110
YP_008410658.1 NC_022068_p89 hypothetical protein phrog_2278 unknown function unknown function 1 52494 52730
YP_008410578.1 NC_022068_p9 hypothetical protein phrog_1929 head-tail connector protein connector 1 6809 7105
YP_008410660.1 NC_022068_p91 hypothetical protein phrog_1467 unknown function unknown function 1 52971 53615
YP_008410637.1 NC_022068_p68 hypothetical protein phrog_2259 Rnase H DNA, RNA and nucleotide metabolism 1 44330 44902
YP_008410617.1 NC_022068_p48 hypothetical protein phrog_1797 unknown function unknown function 1 35908 36597
YP_008410622.1 NC_022068_p53 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 38267 38545
YP_008410604.1 NC_022068_p35 DnaQ-like protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 29385 30206
YP_008410573.1 NC_022068_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3596 4351
YP_008410572.1 NC_022068_p3 portal protein phrog_104 portal protein head and packaging 1 2239 3609
YP_008410636.1 NC_022068_p67 hypothetical protein phrog_1311 unknown function unknown function 1 44101 44256
YP_008410588.1 NC_022068_p19 D-ala-D-ala-carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 19934 21823
YP_008410625.1 NC_022068_p56 hypothetical protein phrog_1834 unknown function unknown function 1 39059 39292
YP_008410576.1 NC_022068_p7 hypothetical protein phrog_2377 head-tail adaptor Ad1 connector 1 5880 6446
YP_008410654.1 NC_022068_p85 hypothetical protein phrog_1901 unknown function unknown function 1 51607 51801
YP_008410650.1 NC_022068_p81 hypothetical protein phrog_647 unknown function unknown function 1 50626 50910
YP_008410667.1 NC_022068_p98 hypothetical protein phrog_2057 unknown function unknown function 1 55092 55253
YP_008410629.1 NC_022068_p60 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41329 41685
YP_008410659.1 NC_022068_p90 hypothetical protein phrog_2247 unknown function unknown function 1 52723 52974
YP_008410598.1 NC_022068_p29 hypothetical protein phrog_747 unknown function unknown function 1 26096 26329
YP_008410577.1 NC_022068_p8 hypothetical protein phrog_763 head-tail adaptor connector 1 6443 6772
YP_008410616.1 NC_022068_p47 hypothetical protein phrog_1816 unknown function unknown function 1 35723 35911
YP_008410645.1 NC_022068_p76 hypothetical protein phrog_2080 unknown function unknown function 1 48942 49205
YP_008410648.1 NC_022068_p79 hypothetical protein phrog_9840 unknown function unknown function 1 49773 49904
YP_008410671.1 NC_022068_p102 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 57545 57871
YP_008410669.1 NC_022068_p100 hypothetical protein phrog_1693 unknown function unknown function 1 56719 56925
YP_008410655.1 NC_022068_p86 hypothetical protein phrog_6625 unknown function unknown function 1 51774 52064
YP_008410639.1 NC_022068_p70 methylase phrog_116 DNA methyltransferase other 1 45291 46922
YP_008410584.1 NC_022068_p15 minor tail protein phrog_106 minor tail protein tail 1 13014 14723
YP_008410632.1 NC_022068_p63 DNA methylase phrog_3008 DNA methyltransferase other 1 43336 43587
YP_008410638.1 NC_022068_p69 hypothetical protein phrog_6650 unknown function unknown function 1 44899 45294
YP_008410646.1 NC_022068_p77 hypothetical protein phrog_6275 unknown function unknown function 1 49202 49582
YP_008410653.1 NC_022068_p84 hypothetical protein phrog_2939 unknown function unknown function 1 51398 51610
YP_008410640.1 NC_022068_p71 hypothetical protein phrog_2001 unknown function unknown function 1 46948 47070
YP_008410591.1 NC_022068_p22 hypothetical protein phrog_2005 minor tail protein tail 1 23361 23615
YP_008410583.1 NC_022068_p14 tape measure protein phrog_1942 tail length tape measure protein tail 1 9486 13013
YP_008410603.1 NC_022068_p34 hypothetical protein phrog_2004 unknown function unknown function 1 29165 29398
YP_008410663.1 NC_022068_p94 hypothetical protein phrog_1694 unknown function unknown function 1 54116 54274
YP_008410613.1 NC_022068_p44 hypothetical protein phrog_2025 unknown function unknown function 1 34725 35015
YP_008410587.1 NC_022068_p18 minor tail protein phrog_346 minor tail protein tail 1 17400 19937
YP_008410606.1 NC_022068_p37 hypothetical protein phrog_1839 unknown function unknown function 1 30505 30597
YP_008410643.1 NC_022068_p74 hypothetical protein phrog_2451 unknown function unknown function 1 47956 48090
YP_008410600.1 NC_022068_p31 lysin B phrog_102 endolysin lysis 1 27519 28520
YP_008410601.1 NC_022068_p32 holin phrog_443 holin lysis 1 28536 28769
YP_008410665.1 NC_022068_p96 hypothetical protein phrog_1186 unknown function unknown function 1 54459 54860
YP_008410586.1 NC_022068_p17 minor tail protein phrog_732 minor tail protein tail 1 16573 17403
YP_008410670.1 NC_022068_p101 glycosyltransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 56922 57545
YP_008410634.1 NC_022068_p65 hypothetical protein phrog_2704 unknown function unknown function 1 43807 43956
YP_008410647.1 NC_022068_p78 hypothetical protein phrog_1943 unknown function unknown function 1 49582 49776
YP_008410633.1 NC_022068_p64 hypothetical protein phrog_6573 unknown function unknown function 1 43646 43810
YP_008410597.1 NC_022068_p28 hypothetical protein phrog_1172 unknown function unknown function 1 25889 26029
YP_008410623.1 NC_022068_p54 HTH DNA binding protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 38542 38907
YP_008410641.1 NC_022068_p72 hypothetical protein phrog_780 unknown function unknown function 1 47067 47294