Genomic map of Salmonella phage SETP7 (NC_022754)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022754
Definition
Salmonella phage SETP7, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Jerseyvirus.
DB of origin
REFSEQ
Length
42749
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
67
%GC
49.9
Number of singletons
2
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008767173.1 NC_022754_p2 phage terminase large subunit phrog_2 terminase large subunit head and packaging 1 536 1807
YP_008767206.1 NC_022754_p35 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 26533 26820
YP_008767194.1 NC_022754_p23 hypothetical protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover -1 14114 14293
YP_008767183.1 NC_022754_p12 head protein phrog_4366 head fiber protein head and packaging 1 8334 8618
YP_008767202.1 NC_022754_p31 tailspike protein phrog_1819 tail spike protein tail 1 21508 23562
YP_008767172.1 NC_022754_p1 phage terminase small subunit phrog_3064 terminase head and packaging 1 40 546
YP_008767201.1 NC_022754_p30 tail fiber protein phrog_469 tail protein tail 1 18937 21495
YP_008767215.1 NC_022754_p44 EaA protein phrog_60 unknown function unknown function -1 33340 33747
YP_008767186.1 NC_022754_p15 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 9209 9718
YP_008767213.1 NC_022754_p42 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 32460 32960
YP_008767198.1 NC_022754_p27 hypothetical protein phrog_384 virion structural protein head and packaging 1 17572 18072
YP_008767216.1 NC_022754_p45 primase/helicase protein phrog_3228 replicative helicase-primase DNA, RNA and nucleotide metabolism -1 33744 35930
YP_008767174.1 NC_022754_p3 portal protein phrog_145 portal protein head and packaging 1 1820 3289
YP_008767204.1 NC_022754_p33 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 23848 26229
YP_008767226.1 NC_022754_p55 hypothetical protein phrog_4947 unknown function unknown function 1 38433 38798
YP_008767188.1 NC_022754_p17 hypothetical protein phrog_161 head closure Hc1 connector 1 10326 10685
YP_008767181.1 NC_022754_p10 scaffold protein phrog_206 head scaffolding protein head and packaging 1 6519 7220
YP_008767219.1 NC_022754_p48 hypothetical protein singleton unknown function unknown function -1 36511 36657
YP_008767211.1 NC_022754_p40 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 30478 31902
YP_008767205.1 NC_022754_p34 hypothetical protein phrog_4879 unknown function unknown function -1 26310 26501
YP_008767184.1 NC_022754_p13 major tail protein phrog_4069 Hoc-like head decoration head and packaging 1 8630 8980
YP_008767237.1 NC_022754_p66 hypothetical protein phrog_2531 unknown function unknown function 1 42133 42411
YP_008767182.1 NC_022754_p11 major capsid protein phrog_247 major head protein head and packaging 1 7224 8273
YP_008767176.1 NC_022754_p5 head morphogenesis protein phrog_241 head morphogenesis head and packaging 1 4116 5159
YP_008767191.1 NC_022754_p20 tail protein phrog_290 minor tail protein tail 1 11496 12665
YP_008767220.1 NC_022754_p49 hypothetical protein phrog_12538 unknown function unknown function 1 36845 37048
YP_008767223.1 NC_022754_p52 hypothetical protein phrog_6094 unknown function unknown function 1 37715 38059
YP_008767217.1 NC_022754_p46 hypothetical protein phrog_5169 unknown function unknown function -1 35988 36221
YP_008767187.1 NC_022754_p16 neck protein phrog_3614 unknown function unknown function 1 9721 10326
YP_008767189.1 NC_022754_p18 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 10682 11077
YP_008767212.1 NC_022754_p41 hypothetical protein phrog_3127 unknown function unknown function -1 31944 32456
