| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_022342 |
Definition |
Propionibacterium phage PHL111M01, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29140 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
54.33 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008531941.1 | NC_022342_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23048 | 23452 |
| YP_008531932.1 | NC_022342_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18293 | 19339 |
| YP_008531938.1 | NC_022342_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21257 | 21613 |
| YP_008531926.1 | NC_022342_p20 | amidase | phrog_670 | endolysin | lysis | 1 | 15383 | 16246 |
| YP_008531917.1 | NC_022342_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7168 | 7788 |
| YP_008531934.1 | NC_022342_p28 | hypothetical protein | phrog_5969 | unknown function | unknown function | -1 | 19517 | 19729 |
| YP_008531939.1 | NC_022342_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21523 | 22476 |
| YP_008531915.1 | NC_022342_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6453 | 6743 |
| YP_008531931.1 | NC_022342_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17962 | 18282 |
| YP_008531949.1 | NC_022342_p43 | hypothetical protein | phrog_26952 | unknown function | unknown function | -1 | 26772 | 26954 |
| YP_008531943.1 | NC_022342_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24390 | 24749 |
| YP_008531913.1 | NC_022342_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5636 | 6097 |
| YP_008531940.1 | NC_022342_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22523 | 22996 |
| YP_008531950.1 | NC_022342_p44 | hypothetical protein | phrog_7333 | unknown function | unknown function | 1 | 28590 | 28787 |
| YP_008531930.1 | NC_022342_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17659 | 17943 |
| YP_008531912.1 | NC_022342_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4642 | 5592 |
| YP_008531947.1 | NC_022342_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 25958 | 26272 |
| YP_008531942.1 | NC_022342_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23449 | 24390 |
| YP_008531937.1 | NC_022342_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20896 | 21297 |
| YP_008531918.1 | NC_022342_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7816 | 8112 |
| YP_008531928.1 | NC_022342_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16740 | 17252 |
| YP_008531935.1 | NC_022342_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 19784 | 20341 |
| YP_008531909.1 | NC_022342_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1886 | 3211 |
| YP_008531907.1 | NC_022342_p1 | excinuclease | phrog_1897 | terminase small subunit | head and packaging | 1 | 2 | 373 |
| YP_008531919.1 | NC_022342_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8211 | 8498 |
| YP_008531925.1 | NC_022342_p19 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | 1 | 14544 | 15341 |
| YP_008531911.1 | NC_022342_p5 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4084 | 4638 |
| YP_008531922.1 | NC_022342_p16 | protease | phrog_110 | minor tail protein | tail | 1 | 12241 | 13398 |
| YP_008531936.1 | NC_022342_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20388 | 21059 |
| YP_008531910.1 | NC_022342_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3218 | 3973 |
| YP_008531951.1 | NC_022342_p45 | endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 28787 | 29089 |
| YP_008531933.1 | NC_022342_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19336 | 19533 |
| YP_008531920.1 | NC_022342_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8506 | 11271 |
| YP_008531944.1 | NC_022342_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 24855 | 25055 |
| YP_008531914.1 | NC_022342_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6099 | 6446 |
| YP_008531908.1 | NC_022342_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 378 | 1889 |
| YP_008531921.1 | NC_022342_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 11287 | 12234 |
| YP_008531924.1 | NC_022342_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14278 | 14547 |
| YP_008531923.1 | NC_022342_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13406 | 14236 |
| YP_008531945.1 | NC_022342_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25052 | 25279 |
| YP_008531948.1 | NC_022342_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26306 | 26614 |
| YP_008531916.1 | NC_022342_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6740 | 7111 |
| YP_008531929.1 | NC_022342_p23 | sigma factor | phrog_1729 | unknown function | unknown function | -1 | 17257 | 17655 |
| YP_008531946.1 | NC_022342_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25304 | 25837 |
| YP_008531927.1 | NC_022342_p21 | holin | phrog_443 | holin | lysis | 1 | 16259 | 16657 |