| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_022766 |
Definition |
Bacillus phage Glittering, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Andromedavirus. |
DB of origin |
REFSEQ |
Length |
49246 |
Host Name |
Bacillus pumilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
78 |
%GC |
42.05 |
Number of singletons |
2 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008770696.1 | NC_022766_p60 | hypothetical protein | phrog_4224 | unknown function | unknown function | 1 | 39851 | 40159 |
| YP_008770659.1 | NC_022766_p23 | hypothetical protein | phrog_9046 | unknown function | unknown function | 1 | 13197 | 13538 |
| YP_008770660.1 | NC_022766_p24 | hypothetical protein | phrog_9001 | tail assembly chaperone | tail | 1 | 13583 | 13780 |
| YP_008770647.1 | NC_022766_p11 | hypothetical protein | phrog_11369 | unknown function | unknown function | -1 | 7299 | 7769 |
| YP_008770692.1 | NC_022766_p56 | hypothetical protein | phrog_10817 | unknown function | unknown function | 1 | 38430 | 38846 |
| YP_008770666.1 | NC_022766_p30 | hypothetical protein | phrog_12764 | unknown function | unknown function | 1 | 21551 | 21802 |
| YP_008770670.1 | NC_022766_p34 | hypothetical protein | phrog_11024 | holin | lysis | 1 | 23613 | 23978 |
| YP_008770698.1 | NC_022766_p62 | hypothetical protein | phrog_26074 | unknown function | unknown function | 1 | 40592 | 40744 |
| YP_008770682.1 | NC_022766_p46 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 33792 | 34502 |
| YP_008770695.1 | NC_022766_p59 | hypothetical protein | phrog_10242 | unknown function | unknown function | 1 | 39535 | 39849 |
| YP_008770697.1 | NC_022766_p61 | hypothetical protein | phrog_8287 | unknown function | unknown function | 1 | 40159 | 40590 |
| YP_008770640.1 | NC_022766_p4 | hypothetical protein | phrog_18527 | unknown function | unknown function | -1 | 1656 | 1958 |
| YP_008770676.1 | NC_022766_p40 | transcriptional repressor | phrog_9217 | transcriptional regulator | transcription regulation | 1 | 28027 | 28365 |
| YP_008770645.1 | NC_022766_p9 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 4994 | 6310 |
| YP_008770668.1 | NC_022766_p32 | endolysin | phrog_2742 | endolysin | lysis | 1 | 22246 | 23145 |
| YP_008770683.1 | NC_022766_p47 | cysteine-rich domain contining protein | phrog_8897 | unknown function | unknown function | 1 | 34683 | 35117 |
| YP_008770671.1 | NC_022766_p35 | hypothetical protein | phrog_8542 | unknown function | unknown function | 1 | 24150 | 25043 |
| YP_008770672.1 | NC_022766_p36 | hypothetical protein | phrog_11082 | unknown function | unknown function | 1 | 25049 | 25402 |
| YP_008770664.1 | NC_022766_p28 | tailspike protein | phrog_2234 | tail spike protein | tail | 1 | 18924 | 20591 |
| YP_008770691.1 | NC_022766_p55 | hypothetical protein | phrog_1905 | unknown function | unknown function | 1 | 38027 | 38458 |
| YP_008770673.1 | NC_022766_p37 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 25323 | 26672 |
| YP_008770702.1 | NC_022766_p66 | plasmid relaxation/replication protein | phrog_2190 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 43153 | 43704 |
| YP_008770711.1 | NC_022766_p75 | hypothetical protein | phrog_22357 | unknown function | unknown function | 1 | 47630 | 47791 |
| YP_008770714.1 | NC_022766_p78 | hypothetical protein | phrog_6177 | unknown function | unknown function | 1 | 48460 | 49134 |
