Genomic map of Mycobacterium phage Jabbawokkie (NC_022069)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022069
Definition
Mycobacterium phage Jabbawokkie, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
DB of origin
REFSEQ
Length
55213
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
106
%GC
61.07
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008410749.1 NC_022069_p76 AAA ATPase phrog_1366 unknown function unknown function 1 43022 43903
YP_008410715.1 NC_022069_p43 hypothetical protein phrog_37040 unknown function unknown function 1 30519 30656
YP_008410767.1 NC_022069_p94 hypothetical protein phrog_1545 unknown function unknown function 1 49089 49226
YP_008410723.1 NC_022069_p51 hypothetical protein phrog_14625 unknown function unknown function -1 32145 32252
YP_008410686.1 NC_022069_p15 major tail subunit phrog_117 major tail protein tail 1 8202 8795
YP_008410771.1 NC_022069_p98 hypothetical protein phrog_908 unknown function unknown function 1 50067 50753
YP_008410737.1 NC_022069_p64 hypothetical protein phrog_3381 unknown function unknown function 1 38286 38462
YP_008410762.1 NC_022069_p89 hypothetical protein phrog_647 unknown function unknown function 1 47805 48089
YP_008410716.1 NC_022069_p44 hypothetical protein phrog_35991 unknown function unknown function 1 30678 30878
YP_008410744.1 NC_022069_p71 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 41755 42039
YP_008410705.1 NC_022069_p33 hypothetical protein phrog_13008 unknown function unknown function 1 26105 26245
YP_008410727.1 NC_022069_p54 hypothetical protein phrog_13315 unknown function unknown function -1 32813 33400
YP_008410739.1 NC_022069_p66 hypothetical protein phrog_3416 unknown function unknown function 1 39326 40015
YP_008410734.1 NC_022069_p61 Xis phrog_66 excisionase and transcriptional regulator integration and excision 1 37588 37785
YP_008410672.1 NC_022069_p1 HNH homing endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43 561
YP_008410673.1 NC_022069_p2 HNH homing endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 561 893
YP_008410733.1 NC_022069_p60 hypothetical protein phrog_21001 unknown function unknown function 1 37107 37502
YP_008410766.1 NC_022069_p93 hypothetical protein phrog_1091 unknown function unknown function 1 48910 49089
YP_008410755.1 NC_022069_p82 hypothetical protein phrog_3171 replication initiation protein DNA, RNA and nucleotide metabolism 1 45311 46270
YP_008410707.1 NC_022069_p35 hypothetical protein phrog_19498 unknown function unknown function 1 26428 26586
YP_008410678.1 NC_022069_p7 scaffolding protein phrog_3760 head scaffolding protein head and packaging 1 4830 5378
YP_008410736.1 NC_022069_p63 hypothetical protein phrog_1816 unknown function unknown function 1 38101 38289
YP_008410719.1 NC_022069_p47 hypothetical protein phrog_3693 unknown function unknown function -1 31344 31466
YP_008410752.1 NC_022069_p79 hypothetical protein phrog_2070 unknown function unknown function 1 44442 44627
YP_008410718.1 NC_022069_p46 hypothetical protein phrog_7480 unknown function unknown function -1 31141 31347
YP_008410765.1 NC_022069_p92 hypothetical protein phrog_6540 unknown function unknown function 1 48617 48913
YP_008410775.1 NC_022069_p102 hypothetical protein phrog_3813 unknown function unknown function 1 51864 52121
YP_008410773.1 NC_022069_p100 hypothetical protein phrog_1869 unknown function unknown function 1 51539 51703
YP_008410714.1 NC_022069_p42 hypothetical protein phrog_3798 unknown function unknown function 1 30179 30568
YP_008410699.1 NC_022069_p27 minor tail protein phrog_553 minor tail protein tail 1 23152 24099
YP_008410688.1 NC_022069_p17 tail assembly chaperone phrog_16781 tail assembly chaperone tail 1 8894 9505
YP_008410684.1 NC_022069_p13 hypothetical protein phrog_387 neck protein connector 1 7471 7743
YP_008410770.1 NC_022069_p97 hypothetical protein phrog_2247 unknown function unknown function 1 49801 50070
