| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_022746 |
Definition |
Pseudomonas phage MPK6, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Krylovirinae; Phikmvvirus; Pseudomonas virus MPK6. |
DB of origin |
REFSEQ |
Length |
42957 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
50 |
%GC |
62.27 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008766812.1 | NC_022746_p46 | holin | phrog_6597 | holin | lysis | 1 | 41193 | 41393 |
| YP_008766802.1 | NC_022746_p36 | tail tubular protein B | phrog_457 | tail protein | tail | 1 | 26617 | 29097 |
| YP_008766808.1 | NC_022746_p42 | tail fiber protein | phrog_4176 | tail fiber protein | tail | 1 | 37563 | 38468 |
| YP_008766811.1 | NC_022746_p45 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 39391 | 41196 |
| YP_008766777.1 | NC_022746_p11 | hypothetical protein | phrog_5433 | unknown function | unknown function | 1 | 5121 | 5540 |
| YP_008766773.1 | NC_022746_p7 | hypothetical protein | phrog_36558 | unknown function | unknown function | 1 | 3963 | 4223 |
| YP_008766784.1 | NC_022746_p18 | hypothetical protein | phrog_1614 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | 1 | 9826 | 10446 |
| YP_008766799.1 | NC_022746_p33 | scaffolding protein | phrog_1018 | head scaffolding protein | head and packaging | 1 | 23935 | 24903 |
| YP_008766774.1 | NC_022746_p8 | hypothetical protein | phrog_4342 | unknown function | unknown function | 1 | 4223 | 4513 |
| YP_008766794.1 | NC_022746_p28 | phage-specific RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 18787 | 21234 |
| YP_008766776.1 | NC_022746_p10 | hypothetical protein | phrog_4342 | unknown function | unknown function | 1 | 4749 | 5042 |
| YP_008766809.1 | NC_022746_p43 | tail fiber protein | phrog_4950 | tail fiber protein | tail | 1 | 38472 | 39077 |
| YP_008766814.1 | NC_022746_p48 | Rz protein | phrog_214 | Rz-like spanin | lysis | 1 | 41830 | 42159 |
| YP_008766801.1 | NC_022746_p35 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 26060 | 26614 |
| YP_008766782.1 | NC_022746_p16 | primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 7775 | 8599 |
| YP_008766790.1 | NC_022746_p24 | 5'-3' exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 15826 | 16767 |
| YP_008766805.1 | NC_022746_p39 | internal virion protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 32342 | 36355 |
| YP_008766775.1 | NC_022746_p9 | hypothetical protein | phrog_24541 | unknown function | unknown function | 1 | 4513 | 4752 |
| YP_008766779.1 | NC_022746_p13 | DNA binding domain-containing protein | phrog_6982 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 5971 | 6780 |
| YP_008766783.1 | NC_022746_p17 | DNAB helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 8643 | 9836 |
| YP_008766781.1 | NC_022746_p15 | hypothetical protein | phrog_2563 | unknown function | unknown function | 1 | 7305 | 7589 |
| YP_008766789.1 | NC_022746_p23 | hypothetical protein | phrog_862 | unknown function | unknown function | 1 | 14777 | 15826 |
| YP_008766778.1 | NC_022746_p12 | hypothetical protein | phrog_6915 | unknown function | unknown function | 1 | 5609 | 5968 |
| YP_008766816.1 | NC_022746_p50 | phage particle protein | phrog_6908 | minor head protein | head and packaging | 1 | 42249 | 42563 |
| YP_008766772.1 | NC_022746_p6 | hypothetical protein | phrog_7027 | unknown function | unknown function | 1 | 3560 | 3784 |
| YP_008766796.1 | NC_022746_p30 | hypothetical protein | phrog_3986 | unknown function | unknown function | 1 | 21673 | 22146 |
| YP_008766795.1 | NC_022746_p29 | hypothetical protein | phrog_6575 | unknown function | unknown function | 1 | 21422 | 21673 |
| YP_008766797.1 | NC_022746_p31 | phage particle protein | phrog_3112 | virion structural protein | head and packaging | 1 | 22112 | 22387 |
| YP_008766770.1 | NC_022746_p4 | hypothetical protein | phrog_1448 | unknown function | unknown function | 1 | 2298 | 2837 |
| YP_008766815.1 | NC_022746_p49 | Rz1 protein | phrog_456 | Rz-like spanin | lysis | 1 | 42047 | 42247 |
| YP_008766780.1 | NC_022746_p14 | hypothetical protein | phrog_9409 | unknown function | unknown function | 1 | 6860 | 7279 |
| YP_008766769.1 | NC_022746_p3 | hypothetical protein | phrog_7124 | unknown function | unknown function | 1 | 2060 | 2287 |
| YP_008766803.1 | NC_022746_p37 | internal virion protein | phrog_805 | internal virion protein | head and packaging | 1 | 29097 | 29642 |
| YP_008766800.1 | NC_022746_p34 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 24956 | 25963 |
| YP_008766787.1 | NC_022746_p21 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 11988 | 14414 |
| YP_008766798.1 | NC_022746_p32 | head-tail connector protein | phrog_449 | head-tail adaptor | connector | 1 | 22399 | 23931 |
| YP_008766807.1 | NC_022746_p41 | tail fiber protein | phrog_8874 | tail fiber protein | tail | 1 | 37112 | 37570 |
| YP_008766788.1 | NC_022746_p22 | hypothetical protein | phrog_5437 | unknown function | unknown function | 1 | 14411 | 14722 |
| YP_008766785.1 | NC_022746_p19 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 10446 | 11393 |
| YP_008766810.1 | NC_022746_p44 | terminase small subunit | phrog_891 | terminase small subunit | head and packaging | 1 | 39077 | 39382 |
| YP_008766767.1 | NC_022746_p1 | hypothetical protein | phrog_20091 | unknown function | unknown function | 1 | 1635 | 1763 |
| YP_008766791.1 | NC_022746_p25 | endonuclease type 7 | phrog_423 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 16757 | 17197 |
| YP_008766813.1 | NC_022746_p47 | endolysin | phrog_7 | endolysin | lysis | 1 | 41390 | 41872 |
| YP_008766792.1 | NC_022746_p26 | hypothetical protein | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 17194 | 18240 |
| YP_008766786.1 | NC_022746_p20 | hypothetical protein | phrog_7292 | unknown function | unknown function | 1 | 11671 | 11991 |
| YP_008766768.1 | NC_022746_p2 | hypothetical protein | phrog_5722 | unknown function | unknown function | 1 | 1776 | 2060 |
| YP_008766806.1 | NC_022746_p40 | phage particle protein | phrog_6953 | tail fiber protein | tail | 1 | 36357 | 37112 |
| YP_008766771.1 | NC_022746_p5 | hypothetical protein | phrog_6951 | unknown function | unknown function | 1 | 3205 | 3573 |
| YP_008766793.1 | NC_022746_p27 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 18250 | 18624 |
| YP_008766804.1 | NC_022746_p38 | internal virion protein | phrog_2083 | internal virion lysozyme motif | head and packaging | 1 | 29642 | 32338 |