| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_022750 |
Definition |
Enterobacteria phage fiAA91-ss, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Peduovirus; Escherichia virus fiAA91ss. |
DB of origin |
REFSEQ |
Length |
33628 |
Host Name |
Shigella sonnei |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
40 |
%GC |
51.9 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008766937.1 | NC_022750_p19 | tail fiber assembly | phrog_136 | tail fiber assembly protein | tail | 1 | 13944 | 14471 |
| YP_008766938.1 | NC_022750_p20 | hypothetical protein | phrog_15126 | unknown function | unknown function | -1 | 14571 | 15677 |
| YP_008766948.1 | NC_022750_p30 | IS21 transposase | phrog_1157 | transposase | integration and excision | 1 | 24553 | 25725 |
| YP_008766956.1 | NC_022750_p38 | cytolethal distending toxin V C subunit | phrog_6561 | cytolethal distending toxin C subunit | moron, auxiliary metabolic gene and host takeover | -1 | 30877 | 31422 |
| YP_008766939.1 | NC_022750_p21 | major tail sheath | phrog_23 | tail sheath | tail | 1 | 15979 | 17169 |
| YP_008766943.1 | NC_022750_p25 | tail protein | phrog_76 | tail protein | tail | 1 | 20639 | 21118 |
| YP_008766947.1 | NC_022750_p29 | immunity repressor | phrog_147 | transcriptional regulator | transcription regulation | -1 | 23903 | 24196 |
| YP_008766940.1 | NC_022750_p22 | major tail tube | phrog_55 | head closure | connector | 1 | 17182 | 17700 |
| YP_008766942.1 | NC_022750_p24 | tail length determinator | phrog_28 | tail length tape measure protein | tail | 1 | 18177 | 20624 |
| YP_008766953.1 | NC_022750_p35 | zinc finger protein | phrog_54 | DksA-like zinc-finger protein | other | 1 | 28018 | 28242 |
| YP_008766946.1 | NC_022750_p28 | integrase | phrog_1 | integrase | integration and excision | -1 | 22853 | 23863 |
| YP_008766950.1 | NC_022750_p32 | DNA replication protein | phrog_235 | unknown function | unknown function | 1 | 26922 | 27428 |
| YP_008766925.1 | NC_022750_p7 | tail protein | phrog_46 | baseplate hub | tail | 1 | 6511 | 6714 |
| YP_008766919.1 | NC_022750_p1 | capsid portal protein | phrog_68 | portal protein | head and packaging | -1 | 189 | 1223 |
| YP_008766951.1 | NC_022750_p33 | hypothetical protein | phrog_128 | unknown function | unknown function | 1 | 27492 | 27716 |
| YP_008766921.1 | NC_022750_p3 | capsid scaffold | phrog_73 | head scaffolding protein | head and packaging | 1 | 3169 | 4023 |
| YP_008766944.1 | NC_022750_p26 | phage control protein D | phrog_52 | tail protein | tail | 1 | 21118 | 22281 |
| YP_008766923.1 | NC_022750_p5 | small terminase subunit | phrog_74 | terminase small subunit | head and packaging | 1 | 5159 | 5902 |
| YP_008766952.1 | NC_022750_p34 | hypothetical protein | phrog_265 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 27716 | 28018 |
| YP_008766927.1 | NC_022750_p9 | lysozyme | phrog_90 | endolysin | lysis | 1 | 6999 | 7496 |
| YP_008766924.1 | NC_022750_p6 | capsid completion protein | phrog_71 | head-tail adaptor Ad1 | connector | 1 | 6002 | 6511 |
| YP_008766945.1 | NC_022750_p27 | activator of late transcription | phrog_603 | transcriptional regulator | transcription regulation | 1 | 22362 | 22580 |
| YP_008766935.1 | NC_022750_p17 | baseplate assembly | phrog_48 | tail protein | tail | 1 | 11321 | 11851 |
| YP_008766920.1 | NC_022750_p2 | large terminase subunit | phrog_2 | terminase large subunit | head and packaging | -1 | 1223 | 2995 |
| YP_008766930.1 | NC_022750_p12 | tail completion protein | phrog_65 | tail terminator | connector | 1 | 8454 | 8924 |
| YP_008766928.1 | NC_022750_p10 | lysin | phrog_162 | endolysin | lysis | 1 | 7511 | 7936 |
| YP_008766955.1 | NC_022750_p37 | DNA replication | phrog_91 | nicking at origin of replication | DNA, RNA and nucleotide metabolism | 1 | 28504 | 30801 |
| YP_008766934.1 | NC_022750_p16 | baseplate assembly | phrog_6 | baseplate wedge subunit | tail | 1 | 10420 | 11328 |
| YP_008766957.1 | NC_022750_p39 | cytolethal distending toxin V B subunit | phrog_5985 | cytolethal distending toxin B subunit | moron, auxiliary metabolic gene and host takeover | -1 | 31437 | 32246 |
| YP_008766922.1 | NC_022750_p4 | major capsid protein precursor | phrog_70 | major head protein | head and packaging | 1 | 4082 | 5155 |
| YP_008766954.1 | NC_022750_p36 | replication initiation protein | phrog_154 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 28239 | 28514 |
| YP_008766932.1 | NC_022750_p14 | baseplate protein | phrog_11 | baseplate spike | tail | 1 | 9436 | 10071 |
| YP_008766936.1 | NC_022750_p18 | tail fiber | phrog_381 | tail fiber protein | tail | 1 | 11862 | 13940 |
| YP_008766949.1 | NC_022750_p31 | IS21 transposition protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 25725 | 26522 |
| YP_008766929.1 | NC_022750_p11 | lysin | phrog_89 | Rz-like spanin | lysis | 1 | 7924 | 8349 |
| YP_008766926.1 | NC_022750_p8 | holin | phrog_175 | holin | lysis | 1 | 6718 | 6999 |
| YP_008766941.1 | NC_022750_p23 | tail protein | phrog_103 | tail protein | tail | 1 | 17757 | 18032 |
| YP_008766931.1 | NC_022750_p13 | tail completion protein | phrog_26 | tail completion or Neck1 protein | connector | 1 | 8917 | 9369 |
| YP_008766933.1 | NC_022750_p15 | baseplate protein | phrog_43 | baseplate wedge subunit | tail | 1 | 10068 | 10415 |
| YP_008766958.1 | NC_022750_p40 | cytolethal distending toxin V A subunit | phrog_9137 | cytolethal distending toxin A subunit | moron, auxiliary metabolic gene and host takeover | -1 | 32243 | 33019 |