YP_008410740.1 NC_022069_p67 hypothetical protein phrog_1849 unknown function unknown function 1 40096 40395
YP_008410701.1 NC_022069_p29 HNH endonuclease domain phrog_20891 HNH endonuclease DNA, RNA and nucleotide metabolism 1 24667 25335
YP_008410692.1 NC_022069_p20 minor tail protein phrog_110 minor tail protein tail 1 14267 15931
YP_008410753.1 NC_022069_p80 hypothetical protein phrog_1311 unknown function unknown function 1 44605 44754
YP_008410704.1 NC_022069_p32 hypothetical protein phrog_932 unknown function unknown function 1 25962 26108
YP_008410748.1 NC_022069_p75 hypothetical protein phrog_2632 unknown function unknown function 1 42780 43025
YP_008410695.1 NC_022069_p23 minor tail protein phrog_17345 minor tail protein tail 1 16613 16921
YP_008410697.1 NC_022069_p25 minor tail protein phrog_346 minor tail protein tail 1 17616 20168
YP_008410677.1 NC_022069_p6 capsid maturation protease phrog_193 head maturation protease head and packaging 1 4109 4753
YP_008410769.1 NC_022069_p96 hypothetical protein phrog_20643 unknown function unknown function 1 49509 49808
YP_008410760.1 NC_022069_p87 hypothetical protein phrog_2591 unknown function unknown function 1 47258 47443
YP_008410675.1 NC_022069_p4 large subunit terminase phrog_2 terminase large subunit head and packaging 1 1187 2707
YP_008410776.1 NC_022069_p103 AlpA-like transcriptional regulator phrog_17545 unknown function unknown function -1 52118 52588
YP_008410779.1 NC_022069_p106 glycosyltransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 54498 55100
YP_008410778.1 NC_022069_p105 galactosyltransferase phrog_1721 galactosyl transferase moron, auxiliary metabolic gene and host takeover 1 53803 54501
YP_008410680.1 NC_022069_p9 hypothetical protein phrog_14967 unknown function unknown function 1 6348 6491
YP_008410679.1 NC_022069_p8 major capsid protein phrog_10 major head protein head and packaging 1 5401 6336
YP_008410742.1 NC_022069_p69 WhiB phrog_1333 unknown function unknown function 1 40782 41276
YP_008410674.1 NC_022069_p3 small subunit terminase phrog_4479 terminase small subunit head and packaging 1 961 1215
YP_008410676.1 NC_022069_p5 portal phrog_104 portal protein head and packaging 1 2704 4128
YP_008410709.1 NC_022069_p37 lysin A phrog_700 endolysin lysis 1 26902 28200
YP_008410764.1 NC_022069_p91 hypothetical protein phrog_1901 unknown function unknown function 1 48429 48620
YP_008410754.1 NC_022069_p81 GIY-YIG endonuclease phrog_3312 endonuclease DNA, RNA and nucleotide metabolism 1 44754 45311
YP_008410750.1 NC_022069_p77 hypothetical protein phrog_17733 unknown function unknown function 1 43900 44085
YP_008410685.1 NC_022069_p14 hypothetical protein phrog_123 tail terminator connector 1 7736 8140
YP_008410722.1 NC_022069_p50 hypothetical protein phrog_12593 unknown function unknown function -1 31918 32145
YP_008410687.1 NC_022069_p16 tail assembly chaperone phrog_21995 tail assembly chaperone tail 1 8894 9795
YP_008410738.1 NC_022069_p65 hypothetical protein phrog_1797 unknown function unknown function 1 38459 39289
YP_008410696.1 NC_022069_p24 minor tail protein phrog_18521 minor tail protein tail 1 16918 17619
YP_008410706.1 NC_022069_p34 hypothetical protein phrog_1172 unknown function unknown function 1 26242 26379
YP_008410710.1 NC_022069_p38 lysin B phrog_102 endolysin lysis 1 28197 29270
YP_008410761.1 NC_022069_p88 hypothetical protein phrog_722 unknown function unknown function 1 47440 47808
YP_008410691.1 NC_022069_p19 minor tail protein phrog_106 minor tail protein tail 1 13336 14265
YP_008410729.1 NC_022069_p56 hypothetical protein phrog_7613 unknown function unknown function -1 35045 35191
YP_008410708.1 NC_022069_p36 hypothetical protein phrog_3888 unknown function unknown function 1 26591 26905
YP_008410743.1 NC_022069_p70 hypothetical protein phrog_2096 unknown function unknown function 1 41273 41758
