Genomic map of Mycobacterium phage Sarfire (NC_022324)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022324
Definition
Mycobacterium phage Sarfire, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
REFSEQ
Length
53701
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
99
%GC
63.81
Number of singletons
3
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008530550.1 NC_022324_p85 hypothetical protein phrog_1155 unknown function unknown function -1 49744 49932
YP_008530482.1 NC_022324_p17 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 13033 13482
YP_008530541.1 NC_022324_p76 hypothetical protein phrog_17362 unknown function unknown function -1 46860 47087
YP_008530561.1 NC_022324_p96 hypothetical protein singleton unknown function unknown function -1 52719 52874
YP_008530528.1 NC_022324_p63 hypothetical protein phrog_2507 unknown function unknown function -1 41985 42158
YP_008530491.1 NC_022324_p26 hypothetical protein phrog_1543 minor tail protein tail 1 21039 21221
YP_008530552.1 NC_022324_p87 hypothetical protein phrog_2093 unknown function unknown function -1 50096 50248
YP_008530501.1 NC_022324_p36 hypothetical protein phrog_411 unknown function unknown function 1 29220 29516
YP_008530536.1 NC_022324_p71 hypothetical protein phrog_8167 unknown function unknown function -1 44636 44971
YP_008530551.1 NC_022324_p86 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 49932 50099
YP_008530563.1 NC_022324_p98 hypothetical protein phrog_828 unknown function unknown function -1 53099 53353
YP_008530523.1 NC_022324_p58 hypothetical protein phrog_722 unknown function unknown function -1 39627 40256
YP_008530507.1 NC_022324_p42 hypothetical protein phrog_383 unknown function unknown function -1 32235 32615
YP_008530470.1 NC_022324_p5 hypothetical protein phrog_1197 tail protein tail 1 2102 3172
YP_008530486.1 NC_022324_p21 major tail subunit phrog_117 major tail protein tail 1 14698 15546
YP_008530476.1 NC_022324_p11 terminase phrog_9 terminase large subunit head and packaging 1 6833 8521
YP_008530540.1 NC_022324_p75 hypothetical protein phrog_5947 unknown function unknown function -1 46715 46867
YP_008530544.1 NC_022324_p79 repressor phrog_357 transcriptional repressor transcription regulation -1 47823 48509
YP_008530562.1 NC_022324_p97 hypothetical protein phrog_2212 unknown function unknown function -1 52906 52989
YP_008530518.1 NC_022324_p53 hypothetical protein phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38181 38723
YP_008530515.1 NC_022324_p50 hypothetical protein phrog_1503 unknown function unknown function -1 37096 37281
YP_008530534.1 NC_022324_p69 RecB phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43231 43965
YP_008530475.1 NC_022324_p10 LysB phrog_102 endolysin lysis 1 5845 6813
YP_008530481.1 NC_022324_p16 hypothetical protein phrog_1857 head-tail connector protein connector 1 12515 13033
YP_008530519.1 NC_022324_p54 hypothetical protein phrog_1783 unknown function unknown function -1 38702 38851
YP_008530500.1 NC_022324_p35 hypothetical protein phrog_754 minor tail protein tail 1 28155 29099
YP_008530535.1 NC_022324_p70 HNH domain protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 43985 44563
YP_008530526.1 NC_022324_p61 NrdH phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 40898 41167
YP_008530490.1 NC_022324_p25 minor tail protein phrog_106 minor tail protein tail 1 18963 21020
YP_008530469.1 NC_022324_p4 hypothetical protein phrog_25307 unknown function unknown function 1 1833 2069
YP_008530504.1 NC_022324_p39 hypothetical protein phrog_2035 unknown function unknown function -1 31554 31724
YP_008530556.1 NC_022324_p91 hypothetical protein phrog_3414 unknown function unknown function -1 51220 51504
YP_008530505.1 NC_022324_p40 hypothetical protein phrog_30784 unknown function unknown function -1 31721 31954
YP_008530530.1 NC_022324_p65 hypothetical protein phrog_520 unknown function unknown function -1 42280 42573
YP_008530545.1 NC_022324_p80 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 48597 48896
YP_008530485.1 NC_022324_p20 hypothetical protein phrog_123 tail terminator connector 1 14243 14689
YP_008530473.1 NC_022324_p8 hypothetical protein phrog_747 unknown function unknown function 1 4165 4422
YP_008530478.1 NC_022324_p13 Head Assembly Protease phrog_193 head maturation protease head and packaging 1 9957 10838
YP_008530527.1 NC_022324_p62 DnaB helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41164 41985
YP_008530471.1 NC_022324_p6 hypothetical protein phrog_553 minor tail protein tail 1 3182 3883
YP_008530525.1 NC_022324_p60 hypothetical protein phrog_1546 unknown function unknown function -1 40488 40901
YP_008530537.1 NC_022324_p72 hypothetical protein phrog_4285 transposase integration and excision -1 44987 45694
YP_008530514.1 NC_022324_p49 hypothetical protein phrog_221 metallo-phosphoesterase other -1 36332 37099
YP_008530543.1 NC_022324_p78 hypothetical protein phrog_1809 unknown function unknown function -1 47386 47781
YP_008530499.1 NC_022324_p34 hypothetical protein phrog_1560 unknown function unknown function 1 27967 28158
YP_008530467.1 NC_022324_p2 hypothetical protein phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 757 1053
YP_008530509.1 NC_022324_p44 hypothetical protein phrog_1781 unknown function unknown function -1 34475 34705
