Genomic map of Bacillus phage Staley (NC_022767)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022767
Definition
Bacillus phage Staley, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Slashvirus.
DB of origin
REFSEQ
Length
81656
Host Name
Bacillus megaterium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
113
%GC
35.34
Number of singletons
5
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008770803.1 NC_022767_p89 hypothetical protein phrog_5068 unknown function unknown function -1 61476 61745
YP_008770805.1 NC_022767_p91 ribonucleotide reductase alpha subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 62850 65183
YP_008770757.1 NC_022767_p43 hypothetical protein phrog_11740 unknown function unknown function 1 21248 21685
YP_008770808.1 NC_022767_p94 hypothetical protein phrog_21197 unknown function unknown function 1 66041 66307
YP_008770784.1 NC_022767_p70 RecB exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 50581 51306
YP_008770761.1 NC_022767_p47 tailspike protein phrog_12123 tail spike protein tail 1 24719 27313
YP_008770813.1 NC_022767_p99 integrase/recombinase phrog_1 integrase integration and excision -1 69900 70799
YP_008770807.1 NC_022767_p93 hypothetical protein phrog_19768 unknown function unknown function -1 65623 65811
YP_008770740.1 NC_022767_p26 dUTPase phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 8753 9235
YP_008770788.1 NC_022767_p74 hypothetical protein phrog_20927 unknown function unknown function -1 52093 52419
YP_008770816.1 NC_022767_p102 hypothetical protein phrog_20781 unknown function unknown function -1 73235 73462
YP_008770722.1 NC_022767_p8 hypothetical protein phrog_20689 unknown function unknown function 1 2389 2568
YP_008770811.1 NC_022767_p97 hypothetical protein phrog_16518 unknown function unknown function 1 67129 67269
YP_008770778.1 NC_022767_p64 Holliday junction resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 47015 47512
YP_008770748.1 NC_022767_p34 hypothetical protein phrog_2739 portal protein head and packaging 1 15248 16600
YP_008770747.1 NC_022767_p33 terminase large subunit phrog_2 terminase large subunit head and packaging 1 13537 15183
YP_008770826.1 NC_022767_p112 hypothetical protein singleton unknown function unknown function -1 79586 79882
YP_008770755.1 NC_022767_p41 hypothetical protein phrog_15602 unknown function unknown function 1 20011 20517
YP_008770720.1 NC_022767_p6 hypothetical protein phrog_27276 unknown function unknown function 1 1951 2028
YP_008770738.1 NC_022767_p24 hypothetical protein phrog_21477 unknown function unknown function 1 7859 8056
YP_008770825.1 NC_022767_p111 hypothetical protein singleton unknown function unknown function -1 79368 79589
YP_008770823.1 NC_022767_p109 hypothetical protein phrog_4874 unknown function unknown function -1 78292 78624
YP_008770796.1 NC_022767_p82 hypothetical protein phrog_14790 unknown function unknown function -1 56648 57088
YP_008770782.1 NC_022767_p68 hypothetical protein phrog_20975 unknown function unknown function -1 49616 49765
YP_008770736.1 NC_022767_p22 hypothetical protein phrog_15095 unknown function unknown function 1 6804 7511
YP_008770734.1 NC_022767_p20 hypothetical protein phrog_14252 unknown function unknown function 1 6328 6528
YP_008770737.1 NC_022767_p23 hypothetical protein phrog_21642 unknown function unknown function 1 7513 7869
YP_008770745.1 NC_022767_p31 N-acetylmuramyl-L-alanine amidase phrog_14642 endolysin lysis 1 11901 12527
YP_008770718.1 NC_022767_p4 hypothetical protein phrog_19580 unknown function unknown function 1 1294 1773
YP_008770799.1 NC_022767_p85 hypothetical protein phrog_6081 unknown function unknown function -1 58574 59068
YP_008770814.1 NC_022767_p100 RNA polymerase sigma 70 factor phrog_21612 RNA polymerase sigma factor transcription regulation -1 70963 72813
YP_008770765.1 NC_022767_p51 hypothetical protein phrog_16225 unknown function unknown function 1 28814 29260
YP_008770787.1 NC_022767_p73 hypothetical protein phrog_6884 unknown function unknown function -1 51803 52093
YP_008770770.1 NC_022767_p56 hypothetical protein phrog_15158 unknown function unknown function 1 37674 38039
YP_008770758.1 NC_022767_p44 hypothetical protein phrog_20626 unknown function unknown function 1 21716 24418
