| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_022068 |
Definition |
Mycobacteriophage Daenerys, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus. |
DB of origin |
REFSEQ |
Length |
58043 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
102 |
%GC |
61.55 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008410652.1 | NC_022068_p83 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | 1 | 51178 | 51345 |
| YP_008410596.1 | NC_022068_p27 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 25743 | 25892 |
| YP_008410620.1 | NC_022068_p51 | WhiB | phrog_1333 | unknown function | unknown function | 1 | 37294 | 37788 |
| YP_008410661.1 | NC_022068_p92 | transcriptional regulator | phrog_2474 | MerR-like transcriptional regulator | transcription regulation | 1 | 53725 | 53949 |
| YP_008410571.1 | NC_022068_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 571 | 2208 |
| YP_008410605.1 | NC_022068_p36 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 30222 | 30512 |
| YP_008410619.1 | NC_022068_p50 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 36947 | 37294 |
| YP_008410585.1 | NC_022068_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 14808 | 16517 |
| YP_008410666.1 | NC_022068_p97 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 54857 | 55099 |
| YP_008410668.1 | NC_022068_p99 | galactosyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 55280 | 56716 |
| YP_008410607.1 | NC_022068_p38 | hypothetical protein | phrog_2437 | unknown function | unknown function | -1 | 30769 | 30918 |
| YP_008410592.1 | NC_022068_p23 | hypothetical protein | phrog_2012 | minor tail protein | tail | 1 | 23629 | 24267 |
| YP_008410581.1 | NC_022068_p12 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8532 | 9468 |
| YP_008410608.1 | NC_022068_p39 | Xis | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 30970 | 31164 |
| YP_008410615.1 | NC_022068_p46 | hypothetical protein | phrog_2021 | unknown function | unknown function | 1 | 35343 | 35726 |
| YP_008410579.1 | NC_022068_p10 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 7095 | 7499 |
| YP_008410589.1 | NC_022068_p20 | hypothetical protein | phrog_2106 | minor tail protein | tail | 1 | 21820 | 22983 |
| YP_008410656.1 | NC_022068_p87 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 52061 | 52381 |
| YP_008410599.1 | NC_022068_p30 | lysin A | phrog_700 | endolysin | lysis | 1 | 26326 | 27519 |
| YP_008410614.1 | NC_022068_p45 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 35102 | 35299 |
| YP_008410575.1 | NC_022068_p6 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 5047 | 5868 |
| YP_008410582.1 | NC_022068_p13 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8532 | 9083 |
| YP_008410657.1 | NC_022068_p88 | hypothetical protein | phrog_4126 | unknown function | unknown function | 1 | 52378 | 52497 |
| YP_008410621.1 | NC_022068_p52 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 37785 | 38270 |
| YP_008410612.1 | NC_022068_p43 | CRO protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 34432 | 34665 |
| YP_008410593.1 | NC_022068_p24 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 24264 | 25088 |
| YP_008410610.1 | NC_022068_p41 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 32975 | 33430 |
| YP_008410628.1 | NC_022068_p59 | hypothetical protein | phrog_4657 | unknown function | unknown function | 1 | 40724 | 41332 |
| YP_008410594.1 | NC_022068_p25 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25094 | 25291 |
| YP_008410627.1 | NC_022068_p58 | hypothetical protein | phrog_1366 | unknown function | unknown function | 1 | 39750 | 40727 |
| YP_008410611.1 | NC_022068_p42 | immunity repressor | phrog_2838 | transcriptional repressor | transcription regulation | -1 | 33693 | 34265 |
| YP_008410618.1 | NC_022068_p49 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 36672 | 36950 |
| YP_008410595.1 | NC_022068_p26 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 25440 | 25736 |
| YP_008410624.1 | NC_022068_p55 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 38907 | 39059 |
| YP_008410630.1 | NC_022068_p61 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 41682 | 43196 |
| YP_008410609.1 | NC_022068_p40 | integrase | phrog_1 | integrase | integration and excision | 1 | 31596 | 32897 |
| YP_008410631.1 | NC_022068_p62 | hypothetical protein | phrog_7789 | unknown function | unknown function | 1 | 43272 | 43361 |
| YP_008410664.1 | NC_022068_p95 | hypothetical protein | phrog_3813 | unknown function | unknown function | 1 | 54271 | 54462 |
| YP_008410635.1 | NC_022068_p66 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 43953 | 44123 |
| YP_008410626.1 | NC_022068_p57 | hypothetical protein | phrog_5168 | unknown function | unknown function | 1 | 39289 | 39753 |
| YP_008410574.1 | NC_022068_p5 | scaffolding protein | phrog_2592 | head scaffolding protein | head and packaging | 1 | 4378 | 5028 |
| YP_008410580.1 | NC_022068_p11 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 7537 | 8418 |
| YP_008410602.1 | NC_022068_p33 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 28766 | 29140 |
| YP_008410644.1 | NC_022068_p75 | hypothetical protein | phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 48094 | 48945 |
| YP_008410570.1 | NC_022068_p1 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 108 | 563 |
| YP_008410642.1 | NC_022068_p73 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 47291 | 47959 |
| YP_008410649.1 | NC_022068_p80 | hypothetical protein | phrog_1546 | unknown function | unknown function | 1 | 49901 | 50629 |
| YP_008410651.1 | NC_022068_p82 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 50903 | 51181 |
| YP_008410590.1 | NC_022068_p21 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 22997 | 23338 |
| YP_008410662.1 | NC_022068_p93 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 53946 | 54110 |
