Genomic map of Mycobacterium phage CloudWang3 (NC_022965)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022965
Definition
Mycobacterium phage CloudWang3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
REFSEQ
Length
52873
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
103
%GC
61.35
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008856872.1 NC_022965_p99 hypothetical protein phrog_2499 unknown function unknown function -1 50648 50845
YP_008856828.1 NC_022965_p55 hypothetical protein phrog_221 metallo-phosphoesterase other -1 35983 36753
YP_008856846.1 NC_022965_p73 RecB-like protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 42622 43443
YP_008856862.1 NC_022965_p89 hypothetical protein phrog_3256 unknown function unknown function -1 48080 48433
YP_008856791.1 NC_022965_p18 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 13462 13839
YP_008856810.1 NC_022965_p37 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 25999 26388
YP_008856859.1 NC_022965_p86 hypothetical protein phrog_828 unknown function unknown function -1 46857 47066
YP_008856873.1 NC_022965_p100 hypothetical protein phrog_9083 unknown function unknown function -1 50850 50981
YP_008856781.1 NC_022965_p8 hypothetical protein phrog_356 minor tail protein tail 1 4661 5359
YP_008856775.1 NC_022965_p2 hypothetical protein phrog_4415 peptidase other 1 1089 1925
YP_008856844.1 NC_022965_p71 hypothetical protein phrog_642 unknown function unknown function -1 41894 42193
YP_008856876.1 NC_022965_p103 hypothetical protein phrog_1676 unknown function unknown function -1 51315 51647
YP_008856845.1 NC_022965_p72 hypothetical protein phrog_6023 unknown function unknown function -1 42199 42573
YP_008856804.1 NC_022965_p31 minor tail protein phrog_2683 minor tail protein tail 1 22503 23924
YP_008856785.1 NC_022965_p12 terminase large subunit phrog_9 terminase large subunit head and packaging 1 7511 9265
YP_008856820.1 NC_022965_p47 hypothetical protein phrog_690 unknown function unknown function -1 30934 31140
YP_008856795.1 NC_022965_p22 hypothetical protein phrog_123 tail terminator connector 1 14745 15164
YP_008856871.1 NC_022965_p98 hypothetical protein phrog_1392 unknown function unknown function -1 49935 50645
YP_008856861.1 NC_022965_p88 DNA methylase phrog_363 DNA methyltransferase other -1 47556 48083
YP_008856815.1 NC_022965_p42 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 27583 29424
YP_008856875.1 NC_022965_p102 hypothetical protein phrog_1445 unknown function unknown function -1 51202 51282
YP_008856832.1 NC_022965_p59 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 37751 38143
YP_008856779.1 NC_022965_p6 minor tail protein phrog_1260 minor tail protein tail 1 3037 3999
YP_008856803.1 NC_022965_p30 hypothetical protein phrog_404 minor tail protein tail 1 22210 22506
YP_008856778.1 NC_022965_p5 tail protein phrog_226 minor tail protein tail 1 2482 2952
YP_008856807.1 NC_022965_p34 ParA phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism 1 24840 25427
YP_008856789.1 NC_022965_p16 capsid protein phrog_10 major head protein head and packaging 1 12218 13189
YP_008856863.1 NC_022965_p90 hypothetical protein phrog_586 unknown function unknown function -1 48459 48839
YP_008856813.1 NC_022965_p40 hypothetical protein phrog_4371 unknown function unknown function -1 27088 27345
YP_008856821.1 NC_022965_p48 ThyX phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 31142 31870
YP_008856869.1 NC_022965_p96 hypothetical protein phrog_6665 unknown function unknown function -1 49614 49727
YP_008856837.1 NC_022965_p64 hypothetical protein phrog_3369 unknown function unknown function -1 39318 39467
