Genomic map of Mycobacterium phage Crossroads (NC_022071)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022071
Definition
Mycobacterium phage Crossroads, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bronvirus; unclassified Bronvirus.
DB of origin
REFSEQ
Length
76129
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
133
%GC
58.94
Number of singletons
1
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008410913.1 NC_022071_p38 integrase phrog_1 integrase integration and excision 1 31657 32964
YP_008410877.1 NC_022071_p2 hypothetical protein phrog_1496 terminase small subunit head and packaging 1 477 866
YP_008410957.1 NC_022071_p82 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 54290 54694
YP_008410958.1 NC_022071_p83 hypothetical protein phrog_1941 unknown function unknown function 1 54684 54914
YP_008410895.1 NC_022071_p20 hypothetical protein phrog_2689 minor tail protein tail 1 19228 21024
YP_008410959.1 NC_022071_p84 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 54993 55559
YP_008410987.1 NC_022071_p112 hypothetical protein phrog_6170 unknown function unknown function 1 65741 66091
YP_008410945.1 NC_022071_p70 DnaC helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 47655 48920
YP_008410933.1 NC_022071_p58 hypothetical protein phrog_5872 unknown function unknown function 1 42846 43163
YP_008410967.1 NC_022071_p92 hypothetical protein phrog_7890 unknown function unknown function 1 58802 58912
YP_008411003.1 NC_022071_p128 hypothetical protein phrog_1909 unknown function unknown function -1 71943 72797
YP_008410975.1 NC_022071_p100 hypothetical protein phrog_6821 unknown function unknown function 1 61654 61842
YP_008411005.1 NC_022071_p130 hypothetical protein phrog_12614 unknown function unknown function -1 74618 74743
YP_008410925.1 NC_022071_p50 hypothetical protein phrog_7316 unknown function unknown function 1 38151 38396
YP_008411000.1 NC_022071_p125 hypothetical protein phrog_8547 unknown function unknown function -1 70354 70488
YP_008410969.1 NC_022071_p94 hypothetical protein phrog_1969 unknown function unknown function 1 59141 59479
YP_008410965.1 NC_022071_p90 ClpP phrog_94 head maturation protease head and packaging 1 57736 58407
YP_008410983.1 NC_022071_p108 hypothetical protein phrog_2293 unknown function unknown function 1 63279 63491
YP_008410932.1 NC_022071_p57 hypothetical protein phrog_301 secreted protein other 1 42521 42856
YP_008410881.1 NC_022071_p6 hypothetical protein phrog_193 head maturation protease head and packaging 1 4311 5369
YP_008410893.1 NC_022071_p18 minor tail subunit phrog_110 minor tail protein tail 1 16989 18722
YP_008410938.1 NC_022071_p63 hypothetical protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 44802 45557
YP_008410880.1 NC_022071_p5 portal protein phrog_104 portal protein head and packaging 1 2638 4293
YP_008411006.1 NC_022071_p131 hypothetical protein phrog_14714 unknown function unknown function -1 74748 74903
YP_008410940.1 NC_022071_p65 hypothetical protein phrog_7527 unknown function unknown function 1 45754 46038
YP_008410981.1 NC_022071_p106 hypothetical protein phrog_37290 unknown function unknown function 1 62798 62998
YP_008410929.1 NC_022071_p54 hypothetical protein phrog_2380 unknown function unknown function 1 40235 40474
YP_008410962.1 NC_022071_p87 hypothetical protein phrog_14246 unknown function unknown function 1 56201 56281
YP_008410912.1 NC_022071_p37 hypothetical protein phrog_10128 unknown function unknown function -1 30753 31121
YP_008410918.1 NC_022071_p43 hypothetical protein phrog_762 unknown function unknown function 1 34908 35270
