| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_022338 |
Definition |
Propionibacterium phage PHL060L00, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29514 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
46 |
%GC |
54.04 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008531728.1 | NC_022338_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1881 | 3206 |
| YP_008531769.1 | NC_022338_p44 | hypothetical protein | phrog_8276 | unknown function | unknown function | 1 | 28653 | 28808 |
| YP_008531762.1 | NC_022338_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24512 | 24865 |
| YP_008531732.1 | NC_022338_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5626 | 6087 |
| YP_008531743.1 | NC_022338_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14294 | 14557 |
| YP_008531734.1 | NC_022338_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6443 | 6733 |
| YP_008531770.1 | NC_022338_p45 | hypothetical protein | phrog_7333 | unknown function | unknown function | 1 | 28964 | 29125 |
| YP_008531755.1 | NC_022338_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20511 | 21182 |
| YP_008531758.1 | NC_022338_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21736 | 22599 |
| YP_008531727.1 | NC_022338_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 373 | 1884 |
| YP_008531749.1 | NC_022338_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17496 | 17771 |
| YP_008531761.1 | NC_022338_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23571 | 24512 |
| YP_008531740.1 | NC_022338_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 11302 | 12249 |
| YP_008531766.1 | NC_022338_p41 | hypothetical protein | phrog_7707 | unknown function | unknown function | -1 | 26035 | 26322 |
| YP_008531737.1 | NC_022338_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7831 | 8127 |
| YP_008531738.1 | NC_022338_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8226 | 8513 |
| YP_008531756.1 | NC_022338_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21019 | 21420 |
| YP_008531753.1 | NC_022338_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19343 | 19906 |
| YP_008531736.1 | NC_022338_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7151 | 7804 |
| YP_008531759.1 | NC_022338_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22646 | 23119 |
| YP_008531745.1 | NC_022338_p20 | amidase | phrog_670 | endolysin | lysis | 1 | 15206 | 16072 |
| YP_008531748.1 | NC_022338_p23 | sigma factor | phrog_1729 | unknown function | unknown function | -1 | 17099 | 17491 |
| YP_008531767.1 | NC_022338_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26460 | 26774 |
| YP_008531764.1 | NC_022338_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25168 | 25395 |
| YP_008531746.1 | NC_022338_p21 | holin | phrog_443 | holin | lysis | 1 | 16085 | 16486 |
| YP_008531744.1 | NC_022338_p19 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | 1 | 14561 | 15151 |
| YP_008531739.1 | NC_022338_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8521 | 11286 |
| YP_008531742.1 | NC_022338_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13431 | 14249 |
| YP_008531751.1 | NC_022338_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18119 | 19165 |
| YP_008531731.1 | NC_022338_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4633 | 5580 |
| YP_008531750.1 | NC_022338_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17788 | 18108 |
| YP_008531741.1 | NC_022338_p16 | protease | phrog_110 | minor tail protein | tail | 1 | 12254 | 13414 |
| YP_008531747.1 | NC_022338_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16573 | 17094 |
| YP_008531726.1 | NC_022338_p1 | excinuclease | phrog_1897 | terminase small subunit | head and packaging | 1 | 2 | 373 |
| YP_008531730.1 | NC_022338_p5 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4072 | 4626 |
| YP_008531757.1 | NC_022338_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21380 | 21736 |
| YP_008531760.1 | NC_022338_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23170 | 23574 |
| YP_008531771.1 | NC_022338_p46 | endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29161 | 29463 |
| YP_008531733.1 | NC_022338_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6089 | 6436 |
| YP_008531735.1 | NC_022338_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6730 | 7101 |
| YP_008531754.1 | NC_022338_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 19903 | 20466 |
| YP_008531768.1 | NC_022338_p43 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26808 | 27116 |
| YP_008531752.1 | NC_022338_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19162 | 19359 |
| YP_008531765.1 | NC_022338_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25418 | 25951 |
| YP_008531763.1 | NC_022338_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 24971 | 25171 |
| YP_008531729.1 | NC_022338_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3213 | 3968 |