Genomic map of Bacillus virus Riggi (NC_022765)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022765
Definition
Bacillus phage Riggi, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Andromedavirus.
DB of origin
REFSEQ
Length
49836
Host Name
Bacillus pumilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
79
%GC
41.45
Number of singletons
2
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008770614.1 NC_022765_p57 hypothetical protein phrog_10817 unknown function unknown function 1 39442 39858
YP_008770632.1 NC_022765_p75 Holliday junction resolvase phrog_9019 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 47938 48420
YP_008770603.1 NC_022765_p46 hypothetical protein phrog_6833 unknown function unknown function 1 34620 34859
YP_008770622.1 NC_022765_p65 hypothetical protein phrog_12326 unknown function unknown function 1 42252 42677
YP_008770602.1 NC_022765_p45 RNA polymerase sigma-70 factor phrog_1740 RNA polymerase sigma factor transcription regulation 1 33943 34623
YP_008770579.1 NC_022765_p22 hypothetical protein phrog_12043 unknown function unknown function 1 13109 13285
YP_008770577.1 NC_022765_p20 tail completion and head joining protein phrog_26 tail completion or Neck1 protein connector 1 12209 12667
YP_008770572.1 NC_022765_p15 scaffold protein phrog_976 head maturation protease head and packaging 1 9162 10199
YP_008770560.1 NC_022765_p3 hypothetical protein phrog_11595 unknown function unknown function -1 1324 1554
YP_008770597.1 NC_022765_p40 hypothetical protein phrog_11036 unknown function unknown function 1 28763 29125
YP_008770583.1 NC_022765_p26 tape measure protein phrog_58 tail length tape measure protein tail 1 14849 17341
YP_008770562.1 NC_022765_p5 hypothetical protein singleton unknown function unknown function -1 2051 2200
YP_008770595.1 NC_022765_p38 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 26486 27763
YP_008770609.1 NC_022765_p52 hypothetical protein phrog_10941 unknown function unknown function 1 36746 37060
YP_008770613.1 NC_022765_p56 hypothetical protein phrog_1905 unknown function unknown function 1 39039 39470
YP_008770610.1 NC_022765_p53 deoxynucleoside monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other 1 37061 37645
YP_008770607.1 NC_022765_p50 hypothetical protein phrog_11297 unknown function unknown function 1 36022 36189
YP_008770636.1 NC_022765_p79 hypothetical protein phrog_6177 unknown function unknown function 1 49072 49746
YP_008770606.1 NC_022765_p49 cysteine-rich zinc finger protein phrog_8897 unknown function unknown function 1 35672 36025
YP_008770625.1 NC_022765_p68 hypothetical protein phrog_5422 unknown function unknown function 1 44733 45146
YP_008770605.1 NC_022765_p48 hypothetical protein phrog_25869 unknown function unknown function 1 35566 35658
YP_008770568.1 NC_022765_p11 portal phrog_113 portal protein head and packaging 1 6012 7331
YP_008770629.1 NC_022765_p72 hypothetical protein phrog_37197 unknown function unknown function -1 46685 47185
YP_008770599.1 NC_022765_p42 DNA polymerase III phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 29466 32546
YP_008770627.1 NC_022765_p70 hypothetical protein phrog_10908 unknown function unknown function -1 45442 45933
YP_008770594.1 NC_022765_p37 hypothetical protein phrog_11082 unknown function unknown function 1 26140 26493
YP_008770633.1 NC_022765_p76 hypothetical protein singleton unknown function unknown function 1 48425 48586
YP_008770635.1 NC_022765_p78 hypothetical protein phrog_24615 unknown function unknown function 1 48728 48907
YP_008770574.1 NC_022765_p17 major capsid protein phrog_1650 major head protein head and packaging 1 10640 11521
YP_008770585.1 NC_022765_p28 hypothetical protein phrog_11128 unknown function unknown function 1 19404 19703
YP_008770626.1 NC_022765_p69 hypothetical protein phrog_8966 unknown function unknown function 1 45219 45422
YP_008770616.1 NC_022765_p59 hypothetical protein phrog_10351 unknown function unknown function 1 40320 40541
YP_008770618.1 NC_022765_p61 hypothetical protein phrog_4224 unknown function unknown function 1 40878 41186
YP_008770630.1 NC_022765_p73 hypothetical protein phrog_17250 unknown function unknown function -1 47182 47385
YP_008770628.1 NC_022765_p71 DNA polymerase III epsilon subunit phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 46095 46685
YP_008770571.1 NC_022765_p14 hypothetical protein phrog_15889 unknown function unknown function -1 8799 8921
YP_008770561.1 NC_022765_p4 hypothetical protein phrog_16606 unknown function unknown function -1 1551 1862
