| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_022340 |
Definition |
Propionibacterium phage PHL114L00, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29464 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
46 |
%GC |
54.2 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008531818.1 | NC_022340_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 386 | 1897 |
| YP_008531836.1 | NC_022340_p20 | amidase | phrog_670 | endolysin | lysis | 1 | 15408 | 16268 |
| YP_008531820.1 | NC_022340_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3223 | 3978 |
| YP_008531817.1 | NC_022340_p1 | excinuclease | phrog_1897 | terminase small subunit | head and packaging | 1 | 34 | 381 |
| YP_008531860.1 | NC_022340_p44 | hypothetical protein | phrog_8276 | unknown function | unknown function | 1 | 28619 | 28756 |
| YP_008531830.1 | NC_022340_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8508 | 11273 |
| YP_008531850.1 | NC_022340_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22786 | 23244 |
| YP_008531841.1 | NC_022340_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17935 | 18255 |
| YP_008531848.1 | NC_022340_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21522 | 21878 |
| YP_008531832.1 | NC_022340_p16 | protease | phrog_110 | minor tail protein | tail | 1 | 12241 | 13401 |
| YP_008531823.1 | NC_022340_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5635 | 6096 |
| YP_008531834.1 | NC_022340_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14282 | 14536 |
| YP_008531835.1 | NC_022340_p19 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | 1 | 14540 | 15355 |
| YP_008531855.1 | NC_022340_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25282 | 25509 |
| YP_008531854.1 | NC_022340_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25085 | 25285 |
| YP_008531829.1 | NC_022340_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8213 | 8500 |
| YP_008531837.1 | NC_022340_p21 | holin | phrog_443 | holin | lysis | 1 | 16281 | 16679 |
| YP_008531838.1 | NC_022340_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16766 | 17254 |
| YP_008531856.1 | NC_022340_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25532 | 26065 |
| YP_008531819.1 | NC_022340_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1894 | 3219 |
| YP_008531858.1 | NC_022340_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26536 | 26844 |
| YP_008531821.1 | NC_022340_p5 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4083 | 4637 |
| YP_008531845.1 | NC_022340_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20043 | 20609 |
| YP_008531826.1 | NC_022340_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6739 | 7110 |
| YP_008531851.1 | NC_022340_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23284 | 23691 |
| YP_008531833.1 | NC_022340_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13406 | 14236 |
| YP_008531859.1 | NC_022340_p43 | hypothetical protein | phrog_20534 | unknown function | unknown function | 1 | 27275 | 27433 |
| YP_008531849.1 | NC_022340_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21878 | 22741 |
| YP_008531857.1 | NC_022340_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26189 | 26503 |
| YP_008531847.1 | NC_022340_p31 | DNA primase | singleton | unknown function | unknown function | -1 | 21012 | 21518 |
| YP_008531825.1 | NC_022340_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6452 | 6742 |
| YP_008531844.1 | NC_022340_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19486 | 20046 |
| YP_008531822.1 | NC_022340_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4641 | 5591 |
| YP_008531842.1 | NC_022340_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18265 | 19308 |
| YP_008531828.1 | NC_022340_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7818 | 8114 |
| YP_008531846.1 | NC_022340_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20653 | 21324 |
| YP_008531827.1 | NC_022340_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7168 | 7791 |
| YP_008531853.1 | NC_022340_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24626 | 24979 |
| YP_008531824.1 | NC_022340_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6098 | 6445 |
| YP_008531852.1 | NC_022340_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23688 | 24626 |
| YP_008531839.1 | NC_022340_p23 | sigma factor | phrog_1729 | unknown function | unknown function | -1 | 17260 | 17640 |
| YP_008531843.1 | NC_022340_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19305 | 19502 |
| YP_008531840.1 | NC_022340_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17644 | 17919 |
| YP_008531861.1 | NC_022340_p45 | hypothetical protein | phrog_7333 | unknown function | unknown function | 1 | 28892 | 29083 |
| YP_008531831.1 | NC_022340_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 11289 | 12236 |
| YP_008531862.1 | NC_022340_p46 | endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29111 | 29413 |