YP_008410935.1 NC_022071_p60 hypothetical protein phrog_7425 unknown function unknown function 1 43329 43532
YP_008410899.1 NC_022071_p24 hypothetical protein phrog_9784 minor tail protein tail 1 21937 24225
YP_008410902.1 NC_022071_p27 LysA phrog_1512 endolysin lysis 1 25353 26303
YP_008410943.1 NC_022071_p68 hypothetical protein phrog_542 unknown function unknown function 1 46802 46981
YP_008410995.1 NC_022071_p120 hypothetical protein phrog_1909 unknown function unknown function -1 68249 69100
YP_008410927.1 NC_022071_p52 hypothetical protein phrog_200 lipoprotein other 1 38649 39641
YP_008410892.1 NC_022071_p17 minor tail subunit phrog_106 minor tail protein tail 1 16074 16988
YP_008410888.1 NC_022071_p13 major tail subunit phrog_476 major tail protein tail 1 9002 9901
YP_008410897.1 NC_022071_p22 hypothetical protein phrog_4137 unknown function unknown function 1 21190 21465
YP_008410990.1 NC_022071_p115 hypothetical protein phrog_4776 unknown function unknown function -1 66801 67517
YP_008410908.1 NC_022071_p33 hypothetical protein phrog_6558 unknown function unknown function -1 28758 29102
YP_008411002.1 NC_022071_p127 hypothetical protein phrog_6176 unknown function unknown function 1 70753 71235
YP_008410894.1 NC_022071_p19 hypothetical protein phrog_4413 minor tail protein tail 1 18747 19244
YP_008410876.1 NC_022071_p1 hypothetical protein phrog_7082 unknown function unknown function 1 91 468
YP_008410952.1 NC_022071_p77 hypothetical protein phrog_14542 unknown function unknown function 1 52936 53067
YP_008410878.1 NC_022071_p3 hypothetical protein phrog_6976 unknown function unknown function 1 866 1069
YP_008410879.1 NC_022071_p4 terminase phrog_9 terminase large subunit head and packaging 1 1069 2637
YP_008410923.1 NC_022071_p48 hypothetical protein phrog_9705 unknown function unknown function 1 37621 37956
YP_008410942.1 NC_022071_p67 hypothetical protein phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 46441 46839
YP_008410905.1 NC_022071_p30 hypothetical protein phrog_5807 unknown function unknown function 1 27752 28006
YP_008410937.1 NC_022071_p62 hypothetical protein phrog_1123 unknown function unknown function 1 44487 44801
YP_008410886.1 NC_022071_p11 hypothetical protein phrog_5775 head-tail connector protein connector 1 8030 8461
YP_008410999.1 NC_022071_p124 hypothetical protein phrog_6004 unknown function unknown function -1 70087 70350
YP_008410970.1 NC_022071_p95 HNH endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 59527 59940
YP_008410922.1 NC_022071_p47 hypothetical protein phrog_1649 metallo-phosphoesterase other 1 36606 37640
YP_008410926.1 NC_022071_p51 hypothetical protein phrog_9674 unknown function unknown function 1 38433 38561
YP_008410898.1 NC_022071_p23 hypothetical protein phrog_240 head protein head and packaging 1 21550 21936
YP_008410976.1 NC_022071_p101 hypothetical protein phrog_2057 unknown function unknown function 1 61823 61993
YP_008410916.1 NC_022071_p41 hypothetical protein phrog_1702 transcriptional repressor transcription regulation 1 34469 34699
YP_008410883.1 NC_022071_p8 Capsid phrog_283 major head protein head and packaging 1 6070 7218
YP_008410934.1 NC_022071_p59 hypothetical protein phrog_5858 unknown function unknown function 1 43160 43336
YP_008410914.1 NC_022071_p39 hypothetical protein phrog_950 unknown function unknown function -1 32961 33740
YP_008411007.1 NC_022071_p132 hypothetical protein phrog_7398 unknown function unknown function -1 74903 75286
YP_008410980.1 NC_022071_p105 hypothetical protein phrog_32654 unknown function unknown function 1 62692 62826
YP_008410896.1 NC_022071_p21 hypothetical protein phrog_9672 minor tail protein tail 1 21030 21200