YP_008770739.1 NC_022767_p25 RNA polymerase sigma factor phrog_1740 RNA polymerase sigma factor transcription regulation 1 8046 8756
YP_008770744.1 NC_022767_p30 DNA binding protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 11153 11659
YP_008770772.1 NC_022767_p58 hypothetical protein phrog_3323 unknown function unknown function 1 44069 44248
YP_008770786.1 NC_022767_p72 hypothetical protein phrog_27393 unknown function unknown function -1 51610 51801
YP_008770804.1 NC_022767_p90 ribonucleotide reductase beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism -1 61763 62797
YP_008770764.1 NC_022767_p50 hypothetical protein phrog_17856 unknown function unknown function 1 28593 28769
YP_008770751.1 NC_022767_p37 hypothetical protein phrog_16565 unknown function unknown function 1 18089 19027
YP_008770762.1 NC_022767_p48 hypothetical protein phrog_16476 unknown function unknown function 1 27325 28032
YP_008770822.1 NC_022767_p108 hypothetical protein phrog_4655 unknown function unknown function -1 77895 78206
YP_008770750.1 NC_022767_p36 hypothetical protein phrog_16058 unknown function unknown function 1 17658 18071
YP_008770756.1 NC_022767_p42 hypothetical protein phrog_10590 unknown function unknown function 1 20714 21232
YP_008770724.1 NC_022767_p10 hypothetical protein phrog_9662 unknown function unknown function 1 2935 3288
YP_008770719.1 NC_022767_p5 hypothetical protein phrog_6504 unknown function unknown function 1 1766 1951
YP_008770800.1 NC_022767_p86 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 59098 60090
YP_008770775.1 NC_022767_p61 holin phrog_263 holin lysis 1 45922 46182
YP_008770766.1 NC_022767_p52 hypothetical protein phrog_16108 tail length tape measure protein tail 1 29253 29729
YP_008770824.1 NC_022767_p110 hypothetical protein phrog_586 unknown function unknown function -1 78959 79366
YP_008770821.1 NC_022767_p107 hypothetical protein phrog_19941 unknown function unknown function -1 77167 77808
YP_008770809.1 NC_022767_p95 hypothetical protein phrog_21171 unknown function unknown function 1 66555 66659
YP_008770806.1 NC_022767_p92 hypothetical protein phrog_14761 unknown function unknown function -1 65195 65578
YP_008770752.1 NC_022767_p38 hypothetical protein phrog_15541 unknown function unknown function 1 19081 19473
YP_008770810.1 NC_022767_p96 hypothetical protein membrane protein phrog_13699 membrane protein moron, auxiliary metabolic gene and host takeover 1 66656 67126
YP_008770726.1 NC_022767_p12 hypothetical protein phrog_3458 unknown function unknown function 1 3887 4084
YP_008770729.1 NC_022767_p15 hypothetical protein phrog_19518 unknown function unknown function 1 4610 4849
YP_008770797.1 NC_022767_p83 phosphate starvation-inducible protein phrog_170 PhoH-like phosphate starvation-inducible other -1 57155 57940
YP_008770727.1 NC_022767_p13 hypothetical protein phrog_20290 lipoprotein other 1 4081 4257
YP_008770798.1 NC_022767_p84 DNA polymerase III epsilon subunit phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 57958 58560
YP_008770715.1 NC_022767_p1 hypothetical protein phrog_35323 unknown function unknown function 1 479 652
YP_008770759.1 NC_022767_p45 hypothetical protein phrog_12586 unknown function unknown function 1 24435 24626
YP_008770802.1 NC_022767_p88 hypothetical protein phrog_15943 unknown function unknown function -1 60362 61363
YP_008770820.1 NC_022767_p106 hypothetical protein singleton unknown function unknown function -1 77073 77174
YP_008770730.1 NC_022767_p16 hypothetical protein phrog_36785 unknown function unknown function 1 4849 5016
YP_008770735.1 NC_022767_p21 hypothetical protein phrog_35610 unknown function unknown function 1 6585 6710
YP_008770717.1 NC_022767_p3 hypothetical protein phrog_19945 unknown function unknown function 1 1067 1294
YP_008770794.1 NC_022767_p80 hypothetical protein phrog_21792 unknown function unknown function -1 56082 56288
YP_008770728.1 NC_022767_p14 hypothetical protein phrog_21663 unknown function unknown function 1 4376 4573
YP_008770725.1 NC_022767_p11 hypothetical protein phrog_33558 unknown function unknown function 1 3367 3912
YP_008770753.1 NC_022767_p39 hypothetical protein phrog_16258 unknown function unknown function 1 19470 19829
YP_008770773.1 NC_022767_p59 hypothetical protein phrog_1625 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 44262 44708
