Genomic map of Mycobacterium phage Quink (NC_022330)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022330
Definition
Mycobacterium phage Quink, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus.
DB of origin
REFSEQ
Length
76586
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
151
%GC
62.99
Number of singletons
0
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008531098.1 NC_022330_p22 hypothetical protein phrog_15493 tail assembly chaperone tail 1 12635 13102
YP_008531105.1 NC_022330_p29 structural protein phrog_553 minor tail protein tail 1 27276 28238
YP_008531080.1 NC_022330_p4 hypothetical protein phrog_3858 unknown function unknown function 1 739 1032
YP_008531195.1 NC_022330_p119 hypothetical protein phrog_2279 unknown function unknown function 1 67287 67499
YP_008531193.1 NC_022330_p117 hypothetical protein phrog_2965 unknown function unknown function 1 66997 67134
YP_008531189.1 NC_022330_p113 hypothetical protein phrog_2252 endolysin; inhibits RNA polymerase lysis 1 64516 64995
YP_008531181.1 NC_022330_p105 hypothetical protein phrog_2785 unknown function unknown function 1 61884 62240
YP_008531224.1 NC_022330_p148 hypothetical protein phrog_2904 unknown function unknown function 1 75060 75419
YP_008531126.1 NC_022330_p50 hypothetical protein phrog_2702 unknown function unknown function -1 36893 37108
YP_008531089.1 NC_022330_p13 capsid protein phrog_10 major head protein head and packaging 1 7106 8599
YP_008531077.1 NC_022330_p1 hypothetical protein phrog_3456 unknown function unknown function 1 34 270
YP_008531202.1 NC_022330_p126 RDF protein phrog_2897 unknown function unknown function 1 68802 68933
YP_008531124.1 NC_022330_p48 RDF protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 36500 36667
YP_008531192.1 NC_022330_p116 RecA phrog_97 UvsX-like recombinase other 1 66038 67000
YP_008531203.1 NC_022330_p127 hypothetical protein phrog_3016 unknown function unknown function 1 68944 69078
YP_008531109.1 NC_022330_p33 lysin A phrog_317 endolysin lysis 1 29399 30901
YP_008531083.1 NC_022330_p7 hypothetical protein phrog_4101 unknown function unknown function -1 1685 1924
YP_008531146.1 NC_022330_p70 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 44987 45955
YP_008531097.1 NC_022330_p21 hypothetical protein phrog_621 tail assembly chaperone tail 1 12231 12692
YP_008531140.1 NC_022330_p64 RDF protein phrog_2744 unknown function unknown function 1 43311 43616
YP_008531215.1 NC_022330_p139 hypothetical protein phrog_2883 unknown function unknown function -1 72406 72954
YP_008531130.1 NC_022330_p54 integrase phrog_1 integrase integration and excision 1 38508 39389
YP_008531117.1 NC_022330_p41 HNH endonuclease phrog_647 unknown function unknown function -1 33991 34599
YP_008531084.1 NC_022330_p8 hypothetical protein phrog_2202 unknown function unknown function -1 1924 2232
YP_008531156.1 NC_022330_p80 HNH restriction enzyme phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 49406 49723
YP_008531199.1 NC_022330_p123 hypothetical protein phrog_2823 unknown function unknown function 1 68292 68492
YP_008531207.1 NC_022330_p131 hypothetical protein phrog_2942 unknown function unknown function -1 70225 70479
YP_008531221.1 NC_022330_p145 hypothetical protein phrog_2795 unknown function unknown function -1 74334 74546
YP_008531191.1 NC_022330_p115 hypothetical protein phrog_1941 unknown function unknown function 1 65788 66030
YP_008531122.1 NC_022330_p46 hypothetical protein phrog_6127 unknown function unknown function -1 36262 36375
YP_008531208.1 NC_022330_p132 hypothetical protein phrog_8201 unknown function unknown function -1 70476 70550
YP_008531217.1 NC_022330_p141 hypothetical protein phrog_4496 unknown function unknown function -1 73358 73711
YP_008531164.1 NC_022330_p88 hypothetical protein phrog_3836 unknown function unknown function 1 52811 53176
YP_008531178.1 NC_022330_p102 DNA methylase phrog_67 DNA methyltransferase other 1 59335 60558
YP_008531209.1 NC_022330_p133 hypothetical protein phrog_3034 unknown function unknown function -1 70547 70915
YP_008531085.1 NC_022330_p9 terminase phrog_9 terminase large subunit head and packaging 1 2277 3947
