| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_022767 |
Definition |
Bacillus phage Staley, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Slashvirus. |
DB of origin |
REFSEQ |
Length |
81656 |
Host Name |
Bacillus megaterium |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
113 |
%GC |
35.34 |
Number of singletons |
5 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008770803.1 | NC_022767_p89 | hypothetical protein | phrog_5068 | unknown function | unknown function | -1 | 61476 | 61745 |
| YP_008770805.1 | NC_022767_p91 | ribonucleotide reductase alpha subunit | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | -1 | 62850 | 65183 |
| YP_008770757.1 | NC_022767_p43 | hypothetical protein | phrog_11740 | unknown function | unknown function | 1 | 21248 | 21685 |
| YP_008770808.1 | NC_022767_p94 | hypothetical protein | phrog_21197 | unknown function | unknown function | 1 | 66041 | 66307 |
| YP_008770784.1 | NC_022767_p70 | RecB exonuclease | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 50581 | 51306 |
| YP_008770761.1 | NC_022767_p47 | tailspike protein | phrog_12123 | tail spike protein | tail | 1 | 24719 | 27313 |
| YP_008770813.1 | NC_022767_p99 | integrase/recombinase | phrog_1 | integrase | integration and excision | -1 | 69900 | 70799 |
| YP_008770807.1 | NC_022767_p93 | hypothetical protein | phrog_19768 | unknown function | unknown function | -1 | 65623 | 65811 |
| YP_008770740.1 | NC_022767_p26 | dUTPase | phrog_173 | nucleoside triphosphate pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 8753 | 9235 |
| YP_008770788.1 | NC_022767_p74 | hypothetical protein | phrog_20927 | unknown function | unknown function | -1 | 52093 | 52419 |
| YP_008770816.1 | NC_022767_p102 | hypothetical protein | phrog_20781 | unknown function | unknown function | -1 | 73235 | 73462 |
| YP_008770722.1 | NC_022767_p8 | hypothetical protein | phrog_20689 | unknown function | unknown function | 1 | 2389 | 2568 |
| YP_008770811.1 | NC_022767_p97 | hypothetical protein | phrog_16518 | unknown function | unknown function | 1 | 67129 | 67269 |
| YP_008770778.1 | NC_022767_p64 | Holliday junction resolvase | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 47015 | 47512 |
| YP_008770748.1 | NC_022767_p34 | hypothetical protein | phrog_2739 | portal protein | head and packaging | 1 | 15248 | 16600 |
| YP_008770747.1 | NC_022767_p33 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 13537 | 15183 |
| YP_008770826.1 | NC_022767_p112 | hypothetical protein | singleton | unknown function | unknown function | -1 | 79586 | 79882 |
| YP_008770755.1 | NC_022767_p41 | hypothetical protein | phrog_15602 | unknown function | unknown function | 1 | 20011 | 20517 |
| YP_008770720.1 | NC_022767_p6 | hypothetical protein | phrog_27276 | unknown function | unknown function | 1 | 1951 | 2028 |
| YP_008770738.1 | NC_022767_p24 | hypothetical protein | phrog_21477 | unknown function | unknown function | 1 | 7859 | 8056 |
| YP_008770825.1 | NC_022767_p111 | hypothetical protein | singleton | unknown function | unknown function | -1 | 79368 | 79589 |
| YP_008770823.1 | NC_022767_p109 | hypothetical protein | phrog_4874 | unknown function | unknown function | -1 | 78292 | 78624 |
| YP_008770796.1 | NC_022767_p82 | hypothetical protein | phrog_14790 | unknown function | unknown function | -1 | 56648 | 57088 |
| YP_008770782.1 | NC_022767_p68 | hypothetical protein | phrog_20975 | unknown function | unknown function | -1 | 49616 | 49765 |
| YP_008770736.1 | NC_022767_p22 | hypothetical protein | phrog_15095 | unknown function | unknown function | 1 | 6804 | 7511 |
| YP_008770734.1 | NC_022767_p20 | hypothetical protein | phrog_14252 | unknown function | unknown function | 1 | 6328 | 6528 |
