| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_022070 |
Definition |
Mycobacteriophage Wheeler, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
REFSEQ |
Length |
53588 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
96 |
%GC |
63.31 |
Number of singletons |
2 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008410805.1 | NC_022070_p26 | minor tail protein | phrog_1543 | minor tail protein | tail | 1 | 21232 | 21414 |
| YP_008410788.1 | NC_022070_p9 | lysin A | phrog_317 | endolysin | lysis | 1 | 4616 | 6049 |
| YP_008410865.1 | NC_022070_p86 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 49843 | 50031 |
| YP_008410819.1 | NC_022070_p40 | hypothetical protein | phrog_2387 | nucleotide kinase | other | -1 | 31741 | 32130 |
| YP_008410834.1 | NC_022070_p55 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38468 | 38989 |
| YP_008410868.1 | NC_022070_p89 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 50344 | 50496 |
| YP_008410867.1 | NC_022070_p88 | hypothetical protein | phrog_2093 | unknown function | unknown function | -1 | 50195 | 50347 |
| YP_008410832.1 | NC_022070_p53 | hypothetical protein | phrog_1503 | unknown function | unknown function | -1 | 37897 | 38076 |
| YP_008410851.1 | NC_022070_p72 | hypothetical protein | phrog_16650 | unknown function | unknown function | -1 | 44525 | 44734 |
| YP_008410853.1 | NC_022070_p74 | hypothetical protein | phrog_1035 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 45562 | 46185 |
| YP_008410844.1 | NC_022070_p65 | hypothetical protein | phrog_5742 | unknown function | unknown function | -1 | 41826 | 41924 |
| YP_008410860.1 | NC_022070_p81 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 48769 | 49068 |
| YP_008410872.1 | NC_022070_p93 | hypothetical protein | phrog_4958 | unknown function | unknown function | -1 | 52127 | 52417 |
| YP_008410849.1 | NC_022070_p70 | hypothetical protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 43468 | 43656 |
| YP_008410812.1 | NC_022070_p33 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 27827 | 28150 |
| YP_008410783.1 | NC_022070_p4 | hypothetical protein | phrog_2830 | unknown function | unknown function | 1 | 1712 | 2023 |
| YP_008410852.1 | NC_022070_p73 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 44765 | 45583 |
| YP_008410831.1 | NC_022070_p52 | phosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 37133 | 37900 |
| YP_008410811.1 | NC_022070_p32 | D-Ala-D-Ala carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 26259 | 27737 |
| YP_008410782.1 | NC_022070_p3 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 1164 | 1598 |
| YP_008410814.1 | NC_022070_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28348 | 28803 |
| YP_008410870.1 | NC_022070_p91 | hypothetical protein | phrog_2985 | unknown function | unknown function | -1 | 51108 | 51263 |
| YP_008410861.1 | NC_022070_p82 | hypothetical protein | phrog_21527 | unknown function | unknown function | -1 | 49094 | 49249 |
| YP_008410821.1 | NC_022070_p42 | hypothetical protein | phrog_1860 | unknown function | unknown function | -1 | 32294 | 32440 |
| YP_008410856.1 | NC_022070_p77 | hypothetical protein | phrog_3851 | unknown function | unknown function | -1 | 46679 | 46969 |
| YP_008410829.1 | NC_022070_p50 | hypothetical protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 36204 | 36995 |
| YP_008410785.1 | NC_022070_p6 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 3376 | 4077 |
| YP_008410855.1 | NC_022070_p76 | hypothetical protein | phrog_1584 | unknown function | unknown function | -1 | 46341 | 46658 |
| YP_008410840.1 | NC_022070_p61 | hypothetical protein | phrog_20071 | unknown function | unknown function | -1 | 40167 | 40349 |
| YP_008410848.1 | NC_022070_p69 | hypothetical protein | phrog_2184 | unknown function | unknown function | -1 | 43154 | 43471 |
| YP_008410866.1 | NC_022070_p87 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 50031 | 50198 |
| YP_008410780.1 | NC_022070_p1 | hypothetical protein | phrog_13643 | helicase | DNA, RNA and nucleotide metabolism | 1 | 570 | 836 |
| YP_008410845.1 | NC_022070_p66 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 41925 | 42734 |
| YP_008410792.1 | NC_022070_p13 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 10151 | 11032 |
| YP_008410787.1 | NC_022070_p8 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 4359 | 4616 |
| YP_008410869.1 | NC_022070_p90 | hypothetical protein | phrog_7647 | unknown function | unknown function | -1 | 50493 | 50720 |
| YP_008410809.1 | NC_022070_p30 | minor tail protein | phrog_1397 | unknown function | unknown function | 1 | 24041 | 24388 |
| YP_008410813.1 | NC_022070_p34 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 28160 | 28351 |
| YP_008410784.1 | NC_022070_p5 | hypothetical protein | phrog_1197 | tail protein | tail | 1 | 2287 | 3357 |
| YP_008410822.1 | NC_022070_p43 | hypothetical protein | phrog_1971 | unknown function | unknown function | -1 | 32386 | 32673 |
| YP_008410790.1 | NC_022070_p11 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 7027 | 8715 |
| YP_008410854.1 | NC_022070_p75 | hypothetical protein | phrog_1311 | unknown function | unknown function | -1 | 46178 | 46327 |
| YP_008410789.1 | NC_022070_p10 | lysin B | phrog_102 | endolysin | lysis | 1 | 6039 | 7007 |
| YP_008410873.1 | NC_022070_p94 | hypothetical protein | phrog_2212 | unknown function | unknown function | -1 | 52454 | 52531 |
| YP_008410825.1 | NC_022070_p46 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 34910 | 35140 |
| YP_008410802.1 | NC_022070_p23 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15865 | 16242 |