| YP_008770705.1 | NC_022766_p69 | hypothetical protein | phrog_10908 | unknown function | unknown function | -1 | 44423 | 44911 |
| YP_008770701.1 | NC_022766_p65 | FtsK/SpoIIIE protein | phrog_1358 | FtsK/SpoIIIE-like protein | moron, auxiliary metabolic gene and host takeover | 1 | 41877 | 43166 |
| YP_008770675.1 | NC_022766_p39 | hypothetical protein | phrog_11036 | unknown function | unknown function | 1 | 27672 | 28025 |
| YP_008770663.1 | NC_022766_p27 | hypothetical protein | phrog_11128 | unknown function | unknown function | 1 | 18624 | 18923 |
| YP_008770679.1 | NC_022766_p43 | endonuclease | phrog_190 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 32315 | 32806 |
| YP_008770674.1 | NC_022766_p38 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 26665 | 27675 |
| YP_008770713.1 | NC_022766_p77 | hypothetical protein | phrog_9356 | unknown function | unknown function | 1 | 47976 | 48128 |
| YP_008770653.1 | NC_022766_p17 | hypothetical protein | phrog_6865 | unknown function | unknown function | 1 | 10546 | 10767 |
| YP_008770694.1 | NC_022766_p58 | hypothetical protein | phrog_10351 | unknown function | unknown function | 1 | 39301 | 39534 |
| YP_008770712.1 | NC_022766_p76 | hypothetical protein | phrog_13978 | unknown function | unknown function | 1 | 47784 | 47951 |
| YP_008770699.1 | NC_022766_p63 | hypothetical protein | phrog_15973 | unknown function | unknown function | 1 | 40803 | 41132 |
| YP_008770677.1 | NC_022766_p41 | DNA Polymerase III alpha subunit | phrog_405 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 28378 | 31470 |
| YP_008770654.1 | NC_022766_p18 | hypothetical protein | phrog_195 | head-tail adaptor | connector | 1 | 10781 | 11173 |
| YP_008770642.1 | NC_022766_p6 | hypothetical protein | phrog_10975 | unknown function | unknown function | -1 | 2453 | 2761 |
| YP_008770708.1 | NC_022766_p72 | hypothetical protein | phrog_17250 | unknown function | unknown function | -1 | 46418 | 46645 |
| YP_008770643.1 | NC_022766_p7 | hypothetical protein | phrog_13575 | unknown function | unknown function | -1 | 2867 | 3124 |
| YP_008770685.1 | NC_022766_p49 | hypothetical protein | phrog_14953 | unknown function | unknown function | 1 | 35282 | 35464 |
| YP_008770693.1 | NC_022766_p57 | hypothetical protein | phrog_4224 | unknown function | unknown function | 1 | 38961 | 39308 |
| YP_008770687.1 | NC_022766_p51 | hypothetical protein | phrog_10941 | unknown function | unknown function | 1 | 35838 | 36152 |
| YP_008770706.1 | NC_022766_p70 | DNA polymerase III epsilon subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | -1 | 45059 | 45649 |
| YP_008770700.1 | NC_022766_p64 | hypothetical protein | phrog_12326 | unknown function | unknown function | 1 | 41234 | 41659 |
| YP_008770638.1 | NC_022766_p2 | hypothetical protein | phrog_21332 | unknown function | unknown function | -1 | 1081 | 1359 |
| YP_008770669.1 | NC_022766_p33 | holin | phrog_9987 | holin | lysis | 1 | 23230 | 23439 |
| YP_008770650.1 | NC_022766_p14 | scaffold protein | phrog_976 | head maturation protease | head and packaging | 1 | 8256 | 9116 |
| YP_008770652.1 | NC_022766_p16 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 9580 | 10470 |
| YP_008770639.1 | NC_022766_p3 | hypothetical protein | phrog_11595 | unknown function | unknown function | -1 | 1421 | 1651 |
| YP_008770709.1 | NC_022766_p73 | Holliday junction resolvase | phrog_9019 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 47005 | 47487 |
