Genomic map of Pseudomonas phage MPK6 (NC_022746)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022746
Definition
Pseudomonas phage MPK6, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Krylovirinae; Phikmvvirus; Pseudomonas virus MPK6.
DB of origin
REFSEQ
Length
42957
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
50
%GC
62.27
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008766812.1 NC_022746_p46 holin phrog_6597 holin lysis 1 41193 41393
YP_008766802.1 NC_022746_p36 tail tubular protein B phrog_457 tail protein tail 1 26617 29097
YP_008766808.1 NC_022746_p42 tail fiber protein phrog_4176 tail fiber protein tail 1 37563 38468
YP_008766811.1 NC_022746_p45 terminase large subunit phrog_38 terminase large subunit head and packaging 1 39391 41196
YP_008766777.1 NC_022746_p11 hypothetical protein phrog_5433 unknown function unknown function 1 5121 5540
YP_008766773.1 NC_022746_p7 hypothetical protein phrog_36558 unknown function unknown function 1 3963 4223
YP_008766784.1 NC_022746_p18 hypothetical protein phrog_1614 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 9826 10446
YP_008766799.1 NC_022746_p33 scaffolding protein phrog_1018 head scaffolding protein head and packaging 1 23935 24903
YP_008766774.1 NC_022746_p8 hypothetical protein phrog_4342 unknown function unknown function 1 4223 4513
YP_008766794.1 NC_022746_p28 phage-specific RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 18787 21234
YP_008766776.1 NC_022746_p10 hypothetical protein phrog_4342 unknown function unknown function 1 4749 5042
YP_008766809.1 NC_022746_p43 tail fiber protein phrog_4950 tail fiber protein tail 1 38472 39077
YP_008766814.1 NC_022746_p48 Rz protein phrog_214 Rz-like spanin lysis 1 41830 42159
YP_008766801.1 NC_022746_p35 tail tubular protein A phrog_446 tail protein tail 1 26060 26614
YP_008766782.1 NC_022746_p16 primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 7775 8599
YP_008766790.1 NC_022746_p24 5'-3' exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 15826 16767
YP_008766805.1 NC_022746_p39 internal virion protein phrog_342 internal virion protein with endolysin domain head and packaging 1 32342 36355
YP_008766775.1 NC_022746_p9 hypothetical protein phrog_24541 unknown function unknown function 1 4513 4752
YP_008766779.1 NC_022746_p13 DNA binding domain-containing protein phrog_6982 DNA polymerase DNA, RNA and nucleotide metabolism 1 5971 6780
YP_008766783.1 NC_022746_p17 DNAB helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 8643 9836
YP_008766781.1 NC_022746_p15 hypothetical protein phrog_2563 unknown function unknown function 1 7305 7589
YP_008766789.1 NC_022746_p23 hypothetical protein phrog_862 unknown function unknown function 1 14777 15826
YP_008766778.1 NC_022746_p12 hypothetical protein phrog_6915 unknown function unknown function 1 5609 5968
YP_008766816.1 NC_022746_p50 phage particle protein phrog_6908 minor head protein head and packaging 1 42249 42563
YP_008766772.1 NC_022746_p6 hypothetical protein phrog_7027 unknown function unknown function 1 3560 3784
YP_008766796.1 NC_022746_p30 hypothetical protein phrog_3986 unknown function unknown function 1 21673 22146
YP_008766795.1 NC_022746_p29 hypothetical protein phrog_6575 unknown function unknown function 1 21422 21673
YP_008766797.1 NC_022746_p31 phage particle protein phrog_3112 virion structural protein head and packaging 1 22112 22387
YP_008766770.1 NC_022746_p4 hypothetical protein phrog_1448 unknown function unknown function 1 2298 2837
YP_008766815.1 NC_022746_p49 Rz1 protein phrog_456 Rz-like spanin lysis 1 42047 42247
YP_008766780.1 NC_022746_p14 hypothetical protein phrog_9409 unknown function unknown function 1 6860 7279
YP_008766769.1 NC_022746_p3 hypothetical protein phrog_7124 unknown function unknown function 1 2060 2287
YP_008766803.1 NC_022746_p37 internal virion protein phrog_805 internal virion protein head and packaging 1 29097 29642
YP_008766800.1 NC_022746_p34 major capsid protein phrog_267 major head protein head and packaging 1 24956 25963
YP_008766787.1 NC_022746_p21 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 11988 14414
YP_008766798.1 NC_022746_p32 head-tail connector protein phrog_449 head-tail adaptor connector 1 22399 23931
YP_008766807.1 NC_022746_p41 tail fiber protein phrog_8874 tail fiber protein tail 1 37112 37570
YP_008766788.1 NC_022746_p22 hypothetical protein phrog_5437 unknown function unknown function 1 14411 14722
YP_008766785.1 NC_022746_p19 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 10446 11393
YP_008766810.1 NC_022746_p44 terminase small subunit phrog_891 terminase small subunit head and packaging 1 39077 39382
YP_008766767.1 NC_022746_p1 hypothetical protein phrog_20091 unknown function unknown function 1 1635 1763
YP_008766791.1 NC_022746_p25 endonuclease type 7 phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 16757 17197
YP_008766813.1 NC_022746_p47 endolysin phrog_7 endolysin lysis 1 41390 41872
YP_008766792.1 NC_022746_p26 hypothetical protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 17194 18240
YP_008766786.1 NC_022746_p20 hypothetical protein phrog_7292 unknown function unknown function 1 11671 11991
YP_008766768.1 NC_022746_p2 hypothetical protein phrog_5722 unknown function unknown function 1 1776 2060
YP_008766806.1 NC_022746_p40 phage particle protein phrog_6953 tail fiber protein tail 1 36357 37112
YP_008766771.1 NC_022746_p5 hypothetical protein phrog_6951 unknown function unknown function 1 3205 3573
YP_008766793.1 NC_022746_p27 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 18250 18624
YP_008766804.1 NC_022746_p38 internal virion protein phrog_2083 internal virion lysozyme motif head and packaging 1 29642 32338