Genomic map of Cyanophage PP (NC_022751)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022751
Definition
Cyanophage PP, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Caudovirales; Podoviridae.
DB of origin
REFSEQ
Length
42480
Host Name
Plectonema boryanum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
41
%GC
46.4
Number of singletons
6
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008766996.1 NC_022751_p38 hypothetical protein phrog_37152 unknown function unknown function -1 40307 40807
YP_008766997.1 NC_022751_p39 hypothetical protein phrog_37501 unknown function unknown function -1 40813 41298
YP_008766989.1 NC_022751_p31 tail tube A phrog_10775 tail protein tail -1 33108 33773
YP_008766963.1 NC_022751_p5 hypothetical protein phrog_33146 unknown function unknown function 1 1949 3202
YP_008766960.1 NC_022751_p2 hypothetical protein phrog_37788 unknown function unknown function 1 774 1334
YP_008766974.1 NC_022751_p16 hypothetical protein phrog_32411 unknown function unknown function 1 11497 11742
YP_008766984.1 NC_022751_p26 tail protein phrog_33290 ParB-like partition nuclease DNA, RNA and nucleotide metabolism -1 20299 25437
YP_008766987.1 NC_022751_p29 tail tube B phrog_21185 tail protein tail -1 29665 32748
YP_008766961.1 NC_022751_p3 hypothetical protein singleton unknown function unknown function 1 1331 1567
YP_008766983.1 NC_022751_p25 tail fiber phrog_19395 tail fiber protein; host specificity tail -1 16740 20201
YP_008766982.1 NC_022751_p24 tail fiber phrog_22682 tail fiber protein tail -1 15551 16753
YP_008766999.1 NC_022751_p41 hypothetical protein phrog_32491 unknown function unknown function -1 41599 41850
YP_008766992.1 NC_022751_p34 scaffolding protein phrog_19777 head scaffolding protein head and packaging -1 35384 36067
YP_008766979.1 NC_022751_p21 hypothetical protein singleton unknown function unknown function 1 14038 14247
YP_008766971.1 NC_022751_p13 hypothetical protein phrog_37438 unknown function unknown function 1 9089 9295
YP_008766972.1 NC_022751_p14 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 9299 11167
YP_008766988.1 NC_022751_p30 recombination endonuclease VII phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism -1 32738 33103
YP_008766968.1 NC_022751_p10 hypothetical protein phrog_29046 unknown function unknown function 1 5377 6636
YP_008766993.1 NC_022751_p35 portal protein phrog_332 head-tail adaptor connector -1 36072 38027
YP_008766975.1 NC_022751_p17 hypothetical protein phrog_31336 unknown function unknown function 1 11826 12788
YP_008766995.1 NC_022751_p37 terminase phrog_38 terminase large subunit head and packaging -1 38504 40201
YP_008766962.1 NC_022751_p4 hypothetical protein phrog_33605 unknown function unknown function 1 1545 1748
YP_008766978.1 NC_022751_p20 ERF family protein phrog_2324 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 13522 14025
YP_008766990.1 NC_022751_p32 hypothetical protein singleton unknown function unknown function -1 34050 34166
YP_008766998.1 NC_022751_p40 hypothetical protein phrog_29870 unknown function unknown function -1 41319 41594
YP_008766976.1 NC_022751_p18 hypothetical protein singleton unknown function unknown function 1 13017 13193
YP_008766994.1 NC_022751_p36 DNA endonuclease phrog_5046 HNH endonuclease DNA, RNA and nucleotide metabolism -1 38042 38467
YP_008766977.1 NC_022751_p19 hypothetical protein phrog_33364 unknown function unknown function 1 13272 13514
YP_008766966.1 NC_022751_p8 hypothetical protein phrog_37564 unknown function unknown function 1 4624 5133
YP_008766970.1 NC_022751_p12 hypothetical protein phrog_35193 unknown function unknown function 1 8876 9076
YP_008766965.1 NC_022751_p7 hypothetical protein phrog_36145 unknown function unknown function 1 3956 4624
YP_008766986.1 NC_022751_p28 internal protein phrog_35077 unknown function unknown function -1 28471 29661
YP_008766991.1 NC_022751_p33 capsid protein phrog_267 major head protein head and packaging -1 34216 35361
YP_008766959.1 NC_022751_p1 hypothetical protein singleton unknown function unknown function 1 419 685
YP_008766964.1 NC_022751_p6 hypothetical protein phrog_36294 unknown function unknown function 1 3292 3837
YP_008766967.1 NC_022751_p9 hypothetical protein singleton unknown function unknown function 1 5078 5371
YP_008766981.1 NC_022751_p23 hypothetical protein phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism 1 14627 15487
YP_008766969.1 NC_022751_p11 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 6641 8815
YP_008766980.1 NC_022751_p22 hypothetical protein phrog_38676 unknown function unknown function 1 14210 14548
YP_008766973.1 NC_022751_p15 hypothetical protein phrog_28195 unknown function unknown function 1 11149 11304
YP_008766985.1 NC_022751_p27 endopeptidase phrog_21656 peptidase other -1 25485 28469