Genomic map of Propionibacterium phage PHL060L00 (NC_022338)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022338
Definition
Propionibacterium phage PHL060L00, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus.
DB of origin
REFSEQ
Length
29514
Host Name
Propionibacterium acnes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
46
%GC
54.04
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008531728.1 NC_022338_p3 portal protein phrog_104 portal protein head and packaging 1 1881 3206
YP_008531769.1 NC_022338_p44 hypothetical protein phrog_8276 unknown function unknown function 1 28653 28808
YP_008531762.1 NC_022338_p37 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24512 24865
YP_008531732.1 NC_022338_p7 hypothetical protein phrog_1290 head-tail adaptor connector 1 5626 6087
YP_008531743.1 NC_022338_p18 hypothetical protein phrog_1958 minor tail protein tail 1 14294 14557
YP_008531734.1 NC_022338_p9 hypothetical protein phrog_387 neck protein connector 1 6443 6733
YP_008531770.1 NC_022338_p45 hypothetical protein phrog_7333 unknown function unknown function 1 28964 29125
YP_008531755.1 NC_022338_p30 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 20511 21182
YP_008531758.1 NC_022338_p33 DNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 21736 22599
YP_008531727.1 NC_022338_p2 terminase phrog_9 terminase large subunit head and packaging 1 373 1884
YP_008531749.1 NC_022338_p24 hypothetical protein phrog_1947 unknown function unknown function -1 17496 17771
YP_008531761.1 NC_022338_p36 exonuclease phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 23571 24512
YP_008531740.1 NC_022338_p15 minor tail subunit phrog_106 minor tail protein tail 1 11302 12249
YP_008531766.1 NC_022338_p41 hypothetical protein phrog_7707 unknown function unknown function -1 26035 26322
YP_008531737.1 NC_022338_p12 hypothetical protein phrog_1927 tail assembly chaperone tail 1 7831 8127
YP_008531738.1 NC_022338_p13 hypothetical protein phrog_3166 unknown function unknown function 1 8226 8513
YP_008531756.1 NC_022338_p31 DNA primase phrog_2304 DNA primase DNA, RNA and nucleotide metabolism -1 21019 21420
YP_008531753.1 NC_022338_p28 hypothetical protein phrog_2548 unknown function unknown function -1 19343 19906
YP_008531736.1 NC_022338_p11 major tail protein phrog_117 major tail protein tail 1 7151 7804
YP_008531759.1 NC_022338_p34 hypothetical protein phrog_1288 unknown function unknown function -1 22646 23119
YP_008531745.1 NC_022338_p20 amidase phrog_670 endolysin lysis 1 15206 16072
YP_008531748.1 NC_022338_p23 sigma factor phrog_1729 unknown function unknown function -1 17099 17491
YP_008531767.1 NC_022338_p42 hypothetical protein phrog_919 unknown function unknown function -1 26460 26774
YP_008531764.1 NC_022338_p39 hypothetical protein phrog_1884 unknown function unknown function -1 25168 25395
YP_008531746.1 NC_022338_p21 holin phrog_443 holin lysis 1 16085 16486
YP_008531744.1 NC_022338_p19 collagen-like protein phrog_1806 collagen like minor tail tail 1 14561 15151
YP_008531739.1 NC_022338_p14 tape measure protein phrog_58 tail length tape measure protein tail 1 8521 11286
YP_008531742.1 NC_022338_p17 hypothetical protein phrog_1910 lectin other 1 13431 14249
YP_008531751.1 NC_022338_p26 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 18119 19165
YP_008531731.1 NC_022338_p6 major head protein phrog_10 major head protein head and packaging 1 4633 5580
YP_008531750.1 NC_022338_p25 hypothetical protein phrog_1340 unknown function unknown function -1 17788 18108
YP_008531741.1 NC_022338_p16 protease phrog_110 minor tail protein tail 1 12254 13414
YP_008531747.1 NC_022338_p22 hypothetical protein phrog_2092 unknown function unknown function -1 16573 17094
YP_008531726.1 NC_022338_p1 excinuclease phrog_1897 terminase small subunit head and packaging 1 2 373
YP_008531730.1 NC_022338_p5 scaffold protein phrog_1879 head scaffolding protein head and packaging 1 4072 4626
YP_008531757.1 NC_022338_p32 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 21380 21736
YP_008531760.1 NC_022338_p35 hypothetical protein phrog_1890 unknown function unknown function -1 23170 23574
YP_008531771.1 NC_022338_p46 endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 29161 29463
YP_008531733.1 NC_022338_p8 hypothetical protein phrog_501 head closure Hc1 connector 1 6089 6436
YP_008531735.1 NC_022338_p10 hypothetical protein phrog_1892 minor tail protein tail 1 6730 7101
YP_008531754.1 NC_022338_p29 hypothetical protein phrog_1881 unknown function unknown function -1 19903 20466
YP_008531768.1 NC_022338_p43 hypothetical protein phrog_919 unknown function unknown function -1 26808 27116
YP_008531752.1 NC_022338_p27 hypothetical protein phrog_1923 unknown function unknown function -1 19162 19359
YP_008531765.1 NC_022338_p40 hypothetical protein phrog_1908 unknown function unknown function -1 25418 25951
YP_008531763.1 NC_022338_p38 hypothetical protein phrog_1937 unknown function unknown function -1 24971 25171
YP_008531729.1 NC_022338_p4 hypothetical protein phrog_193 head maturation protease head and packaging 1 3213 3968