| YP_008770737.1 | NC_022767_p23 | hypothetical protein | phrog_21642 | unknown function | unknown function | 1 | 7513 | 7869 |
| YP_008770745.1 | NC_022767_p31 | N-acetylmuramyl-L-alanine amidase | phrog_14642 | endolysin | lysis | 1 | 11901 | 12527 |
| YP_008770718.1 | NC_022767_p4 | hypothetical protein | phrog_19580 | unknown function | unknown function | 1 | 1294 | 1773 |
| YP_008770799.1 | NC_022767_p85 | hypothetical protein | phrog_6081 | unknown function | unknown function | -1 | 58574 | 59068 |
| YP_008770814.1 | NC_022767_p100 | RNA polymerase sigma 70 factor | phrog_21612 | RNA polymerase sigma factor | transcription regulation | -1 | 70963 | 72813 |
| YP_008770765.1 | NC_022767_p51 | hypothetical protein | phrog_16225 | unknown function | unknown function | 1 | 28814 | 29260 |
| YP_008770787.1 | NC_022767_p73 | hypothetical protein | phrog_6884 | unknown function | unknown function | -1 | 51803 | 52093 |
| YP_008770770.1 | NC_022767_p56 | hypothetical protein | phrog_15158 | unknown function | unknown function | 1 | 37674 | 38039 |
| YP_008770758.1 | NC_022767_p44 | hypothetical protein | phrog_20626 | unknown function | unknown function | 1 | 21716 | 24418 |
| YP_008770739.1 | NC_022767_p25 | RNA polymerase sigma factor | phrog_1740 | RNA polymerase sigma factor | transcription regulation | 1 | 8046 | 8756 |
| YP_008770744.1 | NC_022767_p30 | DNA binding protein | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 11153 | 11659 |
| YP_008770772.1 | NC_022767_p58 | hypothetical protein | phrog_3323 | unknown function | unknown function | 1 | 44069 | 44248 |
| YP_008770786.1 | NC_022767_p72 | hypothetical protein | phrog_27393 | unknown function | unknown function | -1 | 51610 | 51801 |
| YP_008770804.1 | NC_022767_p90 | ribonucleotide reductase beta subunit | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | -1 | 61763 | 62797 |
| YP_008770764.1 | NC_022767_p50 | hypothetical protein | phrog_17856 | unknown function | unknown function | 1 | 28593 | 28769 |
| YP_008770751.1 | NC_022767_p37 | hypothetical protein | phrog_16565 | unknown function | unknown function | 1 | 18089 | 19027 |
| YP_008770762.1 | NC_022767_p48 | hypothetical protein | phrog_16476 | unknown function | unknown function | 1 | 27325 | 28032 |
| YP_008770822.1 | NC_022767_p108 | hypothetical protein | phrog_4655 | unknown function | unknown function | -1 | 77895 | 78206 |
| YP_008770750.1 | NC_022767_p36 | hypothetical protein | phrog_16058 | unknown function | unknown function | 1 | 17658 | 18071 |
| YP_008770756.1 | NC_022767_p42 | hypothetical protein | phrog_10590 | unknown function | unknown function | 1 | 20714 | 21232 |
| YP_008770724.1 | NC_022767_p10 | hypothetical protein | phrog_9662 | unknown function | unknown function | 1 | 2935 | 3288 |
| YP_008770719.1 | NC_022767_p5 | hypothetical protein | phrog_6504 | unknown function | unknown function | 1 | 1766 | 1951 |
| YP_008770800.1 | NC_022767_p86 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 59098 | 60090 |
| YP_008770775.1 | NC_022767_p61 | holin | phrog_263 | holin | lysis | 1 | 45922 | 46182 |
| YP_008770766.1 | NC_022767_p52 | hypothetical protein | phrog_16108 | tail length tape measure protein | tail | 1 | 29253 | 29729 |
| YP_008770824.1 | NC_022767_p110 | hypothetical protein | phrog_586 | unknown function | unknown function | -1 | 78959 | 79366 |
| YP_008770821.1 | NC_022767_p107 | hypothetical protein | phrog_19941 | unknown function | unknown function | -1 | 77167 | 77808 |
| YP_008770809.1 | NC_022767_p95 | hypothetical protein | phrog_21171 | unknown function | unknown function | 1 | 66555 | 66659 |
| YP_008770806.1 | NC_022767_p92 | hypothetical protein | phrog_14761 | unknown function | unknown function | -1 | 65195 | 65578 |