YP_008531131.1 NC_022330_p55 hypothetical protein phrog_2842 unknown function unknown function 1 39528 39767
YP_008531150.1 NC_022330_p74 hypothetical protein phrog_2771 unknown function unknown function 1 47381 47851
YP_008531225.1 NC_022330_p149 hypothetical protein phrog_8080 unknown function unknown function -1 75466 75684
YP_008531213.1 NC_022330_p137 HNH endonuclease phrog_3730 unknown function unknown function -1 72039 72164
YP_008531163.1 NC_022330_p87 hypothetical protein phrog_2747 unknown function unknown function 1 52597 52818
YP_008531116.1 NC_022330_p40 lysyl tRNA synthetase-like protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 33557 33943
YP_008531134.1 NC_022330_p58 hypothetical protein phrog_3071 unknown function unknown function 1 41270 41368
YP_008531103.1 NC_022330_p27 structural protein phrog_346 minor tail protein tail 1 22042 24438
YP_008531169.1 NC_022330_p93 RDF protein phrog_2844 unknown function unknown function 1 55016 55114
YP_008531197.1 NC_022330_p121 hypothetical protein phrog_2174 unknown function unknown function 1 67683 68144
YP_008531175.1 NC_022330_p99 RDF protein phrog_889 unknown function unknown function 1 57992 58462
YP_008531179.1 NC_022330_p103 SSB protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 60551 60991
YP_008531106.1 NC_022330_p30 hypothetical protein phrog_644 unknown function unknown function 1 28308 28736
YP_008531176.1 NC_022330_p100 hypothetical protein phrog_2788 unknown function unknown function 1 58464 58799
YP_008531093.1 NC_022330_p17 hypothetical protein phrog_2805 minor tail protein tail 1 9814 10194
YP_008531104.1 NC_022330_p28 structural protein/ betalactamase phrog_382 minor tail protein with lysin activity tail 1 24435 27275
YP_008531078.1 NC_022330_p2 hypothetical protein phrog_2829 unknown function unknown function 1 267 560
YP_008531127.1 NC_022330_p51 hypothetical protein phrog_2815 unknown function unknown function -1 37127 37273
YP_008531082.1 NC_022330_p6 terminase small subunit phrog_83 terminase small subunit head and packaging 1 1152 1613
YP_008531139.1 NC_022330_p63 hypothetical protein phrog_4633 unknown function unknown function 1 43076 43264
YP_008531158.1 NC_022330_p82 hypothetical protein phrog_1882 unknown function unknown function 1 49946 50596
YP_008531147.1 NC_022330_p71 hypothetical protein phrog_572 unknown function unknown function 1 45952 46362
YP_008531125.1 NC_022330_p49 HNH endonuclease phrog_2893 unknown function unknown function -1 36664 36900
YP_008531188.1 NC_022330_p112 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 64139 64513
YP_008531148.1 NC_022330_p72 hypothetical protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 46355 47077
YP_008531110.1 NC_022330_p34 hypothetical protein phrog_526 holin lysis 1 30905 31288
YP_008531152.1 NC_022330_p76 hypothetical protein phrog_572 unknown function unknown function 1 48216 48590
YP_008531210.1 NC_022330_p134 hypothetical protein phrog_1915 unknown function unknown function -1 70912 71370
YP_008531219.1 NC_022330_p143 hypothetical protein phrog_2772 unknown function unknown function -1 73886 74122
YP_008531090.1 NC_022330_p14 hypothetical protein phrog_2796 head-tail connector protein connector 1 8722 8901
YP_008531145.1 NC_022330_p69 hypothetical protein phrog_762 unknown function unknown function 1 44661 44990
YP_008531172.1 NC_022330_p96 hypothetical protein phrog_1590 unknown function unknown function 1 56742 57563
YP_008531200.1 NC_022330_p124 hypothetical protein phrog_2296 unknown function unknown function 1 68489 68626
YP_008531186.1 NC_022330_p110 hypothetical protein phrog_2846 unknown function unknown function 1 63572 63868
YP_008531222.1 NC_022330_p146 hypothetical protein phrog_5970 unknown function unknown function -1 74559 74807
YP_008531123.1 NC_022330_p47 hypothetical protein phrog_4396 unknown function unknown function -1 36372 36500
YP_008531151.1 NC_022330_p75 hypothetical protein phrog_1389 unknown function unknown function 1 47851 48219
YP_008531165.1 NC_022330_p89 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 53173 53535