YP_008767175.1 NC_022754_p4 hypothetical protein phrog_6095 amidase lysis -1 3320 3973
YP_008767227.1 NC_022754_p56 hypothetical protein phrog_1040 peptidase HslV family other 1 38804 39238
YP_008767209.1 NC_022754_p38 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 27511 29712
YP_008767179.1 NC_022754_p8 spanin protein phrog_2536 Rz-like spanin lysis 1 5939 6325
YP_008767218.1 NC_022754_p47 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision -1 36218 36388
YP_008767200.1 NC_022754_p29 hypothetical protein phrog_329 minor tail protein tail 1 18581 18946
YP_008767221.1 NC_022754_p50 hypothetical protein phrog_18511 unknown function unknown function 1 37305 37490
YP_008767233.1 NC_022754_p62 hypothetical protein phrog_2180 unknown function unknown function 1 41270 41455
YP_008767224.1 NC_022754_p53 hypothetical protein singleton unknown function unknown function 1 38084 38236
YP_008767225.1 NC_022754_p54 hypothetical protein phrog_3766 unknown function unknown function 1 38233 38436
YP_008767232.1 NC_022754_p61 hypothetical protein phrog_27442 unknown function unknown function 1 41070 41264
YP_008767178.1 NC_022754_p7 hypothetical protein phrog_14923 unknown function unknown function 1 5775 5894
YP_008767229.1 NC_022754_p58 class I holin phrog_2508 holin lysis 1 39601 39891
YP_008767197.1 NC_022754_p26 tail tape measure protein phrog_1538 tail length tape measure protein tail 1 15237 17570
YP_008767207.1 NC_022754_p36 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 26810 27307
YP_008767235.1 NC_022754_p64 hypothetical protein phrog_4684 unknown function unknown function 1 41607 41762
YP_008767238.1 NC_022754_p67 hypothetical protein phrog_10134 unknown function unknown function 1 42425 42655
YP_008767208.1 NC_022754_p37 hypothetical protein phrog_10404 unknown function unknown function -1 27390 27521
YP_008767234.1 NC_022754_p63 hypothetical protein phrog_3002 unknown function unknown function 1 41452 41610
YP_008767177.1 NC_022754_p6 tail protein phrog_3945 Hoc-like head decoration head and packaging 1 5162 5620
YP_008767193.1 NC_022754_p22 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism -1 12921 14051
YP_008767210.1 NC_022754_p39 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 29770 30396
YP_008767214.1 NC_022754_p43 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 33093 33311
YP_008767228.1 NC_022754_p57 hypothetical protein phrog_2359 holin lysis 1 39318 39599
YP_008767236.1 NC_022754_p65 hypothetical protein phrog_268 unknown function unknown function 1 41759 42115
YP_008767180.1 NC_022754_p9 spanin protein phrog_5672 Rz-like spanin lysis 1 6291 6434
YP_008767185.1 NC_022754_p14 hypothetical protein phrog_4451 unknown function unknown function 1 9017 9205
YP_008767203.1 NC_022754_p32 hypothetical protein phrog_5915 unknown function unknown function -1 23681 23851
YP_008767196.1 NC_022754_p25 hypothetical protein phrog_4557 unknown function unknown function 1 14885 15244
YP_008767231.1 NC_022754_p60 endolysin phrog_7 endolysin lysis 1 40401 40883
YP_008767222.1 NC_022754_p51 hypothetical protein phrog_9384 unknown function unknown function 1 37487 37651
YP_008767230.1 NC_022754_p59 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 40085 40414
YP_008767199.1 NC_022754_p28 hypothetical protein phrog_396 minor tail protein tail 1 18069 18584
YP_008767190.1 NC_022754_p19 hypothetical protein phrog_179 tail terminator connector 1 11077 11496
YP_008767195.1 NC_022754_p24 hypothetical protein phrog_313 Tail assembly chaperone tail 1 14463 14879
YP_008767192.1 NC_022754_p21 hypothetical protein phrog_2452 unknown function unknown function -1 12694 12924