YP_008410924.1 NC_022071_p49 hypothetical protein phrog_6017 unknown function unknown function 1 37943 38260
YP_008410954.1 NC_022071_p79 hypothetical protein phrog_6064 unknown function unknown function 1 53290 53475
YP_008410968.1 NC_022071_p93 hypothetical protein phrog_2218 unknown function unknown function 1 58909 59148
YP_008410906.1 NC_022071_p31 hypothetical protein phrog_726 unknown function unknown function 1 28009 28431
YP_008410941.1 NC_022071_p66 hypothetical protein phrog_1389 unknown function unknown function 1 46035 46394
YP_008410939.1 NC_022071_p64 hypothetical protein phrog_5917 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 45557 45757
YP_008410973.1 NC_022071_p98 DnaQ-like protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 60692 61474
YP_008410909.1 NC_022071_p34 hypothetical protein phrog_9776 unknown function unknown function -1 29108 29395
YP_008410985.1 NC_022071_p110 hypothetical protein phrog_4234 HNH endonuclease DNA, RNA and nucleotide metabolism 1 63942 64328
YP_008410928.1 NC_022071_p53 hypothetical protein phrog_4870 unknown function unknown function 1 39815 40234
YP_008410956.1 NC_022071_p81 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 54053 54289
YP_008410997.1 NC_022071_p122 hypothetical protein phrog_6224 unknown function unknown function -1 69607 69840
YP_008410972.1 NC_022071_p97 hypothetical protein phrog_4472 nucleotide kinase other 1 60279 60695
YP_008410992.1 NC_022071_p117 hypothetical protein phrog_15796 unknown function unknown function -1 67733 67891
YP_008410901.1 NC_022071_p26 hypothetical protein phrog_3856 minor tail protein tail 1 24407 25348
YP_008411008.1 NC_022071_p133 hypothetical protein phrog_15448 unknown function unknown function -1 75380 75505
YP_008410903.1 NC_022071_p28 LysB phrog_102 endolysin lysis 1 26303 27274
YP_008410955.1 NC_022071_p80 RusA phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 53632 54045
YP_008410977.1 NC_022071_p102 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 61956 62378
YP_008410947.1 NC_022071_p72 hypothetical protein phrog_6624 unknown function unknown function 1 49270 49458
YP_008410921.1 NC_022071_p46 hypothetical protein phrog_5916 unknown function unknown function 1 36248 36613
YP_008410966.1 NC_022071_p91 hypothetical protein phrog_7495 unknown function unknown function 1 58407 58802
YP_008410979.1 NC_022071_p104 hypothetical protein phrog_6027 unknown function unknown function 1 62589 62708
YP_008410974.1 NC_022071_p99 hypothetical protein phrog_397 unknown function unknown function 1 61475 61657
YP_008410904.1 NC_022071_p29 hypothetical protein phrog_5963 holin lysis 1 27282 27752
YP_008410890.1 NC_022071_p15 tail assembly chaperone phrog_4464 tail assembly chaperone tail 1 9991 10290
YP_008410931.1 NC_022071_p56 hypothetical protein phrog_4670 unknown function unknown function 1 42397 42528
YP_008410891.1 NC_022071_p16 tape measure protein phrog_3547 tail length tape measure protein tail 1 10856 15985
YP_008410993.1 NC_022071_p118 hypothetical protein phrog_6739 unknown function unknown function -1 67884 67982
YP_008410991.1 NC_022071_p116 hypothetical protein phrog_18991 unknown function unknown function -1 67514 67702
YP_008410885.1 NC_022071_p10 hypothetical protein phrog_5309 head-tail adaptor connector 1 7692 8030
YP_008410911.1 NC_022071_p36 Lsr2 phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 30215 30676
YP_008410964.1 NC_022071_p89 hypothetical protein phrog_3641 unknown function unknown function 1 57560 57739
YP_008411001.1 NC_022071_p126 hypothetical protein phrog_6968 unknown function unknown function -1 70490 70705