| YP_008770752.1 | NC_022767_p38 | hypothetical protein | phrog_15541 | unknown function | unknown function | 1 | 19081 | 19473 |
| YP_008770810.1 | NC_022767_p96 | hypothetical protein membrane protein | phrog_13699 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 66656 | 67126 |
| YP_008770726.1 | NC_022767_p12 | hypothetical protein | phrog_3458 | unknown function | unknown function | 1 | 3887 | 4084 |
| YP_008770729.1 | NC_022767_p15 | hypothetical protein | phrog_19518 | unknown function | unknown function | 1 | 4610 | 4849 |
| YP_008770797.1 | NC_022767_p83 | phosphate starvation-inducible protein | phrog_170 | PhoH-like phosphate starvation-inducible | other | -1 | 57155 | 57940 |
| YP_008770727.1 | NC_022767_p13 | hypothetical protein | phrog_20290 | lipoprotein | other | 1 | 4081 | 4257 |
| YP_008770798.1 | NC_022767_p84 | DNA polymerase III epsilon subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | -1 | 57958 | 58560 |
| YP_008770715.1 | NC_022767_p1 | hypothetical protein | phrog_35323 | unknown function | unknown function | 1 | 479 | 652 |
| YP_008770759.1 | NC_022767_p45 | hypothetical protein | phrog_12586 | unknown function | unknown function | 1 | 24435 | 24626 |
| YP_008770802.1 | NC_022767_p88 | hypothetical protein | phrog_15943 | unknown function | unknown function | -1 | 60362 | 61363 |
| YP_008770820.1 | NC_022767_p106 | hypothetical protein | singleton | unknown function | unknown function | -1 | 77073 | 77174 |
| YP_008770730.1 | NC_022767_p16 | hypothetical protein | phrog_36785 | unknown function | unknown function | 1 | 4849 | 5016 |
| YP_008770735.1 | NC_022767_p21 | hypothetical protein | phrog_35610 | unknown function | unknown function | 1 | 6585 | 6710 |
| YP_008770717.1 | NC_022767_p3 | hypothetical protein | phrog_19945 | unknown function | unknown function | 1 | 1067 | 1294 |
| YP_008770794.1 | NC_022767_p80 | hypothetical protein | phrog_21792 | unknown function | unknown function | -1 | 56082 | 56288 |
| YP_008770728.1 | NC_022767_p14 | hypothetical protein | phrog_21663 | unknown function | unknown function | 1 | 4376 | 4573 |
| YP_008770725.1 | NC_022767_p11 | hypothetical protein | phrog_33558 | unknown function | unknown function | 1 | 3367 | 3912 |
| YP_008770753.1 | NC_022767_p39 | hypothetical protein | phrog_16258 | unknown function | unknown function | 1 | 19470 | 19829 |
| YP_008770773.1 | NC_022767_p59 | hypothetical protein | phrog_1625 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 44262 | 44708 |
| YP_008770819.1 | NC_022767_p105 | hypothetical protein | phrog_19413 | unknown function | unknown function | 1 | 75914 | 76363 |
| YP_008770776.1 | NC_022767_p62 | hypothetical protein | phrog_21606 | unknown function | unknown function | -1 | 46215 | 46760 |
| YP_008770732.1 | NC_022767_p18 | hypothetical protein | phrog_20367 | unknown function | unknown function | 1 | 5717 | 5962 |
| YP_008770818.1 | NC_022767_p104 | secreted sporulation protein | phrog_16914 | sporulation protein | moron, auxiliary metabolic gene and host takeover | 1 | 74657 | 75259 |
| YP_008770812.1 | NC_022767_p98 | nucleoside triphosphate hydrolase | phrog_5156 | unknown function | unknown function | 1 | 67266 | 69755 |
| YP_008770767.1 | NC_022767_p53 | hypothetical protein | phrog_16037 | tail length tape measure protein | tail | 1 | 29729 | 30187 |
| YP_008770817.1 | NC_022767_p103 | antirepressor/regulatory protein | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 73851 | 74573 |
| YP_008770754.1 | NC_022767_p40 | hypothetical protein | phrog_15871 | unknown function | unknown function | 1 | 19829 | 19999 |
| YP_008770777.1 | NC_022767_p63 | hypothetical protein | phrog_16935 | unknown function | unknown function | -1 | 46783 | 46953 |