YP_008530557.1 NC_022324_p92 hypothetical protein phrog_2985 unknown function unknown function -1 51773 51928
YP_008530549.1 NC_022324_p84 hypothetical protein singleton unknown function unknown function -1 49517 49747
YP_008530484.1 NC_022324_p19 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 13844 14239
YP_008530487.1 NC_022324_p22 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15657 16456
YP_008530546.1 NC_022324_p81 hypothetical protein phrog_1720 unknown function unknown function -1 48893 49162
YP_008530532.1 NC_022324_p67 hypothetical protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 42857 43048
YP_008530508.1 NC_022324_p43 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 32612 34438
YP_008530477.1 NC_022324_p12 portal protein phrog_104 portal protein head and packaging 1 8518 9960
YP_008530531.1 NC_022324_p66 hypothetical protein phrog_2184 unknown function unknown function -1 42570 42860
YP_008530548.1 NC_022324_p83 hypothetical protein phrog_15840 unknown function unknown function -1 49359 49520
YP_008530466.1 NC_022324_p1 hypothetical protein phrog_4649 unknown function unknown function 1 608 760
YP_008530496.1 NC_022324_p31 minor tail protein phrog_346 minor tail protein tail 1 24220 26073
YP_008530503.1 NC_022324_p38 hypothetical protein phrog_1966 unknown function unknown function -1 31285 31557
YP_008530533.1 NC_022324_p68 hypothetical protein phrog_5961 unknown function unknown function -1 43045 43203
YP_008530492.1 NC_022324_p27 minor tail protein phrog_110 minor tail protein tail 1 21221 23023
YP_008530559.1 NC_022324_p94 hypothetical protein phrog_1387 unknown function unknown function -1 52194 52388
YP_008530512.1 NC_022324_p47 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 35403 36194
YP_008530472.1 NC_022324_p7 hypothetical protein phrog_1718 tail protein tail 1 3897 4157
YP_008530480.1 NC_022324_p15 Capsid phrog_10 major head protein head and packaging 1 11420 12436
YP_008530558.1 NC_022324_p93 hypothetical protein singleton unknown function unknown function -1 52085 52171
YP_008530483.1 NC_022324_p18 hypothetical protein phrog_320 head closure Hc1 connector 1 13437 13844
YP_008530529.1 NC_022324_p64 hypothetical protein phrog_1705 unknown function unknown function -1 42155 42283
YP_008530502.1 NC_022324_p37 serine integrase phrog_95 integrase integration and excision 1 29648 31210
YP_008530493.1 NC_022324_p28 hypothetical protein phrog_352 minor tail protein tail 1 23061 23507
YP_008530520.1 NC_022324_p55 hypothetical protein phrog_397 unknown function unknown function -1 38928 39071
YP_008530516.1 NC_022324_p51 hypothetical protein phrog_1167 phosphofructokinase other -1 37278 37844
YP_008530547.1 NC_022324_p82 hypothetical protein phrog_1387 unknown function unknown function -1 49159 49362
YP_008530553.1 NC_022324_p88 hypothetical protein phrog_932 unknown function unknown function -1 50245 50394
YP_008530488.1 NC_022324_p23 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15657 16034
YP_008530524.1 NC_022324_p59 hypothetical protein phrog_2740 unknown function unknown function -1 40313 40495
YP_008530497.1 NC_022324_p32 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 26066 27544
YP_008530517.1 NC_022324_p52 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 37841 38362
YP_008530506.1 NC_022324_p41 hypothetical protein phrog_1971 unknown function unknown function -1 31951 32238
YP_008530522.1 NC_022324_p57 hypothetical protein phrog_1019 unknown function unknown function -1 39544 39630
YP_008530510.1 NC_022324_p45 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 34736 35227
YP_008530560.1 NC_022324_p95 hypothetical protein phrog_1570 unknown function unknown function -1 52385 52708
YP_008530521.1 NC_022324_p56 Endo VII protein phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39090 39557
YP_008530564.1 NC_022324_p99 hypothetical protein phrog_21178 unknown function unknown function -1 53359 53634
YP_008530468.1 NC_022324_p3 hypothetical protein phrog_226 minor tail protein tail 1 1088 1522
YP_008530538.1 NC_022324_p73 hypothetical protein phrog_4604 unknown function unknown function -1 46031 46492
YP_008530474.1 NC_022324_p9 LysA phrog_317 endolysin lysis 1 4422 5855
YP_008530498.1 NC_022324_p33 hypothetical protein phrog_644 unknown function unknown function 1 27637 27957
YP_008530489.1 NC_022324_p24 tape measure protein phrog_305 tail length tape measure protein tail 1 16468 18939
YP_008530539.1 NC_022324_p74 hypothetical protein phrog_6068 unknown function unknown function -1 46489 46722
YP_008530513.1 NC_022324_p48 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 36187 36327
YP_008530554.1 NC_022324_p89 hypothetical protein phrog_12384 unknown function unknown function -1 50391 50660
YP_008530511.1 NC_022324_p46 hypothetical protein phrog_499 unknown function unknown function -1 35224 35406
YP_008530495.1 NC_022324_p30 hypothetical protein phrog_1397 unknown function unknown function 1 23758 24195
YP_008530494.1 NC_022324_p29 hypothetical protein phrog_981 minor tail protein tail 1 23504 23851
YP_008530542.1 NC_022324_p77 hypothetical protein phrog_1584 unknown function unknown function -1 47084 47389
YP_008530479.1 NC_022324_p14 scaffold protein phrog_233 head scaffolding protein head and packaging 1 10897 11409
YP_008530555.1 NC_022324_p90 hypothetical protein phrog_18281 unknown function unknown function -1 50941 51153