YP_008410920.1 NC_022071_p45 hypothetical protein phrog_572 unknown function unknown function 1 35358 35774
YP_008410950.1 NC_022071_p75 NAPRTase phrog_448 nicotinamide phosphoribosyl transferase other 1 50439 51923
YP_008410961.1 NC_022071_p86 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 55995 56213
YP_008410946.1 NC_022071_p71 hypothetical protein phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 48917 49171
YP_008410982.1 NC_022071_p107 hypothetical protein phrog_6800 unknown function unknown function 1 62982 63164
YP_008410963.1 NC_022071_p88 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 56278 57576
YP_008410910.1 NC_022071_p35 NrdC-like protein phrog_388 nucleotidyltransferase DNA, RNA and nucleotide metabolism -1 29380 30126
YP_008410948.1 NC_022071_p73 hypothetical protein phrog_6206 unknown function unknown function 1 49448 49594
YP_008410884.1 NC_022071_p9 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 7231 7695
YP_008410971.1 NC_022071_p96 hypothetical protein phrog_1042 unknown function unknown function 1 60044 60304
YP_008410882.1 NC_022071_p7 scaffolding protein phrog_3760 head scaffolding protein head and packaging 1 5422 6027
YP_008410951.1 NC_022071_p76 PNK protein phrog_505 polynucleotide kinase other 1 52010 52936
YP_008410986.1 NC_022071_p111 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 65043 65732
YP_008410960.1 NC_022071_p85 ssDNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 55546 55932
YP_008410953.1 NC_022071_p78 hypothetical protein phrog_7155 unknown function unknown function 1 53051 53293
YP_008410889.1 NC_022071_p14 tail assembly chaperone phrog_2624 tail assembly chaperone tail 1 9991 10814
YP_008410900.1 NC_022071_p25 hypothetical protein phrog_9833 unknown function unknown function 1 24257 24406
YP_008410988.1 NC_022071_p113 hypothetical protein phrog_10010 unknown function unknown function -1 66135 66290
YP_008410887.1 NC_022071_p12 hypothetical protein phrog_123 tail terminator connector 1 8477 8974
YP_008410919.1 NC_022071_p44 hypothetical protein phrog_8707 unknown function unknown function 1 35251 35361
YP_008410936.1 NC_022071_p61 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 43574 44506
YP_008411004.1 NC_022071_p129 AAA ATPase phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover -1 73007 74248
YP_008410915.1 NC_022071_p40 hypothetical protein phrog_1746 transcriptional repressor transcription regulation -1 33893 34282
YP_008410944.1 NC_022071_p69 hypothetical protein phrog_1882 unknown function unknown function 1 46978 47658
YP_008410989.1 NC_022071_p114 hypothetical protein phrog_2869 unknown function unknown function -1 66508 66699
YP_008410907.1 NC_022071_p32 NrdH-like protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 28422 28688
YP_008410994.1 NC_022071_p119 hypothetical protein phrog_6230 unknown function unknown function -1 67975 68238
YP_008410984.1 NC_022071_p109 hypothetical protein phrog_10206 unknown function unknown function 1 63473 63643
YP_008410996.1 NC_022071_p121 hypothetical protein phrog_3777 unknown function unknown function -1 69199 69594
YP_008410978.1 NC_022071_p103 hypothetical protein phrog_3699 unknown function unknown function 1 62378 62596
YP_008410917.1 NC_022071_p42 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 34696 34911
YP_008410930.1 NC_022071_p55 Von Willebrand-like domain protein phrog_850 RNA-binding protein DNA, RNA and nucleotide metabolism 1 40590 42020
YP_008410998.1 NC_022071_p123 hypothetical protein singleton unknown function unknown function -1 69806 69955
YP_008410949.1 NC_022071_p74 phosphoribosyl-pyrophosphate synthetase phrog_619 ribose-phosphate pyrophosphokinase other 1 49579 50442