Genomic map of Propionibacterium phage PHL010M04 (NC_022336)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022336
Definition
Propionibacterium phage PHL010M04, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus.
DB of origin
REFSEQ
Length
29511
Host Name
Propionibacterium acnes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
45
%GC
53.98
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008531636.1 NC_022336_p1 excinuclease phrog_1897 terminase small subunit head and packaging 1 34 372
YP_008531646.1 NC_022336_p11 major tail protein phrog_117 major tail protein tail 1 7155 7787
YP_008531647.1 NC_022336_p12 hypothetical protein phrog_1927 tail assembly chaperone tail 1 7815 8111
YP_008531659.1 NC_022336_p24 hypothetical protein phrog_1947 unknown function unknown function -1 17664 17951
YP_008531645.1 NC_022336_p10 hypothetical protein phrog_1892 minor tail protein tail 1 6731 7102
YP_008531665.1 NC_022336_p30 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 20681 21406
YP_008531677.1 NC_022336_p42 hypothetical protein phrog_919 unknown function unknown function -1 26549 26890
YP_008531673.1 NC_022336_p38 hypothetical protein phrog_1937 unknown function unknown function -1 25126 25329
YP_008531638.1 NC_022336_p3 portal protein phrog_104 portal protein head and packaging 1 1885 3210
YP_008531641.1 NC_022336_p6 major head protein phrog_10 major head protein head and packaging 1 4637 5584
YP_008531658.1 NC_022336_p23 sigma factor phrog_1729 unknown function unknown function -1 17268 17660
YP_008531669.1 NC_022336_p34 hypothetical protein phrog_1288 unknown function unknown function -1 22805 23275
YP_008531680.1 NC_022336_p45 endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 29157 29459
YP_008531652.1 NC_022336_p17 hypothetical protein phrog_1910 lectin other 1 13417 14235
YP_008531668.1 NC_022336_p33 DNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 21906 22769
YP_008531654.1 NC_022336_p19 collagen-like protein phrog_1806 collagen like minor tail tail 1 14541 15347
YP_008531639.1 NC_022336_p4 hypothetical protein phrog_193 head maturation protease head and packaging 1 3214 3969
YP_008531662.1 NC_022336_p27 hypothetical protein phrog_1923 unknown function unknown function -1 19338 19529
YP_008531660.1 NC_022336_p25 hypothetical protein phrog_1340 unknown function unknown function -1 17968 18288
YP_008531656.1 NC_022336_p21 holin phrog_443 holin lysis 1 16267 16665
YP_008531643.1 NC_022336_p8 hypothetical protein phrog_501 head closure Hc1 connector 1 6091 6438
YP_008531679.1 NC_022336_p44 hypothetical protein phrog_13647 unknown function unknown function 1 28960 29061
YP_008531642.1 NC_022336_p7 hypothetical protein phrog_1290 head-tail adaptor connector 1 5628 6089
YP_008531657.1 NC_022336_p22 hypothetical protein phrog_2092 unknown function unknown function -1 16748 17263
YP_008531640.1 NC_022336_p5 scaffold protein phrog_1879 head scaffolding protein head and packaging 1 4079 4630
YP_008531664.1 NC_022336_p29 hypothetical protein phrog_1881 unknown function unknown function -1 20070 20636
YP_008531675.1 NC_022336_p40 hypothetical protein phrog_1908 unknown function unknown function -1 25576 26115
YP_008531671.1 NC_022336_p36 exonuclease phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 23728 24666
YP_008531666.1 NC_022336_p31 DNA primase phrog_2304 DNA primase DNA, RNA and nucleotide metabolism -1 21189 21590
YP_008531653.1 NC_022336_p18 hypothetical protein phrog_1958 minor tail protein tail 1 14283 14540
YP_008531650.1 NC_022336_p15 minor tail subunit phrog_106 minor tail protein tail 1 11286 12233
YP_008531674.1 NC_022336_p39 hypothetical protein phrog_1884 unknown function unknown function -1 25326 25553
YP_008531670.1 NC_022336_p35 hypothetical protein phrog_1890 unknown function unknown function -1 23324 23731
YP_008531644.1 NC_022336_p9 hypothetical protein phrog_387 neck protein connector 1 6444 6734
YP_008531649.1 NC_022336_p14 tape measure protein phrog_58 tail length tape measure protein tail 1 8505 11270
YP_008531651.1 NC_022336_p16 protease phrog_110 minor tail protein tail 1 12238 13398
YP_008531661.1 NC_022336_p26 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 18298 19341
YP_008531676.1 NC_022336_p41 hypothetical protein phrog_919 unknown function unknown function -1 26235 26546
YP_008531648.1 NC_022336_p13 hypothetical protein phrog_3166 unknown function unknown function 1 8207 8497
YP_008531637.1 NC_022336_p2 terminase phrog_9 terminase large subunit head and packaging 1 377 1888
YP_008531663.1 NC_022336_p28 hypothetical protein phrog_2548 unknown function unknown function -1 19513 20073
YP_008531655.1 NC_022336_p20 amidase phrog_670 endolysin lysis 1 15397 16260
YP_008531667.1 NC_022336_p32 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 21550 21909
YP_008531672.1 NC_022336_p37 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24668 25018
YP_008531678.1 NC_022336_p43 hypothetical protein phrog_20534 unknown function unknown function 1 27311 27412