YP_008410777.1 NC_022069_p104 glycosyltransferase/methyl transferase phrog_8858 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 52640 53806
YP_008410731.1 NC_022069_p58 CRO protein phrog_3642 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 35920 36165
YP_008410700.1 NC_022069_p28 hypothetical protein phrog_644 unknown function unknown function 1 24166 24603
YP_008410698.1 NC_022069_p26 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 20165 23155
YP_008410728.1 NC_022069_p55 integrase phrog_1 integrase integration and excision 1 33700 34929
YP_008410758.1 NC_022069_p85 hypothetical protein phrog_1943 unknown function unknown function 1 46718 46912
YP_008410757.1 NC_022069_p84 hypothetical protein phrog_7196 unknown function unknown function 1 46530 46721
YP_008410694.1 NC_022069_p22 minor tail protein phrog_17043 minor tail protein tail 1 16293 16616
YP_008410746.1 NC_022069_p73 hypothetical protein phrog_2078 unknown function unknown function 1 42401 42556
YP_008410724.1 NC_022069_p52 hypothetical protein phrog_5497 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 32249 32443
YP_008410730.1 NC_022069_p57 immunity repressor phrog_3949 transcriptional repressor transcription regulation -1 35194 35688
YP_008410693.1 NC_022069_p21 minor tail protein phrog_8122 minor tail protein tail 1 15931 16296
YP_008410717.1 NC_022069_p45 hypothetical protein phrog_10622 unknown function unknown function -1 31002 31148
YP_008410703.1 NC_022069_p31 hypothetical protein phrog_411 unknown function unknown function 1 25659 25955
YP_008410759.1 NC_022069_p86 hypothetical protein phrog_1546 unknown function unknown function 1 46909 47265
YP_008410683.1 NC_022069_p12 hypothetical protein phrog_16796 unknown function unknown function 1 7311 7487
YP_008410681.1 NC_022069_p10 hypothetical protein phrog_1290 head-tail adaptor connector 1 6509 6964
YP_008410712.1 NC_022069_p40 hypothetical protein phrog_4511 unknown function unknown function 1 29644 29943
YP_008410735.1 NC_022069_p62 hypothetical protein phrog_9588 unknown function unknown function 1 37835 38104
YP_008410726.1 NC_022069_p53 hypothetical protein singleton unknown function unknown function -1 32436 32570
YP_008410768.1 NC_022069_p95 hypothetical protein phrog_5186 unknown function unknown function 1 49223 49396
YP_008410682.1 NC_022069_p11 hypothetical protein phrog_763 head-tail adaptor connector 1 6961 7314
YP_008410690.1 NC_022069_p18 tapemeasure phrog_971 endolysin lysis 1 9788 13339
YP_008410774.1 NC_022069_p101 hypothetical protein phrog_1694 unknown function unknown function 1 51709 51867
YP_008410747.1 NC_022069_p74 hypothetical protein phrog_1834 unknown function unknown function 1 42553 42783
YP_008410711.1 NC_022069_p39 holin phrog_443 holin lysis 1 29390 29647
YP_008410702.1 NC_022069_p30 DNA binding protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25336 25518
YP_008410732.1 NC_022069_p59 hypothetical protein phrog_130 anti-repressor Ant transcription regulation 1 36226 37107
YP_008410741.1 NC_022069_p68 hypothetical protein phrog_658 unknown function unknown function 1 40392 40781
YP_008410751.1 NC_022069_p78 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44082 44423
YP_008410721.1 NC_022069_p49 hypothetical protein phrog_5648 unknown function unknown function -1 31633 31869
YP_008410756.1 NC_022069_p83 hypothetical protein phrog_2080 unknown function unknown function 1 46270 46533
YP_008410713.1 NC_022069_p41 hypothetical protein phrog_6071 unknown function unknown function 1 29943 30179
YP_008410745.1 NC_022069_p72 hypothetical protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 42036 42401
YP_008410720.1 NC_022069_p48 hypothetical protein phrog_2437 unknown function unknown function -1 31466 31633
YP_008410772.1 NC_022069_p99 hypothetical protein phrog_8604 unknown function unknown function 1 50750 51352
YP_008410763.1 NC_022069_p90 hypothetical protein singleton unknown function unknown function 1 48082 48432