| YP_008770742.1 | NC_022767_p28 | hypothetical protein | phrog_15855 | unknown function | unknown function | 1 | 10073 | 10342 |
| YP_008770741.1 | NC_022767_p27 | hypothetical protein | phrog_16084 | transcriptional regulator | transcription regulation | 1 | 9348 | 9968 |
| YP_008770743.1 | NC_022767_p29 | metal-dependent hydrolase | phrog_7339 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 10344 | 11105 |
| YP_008770779.1 | NC_022767_p65 | HNH homing endonuclease II | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 47493 | 48209 |
| YP_008770716.1 | NC_022767_p2 | hypothetical protein | phrog_34120 | unknown function | unknown function | 1 | 673 | 918 |
| YP_008770795.1 | NC_022767_p81 | hypothetical protein | phrog_8252 | unknown function | unknown function | -1 | 56281 | 56631 |
| YP_008770771.1 | NC_022767_p57 | tail fiber protein | phrog_18983 | tail fiber protein | tail | 1 | 38043 | 43955 |
| YP_008770793.1 | NC_022767_p79 | guanylate kinase | phrog_1815 | guanylate kinase | other | -1 | 55565 | 56110 |
| YP_008770827.1 | NC_022767_p113 | hypothetical protein | phrog_20801 | unknown function | unknown function | -1 | 80139 | 80366 |
| YP_008770731.1 | NC_022767_p17 | hypothetical protein | phrog_19251 | unknown function | unknown function | 1 | 5013 | 5717 |
| YP_008770769.1 | NC_022767_p55 | tape measure protein | phrog_14917 | tail length tape measure protein | tail | 1 | 30925 | 37674 |
| YP_008770733.1 | NC_022767_p19 | hypothetical protein | phrog_19573 | unknown function | unknown function | 1 | 6046 | 6231 |
| YP_008770792.1 | NC_022767_p78 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 54188 | 55558 |
| YP_008770760.1 | NC_022767_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24637 | 24732 |
| YP_008770749.1 | NC_022767_p35 | hypothetical protein | phrog_16389 | unknown function | unknown function | 1 | 16620 | 17639 |
| YP_008770781.1 | NC_022767_p67 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 48694 | 49611 |
| YP_008770780.1 | NC_022767_p66 | hypothetical protein | phrog_20066 | unknown function | unknown function | -1 | 48289 | 48672 |
| YP_008770790.1 | NC_022767_p76 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 52683 | 53711 |
| YP_008770721.1 | NC_022767_p7 | hypothetical protein | phrog_25197 | unknown function | unknown function | 1 | 2033 | 2392 |
| YP_008770783.1 | NC_022767_p69 | RNA polymerase sigma factor | phrog_351 | RNA polymerase sigma factor | transcription regulation | -1 | 49762 | 50463 |
| YP_008770815.1 | NC_022767_p101 | hypothetical protein | phrog_21879 | unknown function | unknown function | -1 | 72842 | 73231 |
| YP_008770774.1 | NC_022767_p60 | endolysin | phrog_2649 | endolysin | lysis | 1 | 44724 | 45902 |
| YP_008770723.1 | NC_022767_p9 | hypothetical protein | phrog_19827 | unknown function | unknown function | 1 | 2565 | 2942 |
| YP_008770746.1 | NC_022767_p32 | hypothetical protein | phrog_16146 | unknown function | unknown function | 1 | 12663 | 13532 |
| YP_008770785.1 | NC_022767_p71 | hypothetical protein | phrog_21638 | unknown function | unknown function | -1 | 51306 | 51554 |
| YP_008770801.1 | NC_022767_p87 | hypothetical protein | singleton | unknown function | unknown function | -1 | 60087 | 60314 |
| YP_008770763.1 | NC_022767_p49 | hypothetical protein | phrog_16455 | unknown function | unknown function | 1 | 28120 | 28578 |
| YP_008770768.1 | NC_022767_p54 | HNH homing endonuclease III | phrog_5104 | unknown function | unknown function | 1 | 30203 | 30925 |
| YP_008770791.1 | NC_022767_p77 | homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 53724 | 54185 |
| YP_008770789.1 | NC_022767_p75 | hypothetical protein | phrog_18922 | unknown function | unknown function | -1 | 52495 | 52680 |