YP_008856792.1 NC_022965_p19 hypothetical protein phrog_830 head-tail connector protein connector 1 13836 14027
YP_008856855.1 NC_022965_p82 hypothetical protein phrog_9760 membrane protein moron, auxiliary metabolic gene and host takeover -1 46005 46130
YP_008856788.1 NC_022965_p15 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 11655 12185
YP_008856783.1 NC_022965_p10 LysA phrog_317 endolysin lysis 1 5832 7043
YP_008856847.1 NC_022965_p74 hypothetical protein phrog_1562 unknown function unknown function -1 43440 43853
YP_008856823.1 NC_022965_p50 hypothetical protein phrog_1872 endonuclease DNA, RNA and nucleotide metabolism -1 32573 32944
YP_008856786.1 NC_022965_p13 portal protein phrog_104 portal protein head and packaging 1 9262 10725
YP_008856800.1 NC_022965_p27 minor tail protein phrog_106 minor tail protein tail 1 18960 19976
YP_008856866.1 NC_022965_p93 hypothetical protein phrog_1946 unknown function unknown function -1 49119 49322
YP_008856790.1 NC_022965_p17 hypothetical protein phrog_748 head-tail connector protein connector 1 13262 13459
YP_008856867.1 NC_022965_p94 hypothetical protein phrog_519 unknown function unknown function -1 49322 49498
YP_008856817.1 NC_022965_p44 hypothetical protein phrog_2094 unknown function unknown function -1 29617 29955
YP_008856868.1 NC_022965_p95 hypothetical protein phrog_2124 unknown function unknown function -1 49486 49614
YP_008856776.1 NC_022965_p3 hypothetical protein phrog_4347 unknown function unknown function 1 1925 2146
YP_008856856.1 NC_022965_p83 SprT-like protein phrog_1006 unknown function unknown function -1 46091 46525
YP_008856843.1 NC_022965_p70 hypothetical protein phrog_520 unknown function unknown function -1 41640 41897
YP_008856838.1 NC_022965_p65 hypothetical protein phrog_397 unknown function unknown function -1 39464 39697
YP_008856801.1 NC_022965_p28 minor tail protein phrog_110 minor tail protein tail 1 19949 21745
YP_008856860.1 NC_022965_p87 DNA methylase phrog_1008 DNA methyltransferase other -1 47087 47734
YP_008856819.1 NC_022965_p46 HTH domain protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 30506 30934
YP_008856841.1 NC_022965_p68 hypothetical protein phrog_1374 unknown function unknown function -1 40571 40750
YP_008856827.1 NC_022965_p54 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 35311 35979
YP_008856793.1 NC_022965_p20 hypothetical protein phrog_320 head closure Hc1 connector 1 14027 14395
YP_008856824.1 NC_022965_p51 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 32944 34998
YP_008856798.1 NC_022965_p25 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15844 16311
YP_008856805.1 NC_022965_p32 Gatase1-like domain protein phrog_2235 minor tail protein tail 1 23935 24219
YP_008856851.1 NC_022965_p78 hypothetical protein phrog_1178 unknown function unknown function -1 45124 45345
YP_008856822.1 NC_022965_p49 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 32023 32568
YP_008856812.1 NC_022965_p39 hypothetical protein phrog_2099 unknown function unknown function -1 26789 27091
YP_008856811.1 NC_022965_p38 hypothetical protein phrog_383 unknown function unknown function -1 26385 26792
YP_008856825.1 NC_022965_p52 hypothetical protein phrog_499 unknown function unknown function -1 34995 35177
YP_008856797.1 NC_022965_p24 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15844 16724
YP_008856831.1 NC_022965_p58 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 37291 37923
YP_008856839.1 NC_022965_p66 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 39817 40203
YP_008856802.1 NC_022965_p29 hypothetical protein phrog_352 minor tail protein tail 1 21761 22213
YP_008856830.1 NC_022965_p57 hypothetical protein phrog_2264 unknown function unknown function -1 37190 37291