YP_008770819.1 NC_022767_p105 hypothetical protein phrog_19413 unknown function unknown function 1 75914 76363
YP_008770776.1 NC_022767_p62 hypothetical protein phrog_21606 unknown function unknown function -1 46215 46760
YP_008770732.1 NC_022767_p18 hypothetical protein phrog_20367 unknown function unknown function 1 5717 5962
YP_008770818.1 NC_022767_p104 secreted sporulation protein phrog_16914 sporulation protein moron, auxiliary metabolic gene and host takeover 1 74657 75259
YP_008770812.1 NC_022767_p98 nucleoside triphosphate hydrolase phrog_5156 unknown function unknown function 1 67266 69755
YP_008770767.1 NC_022767_p53 hypothetical protein phrog_16037 tail length tape measure protein tail 1 29729 30187
YP_008770817.1 NC_022767_p103 antirepressor/regulatory protein phrog_63 anti-repressor Ant transcription regulation 1 73851 74573
YP_008770754.1 NC_022767_p40 hypothetical protein phrog_15871 unknown function unknown function 1 19829 19999
YP_008770777.1 NC_022767_p63 hypothetical protein phrog_16935 unknown function unknown function -1 46783 46953
YP_008770742.1 NC_022767_p28 hypothetical protein phrog_15855 unknown function unknown function 1 10073 10342
YP_008770741.1 NC_022767_p27 hypothetical protein phrog_16084 transcriptional regulator transcription regulation 1 9348 9968
YP_008770743.1 NC_022767_p29 metal-dependent hydrolase phrog_7339 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 10344 11105
YP_008770779.1 NC_022767_p65 HNH homing endonuclease II phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 47493 48209
YP_008770716.1 NC_022767_p2 hypothetical protein phrog_34120 unknown function unknown function 1 673 918
YP_008770795.1 NC_022767_p81 hypothetical protein phrog_8252 unknown function unknown function -1 56281 56631
YP_008770771.1 NC_022767_p57 tail fiber protein phrog_18983 tail fiber protein tail 1 38043 43955
YP_008770793.1 NC_022767_p79 guanylate kinase phrog_1815 guanylate kinase other -1 55565 56110
YP_008770827.1 NC_022767_p113 hypothetical protein phrog_20801 unknown function unknown function -1 80139 80366
YP_008770731.1 NC_022767_p17 hypothetical protein phrog_19251 unknown function unknown function 1 5013 5717
YP_008770769.1 NC_022767_p55 tape measure protein phrog_14917 tail length tape measure protein tail 1 30925 37674
YP_008770733.1 NC_022767_p19 hypothetical protein phrog_19573 unknown function unknown function 1 6046 6231
YP_008770792.1 NC_022767_p78 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 54188 55558
YP_008770760.1 NC_022767_p46 hypothetical protein singleton unknown function unknown function 1 24637 24732
YP_008770749.1 NC_022767_p35 hypothetical protein phrog_16389 unknown function unknown function 1 16620 17639
YP_008770781.1 NC_022767_p67 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 48694 49611
YP_008770780.1 NC_022767_p66 hypothetical protein phrog_20066 unknown function unknown function -1 48289 48672
YP_008770790.1 NC_022767_p76 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 52683 53711
YP_008770721.1 NC_022767_p7 hypothetical protein phrog_25197 unknown function unknown function 1 2033 2392
YP_008770783.1 NC_022767_p69 RNA polymerase sigma factor phrog_351 RNA polymerase sigma factor transcription regulation -1 49762 50463
YP_008770815.1 NC_022767_p101 hypothetical protein phrog_21879 unknown function unknown function -1 72842 73231
YP_008770774.1 NC_022767_p60 endolysin phrog_2649 endolysin lysis 1 44724 45902
YP_008770723.1 NC_022767_p9 hypothetical protein phrog_19827 unknown function unknown function 1 2565 2942
YP_008770746.1 NC_022767_p32 hypothetical protein phrog_16146 unknown function unknown function 1 12663 13532
YP_008770785.1 NC_022767_p71 hypothetical protein phrog_21638 unknown function unknown function -1 51306 51554
YP_008770801.1 NC_022767_p87 hypothetical protein singleton unknown function unknown function -1 60087 60314
YP_008770763.1 NC_022767_p49 hypothetical protein phrog_16455 unknown function unknown function 1 28120 28578
YP_008770768.1 NC_022767_p54 HNH homing endonuclease III phrog_5104 unknown function unknown function 1 30203 30925
YP_008770791.1 NC_022767_p77 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 53724 54185
YP_008770789.1 NC_022767_p75 hypothetical protein phrog_18922 unknown function unknown function -1 52495 52680