YP_008531155.1 NC_022330_p79 hypothetical protein phrog_289 GTP-binding domain other 1 48996 49409
YP_008531128.1 NC_022330_p52 hypothetical protein phrog_2759 unknown function unknown function -1 37273 37668
YP_008531157.1 NC_022330_p81 hypothetical protein phrog_1673 unknown function unknown function 1 49713 49949
YP_008531170.1 NC_022330_p94 hypothetical protein phrog_10857 unknown function unknown function 1 55111 55383
YP_008531187.1 NC_022330_p111 hypothetical protein phrog_1042 unknown function unknown function 1 63865 64128
YP_008531198.1 NC_022330_p122 hypothetical protein phrog_2764 unknown function unknown function 1 68141 68308
YP_008531135.1 NC_022330_p59 hypothetical protein phrog_2852 unknown function unknown function 1 41365 41502
YP_008531185.1 NC_022330_p109 hypothetical protein phrog_15491 unknown function unknown function 1 63163 63279
YP_008531099.1 NC_022330_p23 tapemeasure protein phrog_2723 tail length tape measure protein tail 1 13095 17825
YP_008531160.1 NC_022330_p84 DNA B-like helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 50918 52180
YP_008531174.1 NC_022330_p98 hypothetical protein phrog_2853 unknown function unknown function 1 57837 57995
YP_008531206.1 NC_022330_p130 ParBc domain protein phrog_2579 ParB C-terminal domain DNA, RNA and nucleotide metabolism -1 69717 70106
YP_008531087.1 NC_022330_p11 portal protein phrog_12 portal protein head and packaging 1 4167 5723
YP_008531177.1 NC_022330_p101 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 58796 59338
YP_008531171.1 NC_022330_p95 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 55380 56705
YP_008531161.1 NC_022330_p85 HNH endonuclease phrog_1091 unknown function unknown function 1 52177 52365
YP_008531205.1 NC_022330_p129 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 69457 69720
YP_008531101.1 NC_022330_p25 structural/ tail protein phrog_110 minor tail protein tail 1 19504 21183
YP_008531194.1 NC_022330_p118 hypothetical protein phrog_2755 unknown function unknown function 1 67121 67294
YP_008531129.1 NC_022330_p53 hypothetical protein phrog_2847 unknown function unknown function -1 37955 38257
YP_008531154.1 NC_022330_p78 hypothetical protein phrog_2793 unknown function unknown function 1 48766 48999
YP_008531180.1 NC_022330_p104 Clp protein phrog_94 head maturation protease head and packaging 1 61081 61887
YP_008531108.1 NC_022330_p32 hypothetical protein phrog_411 unknown function unknown function 1 29041 29325
YP_008531211.1 NC_022330_p135 hypothetical protein phrog_1587 unknown function unknown function -1 71385 71732
YP_008531092.1 NC_022330_p16 hypothetical protein phrog_1531 head closure connector 1 9482 9817
YP_008531132.1 NC_022330_p56 hypothetical protein phrog_950 unknown function unknown function -1 39745 40518
YP_008531120.1 NC_022330_p44 HNH endonuclease phrog_1573 DNA methyltransferase other -1 35560 35997
YP_008531201.1 NC_022330_p125 hypothetical protein phrog_2925 unknown function unknown function 1 68623 68802
YP_008531133.1 NC_022330_p57 hypothetical protein phrog_2745 transcriptional repressor transcription regulation -1 40613 41053
YP_008531113.1 NC_022330_p37 hypothetical protein phrog_726 unknown function unknown function 1 32470 32886
YP_008531138.1 NC_022330_p62 hypothetical protein phrog_2800 unknown function unknown function 1 42489 42767
YP_008531218.1 NC_022330_p142 HNH endonuclease phrog_1438 unknown function unknown function -1 73716 73889
YP_008531182.1 NC_022330_p106 hypothetical protein phrog_2757 unknown function unknown function 1 62241 62531
YP_008531096.1 NC_022330_p20 structural protein phrog_5711 head fiber protein head and packaging 1 11637 12110
YP_008531212.1 NC_022330_p136 hypothetical protein phrog_4547 unknown function unknown function -1 71716 72033
YP_008531143.1 NC_022330_p67 hypothetical protein phrog_2221 unknown function unknown function 1 43982 44143
YP_008531119.1 NC_022330_p43 HNH endonuclease phrog_3593 HNH endonuclease DNA, RNA and nucleotide metabolism -1 34976 35563
YP_008531088.1 NC_022330_p12 hypothetical protein phrog_2753 head maturation protease head and packaging 1 5726 7018
