| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_022336 |
Definition |
Propionibacterium phage PHL010M04, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29511 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
53.98 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008531636.1 | NC_022336_p1 | excinuclease | phrog_1897 | terminase small subunit | head and packaging | 1 | 34 | 372 |
| YP_008531646.1 | NC_022336_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7155 | 7787 |
| YP_008531647.1 | NC_022336_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7815 | 8111 |
| YP_008531659.1 | NC_022336_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17664 | 17951 |
| YP_008531645.1 | NC_022336_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6731 | 7102 |
| YP_008531665.1 | NC_022336_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20681 | 21406 |
| YP_008531677.1 | NC_022336_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26549 | 26890 |
| YP_008531673.1 | NC_022336_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25126 | 25329 |
| YP_008531638.1 | NC_022336_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1885 | 3210 |
| YP_008531641.1 | NC_022336_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4637 | 5584 |
| YP_008531658.1 | NC_022336_p23 | sigma factor | phrog_1729 | unknown function | unknown function | -1 | 17268 | 17660 |
| YP_008531669.1 | NC_022336_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22805 | 23275 |
| YP_008531680.1 | NC_022336_p45 | endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29157 | 29459 |
| YP_008531652.1 | NC_022336_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13417 | 14235 |
| YP_008531668.1 | NC_022336_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21906 | 22769 |
| YP_008531654.1 | NC_022336_p19 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | 1 | 14541 | 15347 |
| YP_008531639.1 | NC_022336_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3214 | 3969 |
| YP_008531662.1 | NC_022336_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19338 | 19529 |
| YP_008531660.1 | NC_022336_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17968 | 18288 |
| YP_008531656.1 | NC_022336_p21 | holin | phrog_443 | holin | lysis | 1 | 16267 | 16665 |
| YP_008531643.1 | NC_022336_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6091 | 6438 |
| YP_008531679.1 | NC_022336_p44 | hypothetical protein | phrog_13647 | unknown function | unknown function | 1 | 28960 | 29061 |
| YP_008531642.1 | NC_022336_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5628 | 6089 |
| YP_008531657.1 | NC_022336_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16748 | 17263 |
| YP_008531640.1 | NC_022336_p5 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4079 | 4630 |
| YP_008531664.1 | NC_022336_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20070 | 20636 |
| YP_008531675.1 | NC_022336_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25576 | 26115 |
| YP_008531671.1 | NC_022336_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23728 | 24666 |
| YP_008531666.1 | NC_022336_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21189 | 21590 |
| YP_008531653.1 | NC_022336_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14283 | 14540 |
| YP_008531650.1 | NC_022336_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 11286 | 12233 |
| YP_008531674.1 | NC_022336_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25326 | 25553 |
| YP_008531670.1 | NC_022336_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23324 | 23731 |
| YP_008531644.1 | NC_022336_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6444 | 6734 |
| YP_008531649.1 | NC_022336_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8505 | 11270 |
| YP_008531651.1 | NC_022336_p16 | protease | phrog_110 | minor tail protein | tail | 1 | 12238 | 13398 |
| YP_008531661.1 | NC_022336_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18298 | 19341 |
| YP_008531676.1 | NC_022336_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26235 | 26546 |
| YP_008531648.1 | NC_022336_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8207 | 8497 |
| YP_008531637.1 | NC_022336_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 377 | 1888 |
| YP_008531663.1 | NC_022336_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19513 | 20073 |
| YP_008531655.1 | NC_022336_p20 | amidase | phrog_670 | endolysin | lysis | 1 | 15397 | 16260 |
| YP_008531667.1 | NC_022336_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21550 | 21909 |
| YP_008531672.1 | NC_022336_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24668 | 25018 |
| YP_008531678.1 | NC_022336_p43 | hypothetical protein | phrog_20534 | unknown function | unknown function | 1 | 27311 | 27412 |