| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_022334 |
Definition |
Propionibacterium phage PHL112N00, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29266 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
46 |
%GC |
54.48 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008531585.1 | NC_022334_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26244 | 26555 |
| YP_008531575.1 | NC_022334_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21206 | 21607 |
| YP_008531573.1 | NC_022334_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20090 | 20653 |
| YP_008531581.1 | NC_022334_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24691 | 25041 |
| YP_008531558.1 | NC_022334_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8502 | 11267 |
| YP_008531547.1 | NC_022334_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1886 | 3211 |
| YP_008531556.1 | NC_022334_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7812 | 8108 |
| YP_008531553.1 | NC_022334_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6453 | 6743 |
| YP_008531564.1 | NC_022334_p20 | amidase | phrog_670 | endolysin | lysis | 1 | 15414 | 16277 |
| YP_008531580.1 | NC_022334_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23748 | 24689 |
| YP_008531561.1 | NC_022334_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13404 | 14234 |
| YP_008531579.1 | NC_022334_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23341 | 23751 |
| YP_008531582.1 | NC_022334_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25147 | 25347 |
| YP_008531572.1 | NC_022334_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19539 | 20093 |
| YP_008531574.1 | NC_022334_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20698 | 21369 |
| YP_008531554.1 | NC_022334_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6740 | 7111 |
| YP_008531587.1 | NC_022334_p43 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27081 | 27191 |
| YP_008531589.1 | NC_022334_p45 | hypothetical protein | phrog_13647 | unknown function | unknown function | 1 | 28682 | 28816 |
| YP_008531586.1 | NC_022334_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26592 | 26900 |
| YP_008531562.1 | NC_022334_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14279 | 14542 |
| YP_008531578.1 | NC_022334_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22830 | 23288 |
| YP_008531550.1 | NC_022334_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4642 | 5592 |
| YP_008531548.1 | NC_022334_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3218 | 3973 |
| YP_008531590.1 | NC_022334_p46 | endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 28913 | 29215 |
| YP_008531549.1 | NC_022334_p5 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4084 | 4638 |
| YP_008531555.1 | NC_022334_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7164 | 7784 |
| YP_008531588.1 | NC_022334_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27330 | 27464 |
| YP_008531571.1 | NC_022334_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19364 | 19555 |
| YP_008531577.1 | NC_022334_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21923 | 22786 |
| YP_008531584.1 | NC_022334_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25588 | 26121 |
| YP_008531570.1 | NC_022334_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18324 | 19367 |
| YP_008531563.1 | NC_022334_p19 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | 1 | 14546 | 15361 |
| YP_008531557.1 | NC_022334_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8207 | 8494 |
| YP_008531551.1 | NC_022334_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5636 | 6097 |
| YP_008531567.1 | NC_022334_p23 | sigma factor | phrog_1729 | unknown function | unknown function | -1 | 17300 | 17692 |
| YP_008531546.1 | NC_022334_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 378 | 1889 |
| YP_008531552.1 | NC_022334_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6099 | 6446 |
| YP_008531545.1 | NC_022334_p1 | excinuclease | phrog_1897 | terminase small subunit | head and packaging | 1 | 2 | 373 |
| YP_008531566.1 | NC_022334_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16774 | 17295 |
| YP_008531560.1 | NC_022334_p16 | protease | phrog_110 | minor tail protein | tail | 1 | 12236 | 13396 |
| YP_008531576.1 | NC_022334_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21567 | 21923 |
| YP_008531583.1 | NC_022334_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25344 | 25571 |
| YP_008531559.1 | NC_022334_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 11284 | 12231 |
| YP_008531565.1 | NC_022334_p21 | holin | phrog_443 | holin | lysis | 1 | 16290 | 16688 |
| YP_008531569.1 | NC_022334_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17993 | 18313 |
| YP_008531568.1 | NC_022334_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17696 | 17980 |