YP_008770612.1 NC_022765_p55 serine/threonine kinase phrog_11167 serine-threonine kinase other 1 38224 39042
YP_008770590.1 NC_022765_p33 endolysin phrog_2742 endolysin lysis 1 23330 24241
YP_008770589.1 NC_022765_p32 phosphodiesterase phrog_1625 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 22855 23316
YP_008770563.1 NC_022765_p6 hypothetical protein phrog_10975 unknown function unknown function -1 2275 2604
YP_008770604.1 NC_022765_p47 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 34859 35569
YP_008770631.1 NC_022765_p74 hypothetical protein phrog_27458 unknown function unknown function -1 47388 47546
YP_008770598.1 NC_022765_p41 transcriptional regulator phrog_9217 transcriptional regulator transcription regulation 1 29118 29453
YP_008770619.1 NC_022765_p62 hypothetical protein phrog_8287 unknown function unknown function 1 41186 41617
YP_008770564.1 NC_022765_p7 hypothetical protein phrog_30371 unknown function unknown function -1 2711 3220
YP_008770573.1 NC_022765_p16 hypothetical protein phrog_8960 head scaffolding protein head and packaging 1 10199 10621
YP_008770600.1 NC_022765_p43 PD-(D/E)XK nuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 32549 33394
YP_008770567.1 NC_022765_p10 terminase large subunit phrog_675 terminase large subunit head and packaging 1 4244 5929
YP_008770608.1 NC_022765_p51 hypothetical protein phrog_11513 DNA binding protein DNA, RNA and nucleotide metabolism 1 36493 36756
YP_008770569.1 NC_022765_p12 minor head protein phrog_3517 head morphogenesis head and packaging 1 7385 8287
YP_008770581.1 NC_022765_p24 hypothetical protein phrog_9046 unknown function unknown function 1 14249 14599
YP_008770592.1 NC_022765_p35 hypothetical protein phrog_11024 holin lysis 1 24712 25077
YP_008770558.1 NC_022765_p1 hypothetical protein phrog_6177 unknown function unknown function 1 65 739
YP_008770591.1 NC_022765_p34 holin phrog_9987 holin lysis 1 24327 24536
YP_008770624.1 NC_022765_p67 plasmid replication-relaxation protein phrog_2190 replication initiation protein DNA, RNA and nucleotide metabolism 1 44169 44720
YP_008770565.1 NC_022765_p8 hypothetical protein phrog_18405 unknown function unknown function -1 3217 3444
YP_008770611.1 NC_022765_p54 hypothetical protein phrog_11220 unknown function unknown function 1 37645 38085
YP_008770588.1 NC_022765_p31 hypothetical protein phrog_26792 unknown function unknown function 1 22296 22883
YP_008770620.1 NC_022765_p63 hypothetical protein phrog_26074 unknown function unknown function 1 41619 41771
YP_008770623.1 NC_022765_p66 FtsK/SpoIIIE family protein phrog_1358 FtsK/SpoIIIE-like protein moron, auxiliary metabolic gene and host takeover 1 42893 44182
YP_008770601.1 NC_022765_p44 endonuclease phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 33391 33897
YP_008770584.1 NC_022765_p27 structural protein phrog_10519 virion structural protein head and packaging 1 17355 19397
YP_008770582.1 NC_022765_p25 hypothetical protein phrog_9001 tail assembly chaperone tail 1 14620 14844
YP_008770578.1 NC_022765_p21 hypothetical protein phrog_8346 unknown function unknown function 1 12664 13098
YP_008770580.1 NC_022765_p23 hypothetical protein phrog_290 minor tail protein tail 1 13285 14223
YP_008770596.1 NC_022765_p39 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 27756 28766
YP_008770559.1 NC_022765_p2 hypothetical protein phrog_25154 unknown function unknown function -1 1042 1260
YP_008770617.1 NC_022765_p60 hypothetical protein phrog_10242 unknown function unknown function 1 40556 40885
YP_008770575.1 NC_022765_p18 hypothetical protein phrog_6865 unknown function unknown function 1 11592 11798
YP_008770576.1 NC_022765_p19 hypothetical protein phrog_195 head-tail adaptor connector 1 11812 12204
YP_008770566.1 NC_022765_p9 acetyltransferase phrog_1384 Mom-like DNA modification protein other -1 3514 4155
YP_008770621.1 NC_022765_p64 hypothetical protein phrog_15973 unknown function unknown function 1 41873 42157
YP_008770587.1 NC_022765_p30 hypothetical protein phrog_1887 tail protein tail 1 21343 22299
YP_008770615.1 NC_022765_p58 hypothetical protein phrog_4224 unknown function unknown function 1 39973 40320
YP_008770570.1 NC_022765_p13 hypothetical protein phrog_11369 unknown function unknown function -1 8320 8802
YP_008770586.1 NC_022765_p29 tailspike phrog_2234 tail spike protein tail 1 19703 21334
YP_008770593.1 NC_022765_p36 hypothetical protein phrog_8542 unknown function unknown function 1 25241 26134
YP_008770634.1 NC_022765_p77 hypothetical protein phrog_9356 unknown function unknown function 1 48598 48750