YP_008531081.1 NC_022330_p5 hypothetical protein phrog_8426 unknown function unknown function 1 1010 1159
YP_008531102.1 NC_022330_p26 tail protein phrog_732 minor tail protein tail 1 21192 22025
YP_008531226.1 NC_022330_p150 hypothetical protein phrog_2762 unknown function unknown function 1 75793 76014
YP_008531214.1 NC_022330_p138 hypothetical protein phrog_2287 unknown function unknown function -1 72154 72390
YP_008531100.1 NC_022330_p24 structural protein phrog_106 minor tail protein tail 1 17855 19516
YP_008531162.1 NC_022330_p86 hypothetical protein phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 52347 52622
YP_008531167.1 NC_022330_p91 Pnk phrog_505 polynucleotide kinase other 1 53881 54822
YP_008531141.1 NC_022330_p65 hypothetical protein phrog_3463 unknown function unknown function 1 43635 43742
YP_008531142.1 NC_022330_p66 hypothetical protein phrog_2147 unknown function unknown function 1 43750 44049
YP_008531149.1 NC_022330_p73 hypothetical protein phrog_2750 unknown function unknown function 1 47070 47381
YP_008531183.1 NC_022330_p107 hypothetical protein phrog_1969 unknown function unknown function 1 62536 62847
YP_008531118.1 NC_022330_p42 HNH endonuclease phrog_722 unknown function unknown function -1 34596 34979
YP_008531136.1 NC_022330_p60 pentapeptide repeat protein phrog_923 unknown function unknown function 1 41499 42344
YP_008531223.1 NC_022330_p147 hypothetical protein phrog_5130 unknown function unknown function -1 74804 74995
YP_008531184.1 NC_022330_p108 HNH endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 62900 63190
YP_008531091.1 NC_022330_p15 hypothetical protein phrog_442 head-tail adaptor connector 1 8901 9467
YP_008531111.1 NC_022330_p35 hypothetical protein phrog_2424 unknown function unknown function 1 31281 31619
YP_008531144.1 NC_022330_p68 secreted protein phrog_301 secreted protein other 1 44332 44664
YP_008531216.1 NC_022330_p140 hypothetical protein phrog_3174 unknown function unknown function -1 72958 73353
YP_008531204.1 NC_022330_p128 hypothetical protein phrog_6448 unknown function unknown function 1 69080 69193
YP_008531121.1 NC_022330_p45 HNH endonuclease phrog_722 unknown function unknown function -1 35994 36269
YP_008531159.1 NC_022330_p83 hypothetical protein phrog_572 unknown function unknown function 1 50578 50925
YP_008531153.1 NC_022330_p77 hypothetical protein phrog_1622 unknown function unknown function 1 48590 48769
YP_008531107.1 NC_022330_p31 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 28723 28908
YP_008531166.1 NC_022330_p90 hypothetical protein phrog_2894 unknown function unknown function 1 53532 53726
YP_008531168.1 NC_022330_p92 hypothetical protein phrog_7164 unknown function unknown function 1 54822 55019
YP_008531095.1 NC_022330_p19 major tail subunit phrog_476 major tail protein tail 1 10603 11577
YP_008531086.1 NC_022330_p10 hypothetical protein phrog_2845 unknown function unknown function 1 3959 4180
YP_008531227.1 NC_022330_p151 hypothetical protein phrog_8627 unknown function unknown function 1 76059 76472
YP_008531137.1 NC_022330_p61 hypothetical protein phrog_2463 unknown function unknown function 1 42346 42492
YP_008531196.1 NC_022330_p120 hypothetical protein phrog_3062 unknown function unknown function 1 67480 67734
YP_008531220.1 NC_022330_p144 hypothetical protein phrog_7581 unknown function unknown function -1 74125 74328
YP_008531190.1 NC_022330_p114 polymerase II phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 65006 65791
YP_008531115.1 NC_022330_p39 hypothetical protein phrog_9947 Lsr2-like DNA bridging protein DNA, RNA and nucleotide metabolism -1 33375 33554
YP_008531079.1 NC_022330_p3 hypothetical protein phrog_2775 unknown function unknown function 1 557 742
YP_008531173.1 NC_022330_p97 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 57560 57820
YP_008531094.1 NC_022330_p18 hypothetical protein phrog_813 head-tail adaptor connector 1 10172 10576
YP_008531114.1 NC_022330_p38 NrdH phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 32893 33138
YP_008531112.1 NC_022330_p36 lysin B phrog_102 endolysin lysis 1 31616 32473