Genomic map of Lactobacillus phage phiJB (NC_022775)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022775
Definition
Lactobacillus phage phiJB, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
36969
Host Name
Lactobacillus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
46
%GC
47.7
Number of singletons
8
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008772044.1 NC_022775_p31 terminase large subunit phrog_2 terminase large subunit head and packaging 1 19941 21254
YP_008772026.1 NC_022775_p13 hypothetical protein phrog_888 unknown function unknown function -1 8832 9209
YP_008772047.1 NC_022775_p34 scaffolding protein phrog_194 head scaffolding protein head and packaging 1 23975 24511
YP_008772042.1 NC_022775_p29 hypothetical protein phrog_248 transcriptional activator transcription regulation 1 18519 19013
YP_008772056.1 NC_022775_p43 hypothetical protein phrog_706 unknown function unknown function 1 28068 28670
YP_008772025.1 NC_022775_p12 integrase phrog_1 integrase integration and excision -1 7713 8819
YP_008772053.1 NC_022775_p40 hypothetical protein phrog_913 minor head protein head and packaging 1 26684 27097
YP_008772049.1 NC_022775_p36 hypothetical protein singleton unknown function unknown function 1 25376 25591
YP_008772040.1 NC_022775_p27 hypothetical protein singleton unknown function unknown function 1 18195 18356
YP_008772037.1 NC_022775_p24 complement component C9 precursor singleton unknown function unknown function 1 17075 17254
YP_008772055.1 NC_022775_p42 hypothetical protein phrog_21296 unknown function unknown function 1 27650 28093
YP_008772036.1 NC_022775_p23 hypothetical protein singleton unknown function unknown function 1 16847 17071
YP_008772030.1 NC_022775_p17 hypothetical protein phrog_7634 unknown function unknown function 1 11561 11848
YP_008772027.1 NC_022775_p14 transcriptional regulators phrog_4 transcriptional repressor transcription regulation -1 9220 9885
YP_008772021.1 NC_022775_p8 hypothetical protein singleton unknown function unknown function 1 6126 6734
YP_008772039.1 NC_022775_p26 hypothetical protein singleton unknown function unknown function 1 17579 17842
YP_008772052.1 NC_022775_p39 hypothetical protein phrog_556 minor head protein head and packaging 1 26353 26694
YP_008772045.1 NC_022775_p32 minor structural protein phrog_533 portal protein head and packaging 1 21265 22782
YP_008772046.1 NC_022775_p33 hypothetical protein phrog_581 minor head protein head and packaging 1 22785 23912
YP_008772054.1 NC_022775_p41 main tail protein phrog_820 major tail protein tail 1 27102 27593
YP_008772048.1 NC_022775_p35 major capsid protein phrog_422 major head protein head and packaging 1 24516 25376
YP_008772024.1 NC_022775_p11 hypothetical protein phrog_16410 unknown function unknown function 1 7194 7523
YP_008772050.1 NC_022775_p37 hypothetical protein phrog_541 head-tail adaptor connector 1 25569 26000
YP_008772031.1 NC_022775_p18 type III restriction protein res subunit phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 11812 13209
YP_008772038.1 NC_022775_p25 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 17257 17589
YP_008772028.1 NC_022775_p15 cro-like transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 10042 10236
YP_008772041.1 NC_022775_p28 hypothetical protein singleton unknown function unknown function 1 18353 18514
YP_008772035.1 NC_022775_p22 hypothetical protein phrog_1313 DNA helicase DNA, RNA and nucleotide metabolism 1 15277 16593
YP_008772017.1 NC_022775_p4 hypothetical protein phrog_4325 holin lysis 1 4085 4507
YP_008772057.1 NC_022775_p44 hypothetical protein phrog_167 tail length tape measure protein tail 1 29120 32659
YP_008772019.1 NC_022775_p6 holin protein phrog_2609 holin lysis 1 4817 5140
YP_008772015.1 NC_022775_p2 hypothetical protein phrog_14733 unknown function unknown function 1 3504 3950
YP_008772022.1 NC_022775_p9 hypothetical protein phrog_2277 unknown function unknown function 1 6734 6910
YP_008772023.1 NC_022775_p10 cytochrome c family protein singleton unknown function unknown function 1 6907 7170
YP_008772058.1 NC_022775_p45 minor structural protein phrog_202 distal tail protein Dit tail 1 32669 34558
YP_008772051.1 NC_022775_p38 hypothetical protein phrog_793 head-tail adaptor connector 1 25997 26353
YP_008772018.1 NC_022775_p5 hypothetical protein phrog_3671 unknown function unknown function 1 4570 4839
YP_008772033.1 NC_022775_p20 hypothetical protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 13918 14487
YP_008772029.1 NC_022775_p16 AntA/AntB antirepressor phrog_63 anti-repressor Ant transcription regulation 1 10443 11192
YP_008772014.1 NC_022775_p1 minor structural protein phrog_35520 tail protein tail 1 1 3501
YP_008772034.1 NC_022775_p21 bifunctional DNA primase/polymerase phrog_695 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 14499 15284
YP_008772043.1 NC_022775_p30 terminase small subunit phrog_51 terminase small subunit head and packaging 1 19535 19963
YP_008772059.1 NC_022775_p46 minor structural protein phrog_4798 tail protein tail 1 34558 36954
YP_008772020.1 NC_022775_p7 muramidase phrog_291 endolysin lysis 1 5130 6014
YP_008772032.1 NC_022775_p19 phage-associated ATPase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 13209 13901
YP_008772016.1 NC_022775_p3 hypothetical protein phrog_9321 unknown function unknown function 1 3961 4125