| YP_008410839.1 | NC_022070_p60 | hypothetical protein | singleton | unknown function | unknown function | -1 | 40084 | 40218 |
| YP_008410794.1 | NC_022070_p15 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 11614 | 12630 |
| YP_008410858.1 | NC_022070_p79 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 47403 | 47915 |
| YP_008410827.1 | NC_022070_p48 | hypothetical protein | phrog_2094 | unknown function | unknown function | -1 | 35697 | 36029 |
| YP_008410808.1 | NC_022070_p29 | minor tail protein | phrog_981 | minor tail protein | tail | 1 | 23697 | 24044 |
| YP_008410823.1 | NC_022070_p44 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 32670 | 33050 |
| YP_008410816.1 | NC_022070_p37 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 29414 | 29698 |
| YP_008410803.1 | NC_022070_p24 | tape meaure protein | phrog_305 | tail length tape measure protein | tail | 1 | 16677 | 19154 |
| YP_008410806.1 | NC_022070_p27 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 21414 | 23216 |
| YP_008410804.1 | NC_022070_p25 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 19178 | 21235 |
| YP_008410828.1 | NC_022070_p49 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 36022 | 36207 |
| YP_008410800.1 | NC_022070_p21 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 14892 | 15743 |
| YP_008410815.1 | NC_022070_p36 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 28533 | 29294 |
| YP_008410874.1 | NC_022070_p95 | hypothetical protein | phrog_5419 | unknown function | unknown function | -1 | 52624 | 52965 |
| YP_008410817.1 | NC_022070_p38 | integrase (S-int) | phrog_95 | integrase | integration and excision | 1 | 29849 | 31351 |
| YP_008410830.1 | NC_022070_p51 | hypothetical protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 36988 | 37128 |
| YP_008410820.1 | NC_022070_p41 | hypothetical protein | phrog_2035 | unknown function | unknown function | -1 | 32127 | 32297 |
| YP_008410837.1 | NC_022070_p58 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 39490 | 39624 |
| YP_008410796.1 | NC_022070_p17 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 13227 | 13676 |
| YP_008410864.1 | NC_022070_p85 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 49721 | 49846 |
| YP_008410847.1 | NC_022070_p68 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 42864 | 43157 |
| YP_008410857.1 | NC_022070_p78 | hypothetical protein | phrog_1809 | unknown function | unknown function | -1 | 46966 | 47361 |
| YP_008410875.1 | NC_022070_p96 | hypothetical protein | phrog_828 | unknown function | unknown function | -1 | 53015 | 53218 |
| YP_008410838.1 | NC_022070_p59 | Endo VII protein | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39621 | 40097 |
| YP_008410863.1 | NC_022070_p84 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 49521 | 49724 |
| YP_008410797.1 | NC_022070_p18 | hypothetical protein | phrog_320 | head closure Hc1 | connector | 1 | 13676 | 14038 |
| YP_008410791.1 | NC_022070_p12 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 8712 | 10154 |
| YP_008410824.1 | NC_022070_p45 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 33047 | 34873 |
| YP_008410826.1 | NC_022070_p47 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 35171 | 35662 |
| YP_008410818.1 | NC_022070_p39 | hypothetical protein | phrog_1966 | unknown function | unknown function | -1 | 31472 | 31744 |
| YP_008410807.1 | NC_022070_p28 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 23254 | 23700 |
| YP_008410836.1 | NC_022070_p57 | hypothetical protein | phrog_1783 | unknown function | unknown function | -1 | 39329 | 39493 |
| YP_008410798.1 | NC_022070_p19 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 14038 | 14433 |
| YP_008410841.1 | NC_022070_p62 | DNA methylase | phrog_24333 | DNA methyltransferase | other | -1 | 40346 | 41164 |
| YP_008410801.1 | NC_022070_p22 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15865 | 16664 |
| YP_008410862.1 | NC_022070_p83 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 49246 | 49524 |
| YP_008410833.1 | NC_022070_p54 | hypothetical protein | phrog_474 | phosphofructokinase | other | -1 | 38073 | 38471 |
| YP_008410810.1 | NC_022070_p31 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 24413 | 26266 |
| YP_008410850.1 | NC_022070_p71 | DNA methylase | phrog_67 | DNA methyltransferase | other | -1 | 43659 | 44519 |
| YP_008410842.1 | NC_022070_p63 | hypothetical protein | phrog_647 | unknown function | unknown function | -1 | 41161 | 41547 |
| YP_008410781.1 | NC_022070_p2 | hypothetical protein | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 833 | 1129 |
| YP_008410843.1 | NC_022070_p64 | NrdH | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 41544 | 41819 |
| YP_008410799.1 | NC_022070_p20 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 14437 | 14883 |
| YP_008410786.1 | NC_022070_p7 | hypothetical protein | phrog_1718 | tail protein | tail | 1 | 4091 | 4351 |
| YP_008410793.1 | NC_022070_p14 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 11091 | 11603 |
| YP_008410859.1 | NC_022070_p80 | HNH endonuclease | phrog_1035 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 48179 | 48775 |
| YP_008410871.1 | NC_022070_p92 | DNA methylase | phrog_363 | DNA methyltransferase | other | -1 | 51451 | 52122 |
| YP_008410846.1 | NC_022070_p67 | hypothetical protein | phrog_1705 | unknown function | unknown function | -1 | 42721 | 42867 |
| YP_008410795.1 | NC_022070_p16 | hypothetical protein | phrog_1857 | head-tail connector protein | connector | 1 | 12709 | 13227 |
| YP_008410835.1 | NC_022070_p56 | DNA polymerase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38835 | 39350 |