YP_008856816.1 NC_022965_p43 hypothetical protein phrog_3812 unknown function unknown function -1 29432 29620
YP_008856818.1 NC_022965_p45 RNA ligase phrog_548 RNA ligase DNA, RNA and nucleotide metabolism -1 29955 30506
YP_008856836.1 NC_022965_p63 hypothetical protein phrog_2187 unknown function unknown function -1 39181 39321
YP_008856849.1 NC_022965_p76 hypothetical protein phrog_1173 unknown function unknown function -1 44626 44778
YP_008856833.1 NC_022965_p60 EndoVII phrog_2633 endonuclease VII DNA, RNA and nucleotide metabolism -1 38136 38546
YP_008856853.1 NC_022965_p80 hypothetical protein phrog_1342 unknown function unknown function -1 45476 45697
YP_008856774.1 NC_022965_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 418 1176
YP_008856809.1 NC_022965_p36 hypothetical protein phrog_5261 unknown function unknown function 1 25751 25912
YP_008856842.1 NC_022965_p69 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 40783 41589
YP_008856864.1 NC_022965_p91 hypothetical protein phrog_5098 unknown function unknown function -1 48836 49033
YP_008856782.1 NC_022965_p9 hypothetical protein phrog_1087 unknown function unknown function 1 5695 5832
YP_008856874.1 NC_022965_p101 hypothetical protein phrog_2499 unknown function unknown function -1 50984 51172
YP_008856857.1 NC_022965_p84 hypothetical protein phrog_855 unknown function unknown function -1 46556 46699
YP_008856784.1 NC_022965_p11 holin phrog_526 holin lysis 1 7043 7474
YP_008856854.1 NC_022965_p81 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 45697 46008
YP_008856870.1 NC_022965_p97 hypothetical protein phrog_3831 unknown function unknown function -1 49729 49938
YP_008856834.1 NC_022965_p61 hypothetical protein phrog_4886 unknown function unknown function -1 38564 38716
YP_008856799.1 NC_022965_p26 tape measure protein phrog_305 tail length tape measure protein tail 1 16717 18933
YP_008856777.1 NC_022965_p4 HNH domain protein phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2143 2439
YP_008856840.1 NC_022965_p67 hypothetical protein phrog_762 unknown function unknown function -1 40200 40556
YP_008856865.1 NC_022965_p92 hypothetical protein phrog_2001 unknown function unknown function -1 49030 49122
YP_008856852.1 NC_022965_p79 hypothetical protein phrog_1477 unknown function unknown function -1 45354 45503
YP_008856780.1 NC_022965_p7 tail protein phrog_819 tail protein tail 1 3999 4664
YP_008856794.1 NC_022965_p21 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 14395 14748
YP_008856835.1 NC_022965_p62 EndoVII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 38709 39209
YP_008856826.1 NC_022965_p53 hypothetical protein phrog_5870 unknown function unknown function -1 35174 35314
YP_008856858.1 NC_022965_p85 hypothetical protein phrog_865 HNH endonuclease DNA, RNA and nucleotide metabolism -1 46696 46854
YP_008856796.1 NC_022965_p23 major tail protein phrog_117 major tail protein tail 1 15193 15795
YP_008856806.1 NC_022965_p33 hypothetical protein phrog_12066 unknown function unknown function 1 24284 24478
YP_008856814.1 NC_022965_p41 hypothetical protein phrog_896 unknown function unknown function -1 27342 27560
YP_008856829.1 NC_022965_p56 hypothetical protein phrog_1167 phosphofructokinase other -1 36750 37193
YP_008856850.1 NC_022965_p77 hypothetical protein phrog_3236 unknown function unknown function -1 44783 45127
YP_008856808.1 NC_022965_p35 ParB phrog_2639 Arc-like repressor transcription regulation 1 25420 25695
YP_008856848.1 NC_022965_p75 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 43875 44426
YP_008856787.1 NC_022965_p14 capsid assembly protease phrog_193 head maturation protease head and packaging 1 10800 11606