| YP_008410658.1 | NC_022068_p89 | hypothetical protein | phrog_2278 | unknown function | unknown function | 1 | 52494 | 52730 |
| YP_008410578.1 | NC_022068_p9 | hypothetical protein | phrog_1929 | head-tail connector protein | connector | 1 | 6809 | 7105 |
| YP_008410660.1 | NC_022068_p91 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 52971 | 53615 |
| YP_008410637.1 | NC_022068_p68 | hypothetical protein | phrog_2259 | Rnase H | DNA, RNA and nucleotide metabolism | 1 | 44330 | 44902 |
| YP_008410617.1 | NC_022068_p48 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 35908 | 36597 |
| YP_008410622.1 | NC_022068_p53 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 38267 | 38545 |
| YP_008410604.1 | NC_022068_p35 | DnaQ-like protein | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29385 | 30206 |
| YP_008410573.1 | NC_022068_p4 | capsid maturation protease | phrog_1522 | head maturation protease | head and packaging | 1 | 3596 | 4351 |
| YP_008410572.1 | NC_022068_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2239 | 3609 |
| YP_008410636.1 | NC_022068_p67 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 44101 | 44256 |
| YP_008410588.1 | NC_022068_p19 | D-ala-D-ala-carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 19934 | 21823 |
| YP_008410625.1 | NC_022068_p56 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 39059 | 39292 |
| YP_008410576.1 | NC_022068_p7 | hypothetical protein | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 5880 | 6446 |
| YP_008410654.1 | NC_022068_p85 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 51607 | 51801 |
| YP_008410650.1 | NC_022068_p81 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 50626 | 50910 |
| YP_008410667.1 | NC_022068_p98 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 55092 | 55253 |
| YP_008410629.1 | NC_022068_p60 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41329 | 41685 |
| YP_008410659.1 | NC_022068_p90 | hypothetical protein | phrog_2247 | unknown function | unknown function | 1 | 52723 | 52974 |
| YP_008410598.1 | NC_022068_p29 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 26096 | 26329 |
| YP_008410577.1 | NC_022068_p8 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 6443 | 6772 |
| YP_008410616.1 | NC_022068_p47 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 35723 | 35911 |
| YP_008410645.1 | NC_022068_p76 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 48942 | 49205 |
| YP_008410648.1 | NC_022068_p79 | hypothetical protein | phrog_9840 | unknown function | unknown function | 1 | 49773 | 49904 |
| YP_008410671.1 | NC_022068_p102 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 57545 | 57871 |
| YP_008410669.1 | NC_022068_p100 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 56719 | 56925 |
| YP_008410655.1 | NC_022068_p86 | hypothetical protein | phrog_6625 | unknown function | unknown function | 1 | 51774 | 52064 |
| YP_008410639.1 | NC_022068_p70 | methylase | phrog_116 | DNA methyltransferase | other | 1 | 45291 | 46922 |
| YP_008410584.1 | NC_022068_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 13014 | 14723 |
| YP_008410632.1 | NC_022068_p63 | DNA methylase | phrog_3008 | DNA methyltransferase | other | 1 | 43336 | 43587 |
| YP_008410638.1 | NC_022068_p69 | hypothetical protein | phrog_6650 | unknown function | unknown function | 1 | 44899 | 45294 |
| YP_008410646.1 | NC_022068_p77 | hypothetical protein | phrog_6275 | unknown function | unknown function | 1 | 49202 | 49582 |
| YP_008410653.1 | NC_022068_p84 | hypothetical protein | phrog_2939 | unknown function | unknown function | 1 | 51398 | 51610 |
| YP_008410640.1 | NC_022068_p71 | hypothetical protein | phrog_2001 | unknown function | unknown function | 1 | 46948 | 47070 |
| YP_008410591.1 | NC_022068_p22 | hypothetical protein | phrog_2005 | minor tail protein | tail | 1 | 23361 | 23615 |
| YP_008410583.1 | NC_022068_p14 | tape measure protein | phrog_1942 | tail length tape measure protein | tail | 1 | 9486 | 13013 |
| YP_008410603.1 | NC_022068_p34 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 29165 | 29398 |
| YP_008410663.1 | NC_022068_p94 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 54116 | 54274 |
| YP_008410613.1 | NC_022068_p44 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 34725 | 35015 |
| YP_008410587.1 | NC_022068_p18 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 17400 | 19937 |
| YP_008410606.1 | NC_022068_p37 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 30505 | 30597 |
| YP_008410643.1 | NC_022068_p74 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 47956 | 48090 |
| YP_008410600.1 | NC_022068_p31 | lysin B | phrog_102 | endolysin | lysis | 1 | 27519 | 28520 |
| YP_008410601.1 | NC_022068_p32 | holin | phrog_443 | holin | lysis | 1 | 28536 | 28769 |
| YP_008410665.1 | NC_022068_p96 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 54459 | 54860 |
| YP_008410586.1 | NC_022068_p17 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 16573 | 17403 |
| YP_008410670.1 | NC_022068_p101 | glycosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 56922 | 57545 |
| YP_008410634.1 | NC_022068_p65 | hypothetical protein | phrog_2704 | unknown function | unknown function | 1 | 43807 | 43956 |
| YP_008410647.1 | NC_022068_p78 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 49582 | 49776 |
| YP_008410633.1 | NC_022068_p64 | hypothetical protein | phrog_6573 | unknown function | unknown function | 1 | 43646 | 43810 |
| YP_008410597.1 | NC_022068_p28 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 25889 | 26029 |
| YP_008410623.1 | NC_022068_p54 | HTH DNA binding protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 38542 | 38907 |
| YP_008410641.1 | NC_022068_p72 | hypothetical protein | phrog_780 | unknown function | unknown function | 1 | 47067 | 47294 |