| YP_008770689.1 | NC_022766_p53 | hypothetical protein | phrog_11220 | unknown function | unknown function | 1 | 36736 | 37080 |
| YP_008770637.1 | NC_022766_p1 | hypothetical protein | phrog_6177 | unknown function | unknown function | 1 | 65 | 739 |
| YP_008770688.1 | NC_022766_p52 | deoxynucleotide monopohosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 36152 | 36736 |
| YP_008770681.1 | NC_022766_p45 | hypothetical protein | phrog_6833 | unknown function | unknown function | 1 | 33547 | 33792 |
| YP_008770648.1 | NC_022766_p12 | hypothetical protein | phrog_15889 | unknown function | unknown function | -1 | 7766 | 7891 |
| YP_008770651.1 | NC_022766_p15 | hypothetical protein | phrog_8960 | head scaffolding protein | head and packaging | 1 | 9138 | 9560 |
| YP_008770703.1 | NC_022766_p67 | hypothetical protein | phrog_5422 | unknown function | unknown function | 1 | 43717 | 44130 |
| YP_008770665.1 | NC_022766_p29 | hypothetical protein | phrog_1887 | tail protein | tail | 1 | 20604 | 21554 |
| YP_008770686.1 | NC_022766_p50 | hypothetical protein | phrog_11513 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 35585 | 35848 |
| YP_008770644.1 | NC_022766_p8 | terminase large subunit | phrog_675 | terminase large subunit | head and packaging | 1 | 3227 | 4912 |
| YP_008770662.1 | NC_022766_p26 | hypothetical protein | phrog_10519 | virion structural protein | head and packaging | 1 | 16124 | 18619 |
| YP_008770684.1 | NC_022766_p48 | hypothetical protein | phrog_11297 | unknown function | unknown function | 1 | 35114 | 35281 |
| YP_008770656.1 | NC_022766_p20 | hypothetical protein | phrog_8346 | unknown function | unknown function | 1 | 11618 | 12046 |
| YP_008770661.1 | NC_022766_p25 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 13792 | 16110 |
| YP_008770690.1 | NC_022766_p54 | protein kinase | phrog_11167 | serine-threonine kinase | other | 1 | 37227 | 38036 |
| YP_008770678.1 | NC_022766_p42 | PD-(D/E)XK nuclease | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 31473 | 32318 |
| YP_008770649.1 | NC_022766_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8107 | 8259 |
| YP_008770704.1 | NC_022766_p68 | hypothetical protein | phrog_8966 | unknown function | unknown function | 1 | 44201 | 44404 |
| YP_008770646.1 | NC_022766_p10 | minor head protein | phrog_3517 | head morphogenesis | head and packaging | 1 | 6364 | 7266 |
| YP_008770641.1 | NC_022766_p5 | hypothetical protein | phrog_10726 | unknown function | unknown function | -1 | 1955 | 2170 |
| YP_008770707.1 | NC_022766_p71 | hypothetical protein | phrog_13742 | peptidase | other | -1 | 45650 | 46417 |
| YP_008770710.1 | NC_022766_p74 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47493 | 47630 |
| YP_008770658.1 | NC_022766_p22 | hypothetical protein | phrog_290 | minor tail protein | tail | 1 | 12234 | 13172 |
| YP_008770655.1 | NC_022766_p19 | tail completion protein | phrog_26 | tail completion or Neck1 protein | connector | 1 | 11178 | 11621 |
| YP_008770680.1 | NC_022766_p44 | RNA polymerase sigma factor | phrog_1740 | RNA polymerase sigma factor | transcription regulation | 1 | 32870 | 33547 |
| YP_008770667.1 | NC_022766_p31 | phosphodiesterase | phrog_1625 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 21818 | 22234 |
| YP_008770657.1 | NC_022766_p21 | hypothetical protein | phrog_12043 | unknown function | unknown function | 1 | 12058 | 12234 |