Genomic map of Ralstonia phage RSB3 (NC_022917)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022917
Definition
Ralstonia phage RSB3 DNA, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Jiaoyazivirus; Ralstonia virus RSB3.
DB of origin
REFSEQ
Length
44578
Host Name
Ralstonia solanacearum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
50
%GC
61.03
Number of singletons
12
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008853932.1 NC_022917_p44 hypothetical protein phrog_8746 tail fiber assembly protein tail 1 38121 38540
YP_008853933.1 NC_022917_p45 DNA maturase A phrog_891 terminase small subunit head and packaging 1 38730 39014
YP_008853904.1 NC_022917_p16 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 7309 8118
YP_008853899.1 NC_022917_p11 hypothetical protein phrog_23350 unknown function unknown function 1 5093 5281
YP_008853935.1 NC_022917_p47 lysozyme phrog_7 endolysin lysis 1 40999 41538
YP_008853926.1 NC_022917_p38 tail tubular protein B phrog_457 tail protein tail 1 26238 28562
YP_008853898.1 NC_022917_p10 hypothetical protein phrog_26927 unknown function unknown function 1 4750 5046
YP_008853921.1 NC_022917_p33 hypothetical protein phrog_3112 virion structural protein head and packaging 1 21666 22022
YP_008853920.1 NC_022917_p32 hypothetical protein phrog_6472 unknown function unknown function 1 21239 21664
YP_008853914.1 NC_022917_p26 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 15421 16317
YP_008853915.1 NC_022917_p27 endonuclease phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 16310 16744
YP_008853917.1 NC_022917_p29 hypothetical protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 17316 18119
YP_008853909.1 NC_022917_p21 hypothetical protein singleton unknown function unknown function 1 10874 11059
YP_008853900.1 NC_022917_p12 hypothetical protein singleton unknown function unknown function 1 5361 5750
YP_008853918.1 NC_022917_p30 hypothetical protein singleton unknown function unknown function 1 18129 18341
YP_008853924.1 NC_022917_p36 capsid protein phrog_267 major head protein head and packaging 1 24576 25598
YP_008853927.1 NC_022917_p39 hypothetical protein phrog_12032 short tail fiber protein tail 1 28565 29035
YP_008853889.1 NC_022917_p1 hypothetical protein phrog_1448 unknown function unknown function 1 1600 2130
YP_008853892.1 NC_022917_p4 hypothetical protein phrog_19922 unknown function unknown function 1 2780 3034
YP_008853929.1 NC_022917_p41 hypothetical protein phrog_2083 internal virion lysozyme motif head and packaging 1 29752 32481
YP_008853903.1 NC_022917_p15 hypothetical protein phrog_34831 unknown function unknown function 1 6613 7254
YP_008853891.1 NC_022917_p3 hypothetical protein singleton unknown function unknown function 1 2541 2783
YP_008853908.1 NC_022917_p20 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 10023 10877
YP_008853911.1 NC_022917_p23 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 11231 13741
YP_008853907.1 NC_022917_p19 hypothetical protein singleton unknown function unknown function 1 9670 10026
YP_008853912.1 NC_022917_p24 hypothetical protein phrog_5033 endolysin; inhibits RNA polymerase lysis 1 13738 14268
YP_008853893.1 NC_022917_p5 hypothetical protein singleton unknown function unknown function 1 3036 3257
YP_008853895.1 NC_022917_p7 hypothetical protein phrog_554 unknown function unknown function 1 3490 3831
YP_008853928.1 NC_022917_p40 internal virion protein phrog_4295 internal virion protein head and packaging 1 29032 29742
YP_008853916.1 NC_022917_p28 hypothetical protein phrog_1614 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 16741 17304
YP_008853936.1 NC_022917_p48 hypothetical protein phrog_5151 Rz-like spanin lysis 1 41540 41905
YP_008853919.1 NC_022917_p31 phage RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 18350 20782
YP_008853897.1 NC_022917_p9 hypothetical protein singleton unknown function unknown function 1 4481 4753
YP_008853901.1 NC_022917_p13 hypothetical protein singleton unknown function unknown function 1 5786 6136
YP_008853902.1 NC_022917_p14 hypothetical protein phrog_31557 unknown function unknown function 1 6133 6519
YP_008853913.1 NC_022917_p25 hypothetical protein phrog_862 unknown function unknown function 1 14301 15275
YP_008853923.1 NC_022917_p35 scaffolding protein phrog_1018 head scaffolding protein head and packaging 1 23610 24545
YP_008853896.1 NC_022917_p8 hypothetical protein phrog_11722 unknown function unknown function 1 4113 4484
YP_008853910.1 NC_022917_p22 hypothetical protein singleton unknown function unknown function 1 11056 11220
YP_008853894.1 NC_022917_p6 hypothetical protein singleton unknown function unknown function 1 3258 3497
YP_008853922.1 NC_022917_p34 head-tail connector protein phrog_449 head-tail adaptor connector 1 22035 23603
YP_008853931.1 NC_022917_p43 tail fiber protein phrog_13481 tail fiber protein tail 1 36449 38110
YP_008853930.1 NC_022917_p42 internal core protein phrog_342 internal virion protein with endolysin domain head and packaging 1 32491 36438
YP_008853938.1 NC_022917_p50 hypothetical protein singleton unknown function unknown function 1 42666 43910
YP_008853906.1 NC_022917_p18 hypothetical protein singleton unknown function unknown function 1 9404 9673
YP_008853890.1 NC_022917_p2 hypothetical protein phrog_3199 unknown function unknown function 1 2266 2544
YP_008853925.1 NC_022917_p37 tail tubular protein phrog_446 tail protein tail 1 25674 26234
YP_008853934.1 NC_022917_p46 DNA maturase phrog_38 terminase large subunit head and packaging 1 39031 40830
YP_008853905.1 NC_022917_p17 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 8130 9407
YP_008853937.1 NC_022917_p49 hypothetical protein phrog_1365 unknown function unknown function 1 42268 42597