Genomic map of Pseudomonas phage PAK_P5 (NC_022966)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022966
Definition
Pseudomonas phage PAK_P5, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Nankokuvirus.
DB of origin
REFSEQ
Length
88135
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
164
%GC
54.72
Number of singletons
5
Number of paralogs
10

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008856886.1 NC_022966_p10 hypothetical protein phrog_4087 unknown function unknown function 1 7027 7647
YP_008856950.1 NC_022966_p74 hypothetical protein phrog_10949 unknown function unknown function 1 47656 47895
YP_008856935.1 NC_022966_p59 hypothetical protein phrog_519 unknown function unknown function 1 39349 39510
YP_008856995.1 NC_022966_p119 hypothetical protein phrog_2176 unknown function unknown function 1 65888 66241
YP_008856911.1 NC_022966_p35 hypothetical protein phrog_12496 unknown function unknown function 1 24937 25356
YP_008857038.1 NC_022966_p162 hypothetical protein phrog_11136 unknown function unknown function 1 85553 85855
YP_008857008.1 NC_022966_p132 hypothetical protein phrog_3230 unknown function unknown function 1 71653 72153
YP_008856937.1 NC_022966_p61 hypothetical protein phrog_1985 HNH endonuclease DNA, RNA and nucleotide metabolism 1 39680 40243
YP_008856899.1 NC_022966_p23 hypothetical protein singleton unknown function unknown function 1 16557 16679
YP_008856887.1 NC_022966_p11 hypothetical protein phrog_205 tail sheath tail 1 7650 8972
YP_008857004.1 NC_022966_p128 hypothetical protein phrog_3483 unknown function unknown function 1 70149 70661
YP_008857009.1 NC_022966_p133 hypothetical protein phrog_7635 unknown function unknown function 1 72236 72493
YP_008856907.1 NC_022966_p31 hypothetical protein phrog_4349 Rz-like spanin lysis 1 23660 24076
YP_008856961.1 NC_022966_p85 hypothetical protein phrog_12189 unknown function unknown function 1 51926 52474
YP_008856929.1 NC_022966_p53 hypothetical protein phrog_12310 unknown function unknown function 1 36320 36505
YP_008856928.1 NC_022966_p52 hypothetical protein phrog_12101 unknown function unknown function 1 35967 36173
YP_008856939.1 NC_022966_p63 hypothetical protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 40465 41382
YP_008856958.1 NC_022966_p82 hypothetical protein phrog_5201 unknown function unknown function 1 51074 51343
YP_008856954.1 NC_022966_p78 hypothetical protein phrog_12962 unknown function unknown function 1 48985 49152
YP_008857020.1 NC_022966_p144 hypothetical protein phrog_14060 unknown function unknown function -1 76064 76255
YP_008857024.1 NC_022966_p148 hypothetical protein phrog_768 DprA-like DNA recombination-mediator protein DNA, RNA and nucleotide metabolism -1 78500 79102
YP_008856880.1 NC_022966_p4 hypothetical protein phrog_4103 unknown function unknown function 1 3328 4215
YP_008857029.1 NC_022966_p153 hypothetical protein phrog_5276 unknown function unknown function -1 81810 82082
YP_008856945.1 NC_022966_p69 hypothetical protein phrog_11821 unknown function unknown function 1 45210 45632
YP_008856878.1 NC_022966_p2 hypothetical protein phrog_113 portal protein head and packaging 1 1430 2917
YP_008856906.1 NC_022966_p30 hypothetical protein phrog_12175 unknown function unknown function 1 23397 23663
YP_008857023.1 NC_022966_p147 hypothetical protein phrog_3360 unknown function unknown function -1 78060 78545
YP_008856984.1 NC_022966_p108 hypothetical protein phrog_9686 unknown function unknown function 1 61171 61332
YP_008856893.1 NC_022966_p17 phage tape measure protein phrog_991 tail length tape measure protein tail 1 11201 13537
YP_008856931.1 NC_022966_p55 hypothetical protein phrog_7018 unknown function unknown function 1 37525 37719
YP_008856917.1 NC_022966_p41 hypothetical protein phrog_13586 unknown function unknown function 1 26670 27035
YP_008856947.1 NC_022966_p71 hypothetical protein phrog_1106 unknown function unknown function 1 46696 47178
YP_008857026.1 NC_022966_p150 hypothetical protein phrog_938 endolysin lysis -1 79357 79920
YP_008856982.1 NC_022966_p106 hypothetical protein phrog_5746 unknown function unknown function 1 60370 60657
YP_008856976.1 NC_022966_p100 hypothetical protein phrog_4273 unknown function unknown function 1 57911 58417
YP_008856920.1 NC_022966_p44 hypothetical protein phrog_9905 unknown function unknown function 1 28267 28638
YP_008856951.1 NC_022966_p75 hypothetical protein phrog_11258 unknown function unknown function 1 47947 48501
YP_008856943.1 NC_022966_p67 hypothetical protein phrog_3506 thymidylate synthase DNA, RNA and nucleotide metabolism 1 42977 43351
YP_008856972.1 NC_022966_p96 hypothetical protein phrog_15407 unknown function unknown function 1 56036 56395
YP_008857039.1 NC_022966_p163 phage terminase large subunit phrog_15848 terminase large subunit head and packaging 1 86738 87556
YP_008857028.1 NC_022966_p152 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 80529 81797
YP_008856956.1 NC_022966_p80 hypothetical protein phrog_12731 unknown function unknown function 1 49699 50178
YP_008856894.1 NC_022966_p18 hypothetical protein phrog_817 tail fiber protein tail 1 13534 14301
YP_008856896.1 NC_022966_p20 hypothetical protein phrog_196 baseplate hub tail 1 14667 15548
YP_008856881.1 NC_022966_p5 hypothetical protein phrog_49 head decoration head and packaging 1 4232 4606
YP_008856915.1 NC_022966_p39 hypothetical protein phrog_14175 unknown function unknown function 1 26193 26393
YP_008856898.1 NC_022966_p22 hypothetical protein singleton unknown function unknown function 1 16310 16546
YP_008856925.1 NC_022966_p49 hypothetical protein phrog_11998 unknown function unknown function 1 31005 31271
YP_008856997.1 NC_022966_p121 hypothetical protein phrog_10655 unknown function unknown function 1 66931 67299
YP_008856924.1 NC_022966_p48 hypothetical protein phrog_12927 unknown function unknown function 1 30469 31005
YP_008856913.1 NC_022966_p37 hypothetical protein phrog_14224 unknown function unknown function 1 25586 25963
YP_008856889.1 NC_022966_p13 hypothetical protein phrog_280 virion structural protein head and packaging 1 9557 10060
YP_008857002.1 NC_022966_p126 hypothetical protein phrog_3956 unknown function unknown function 1 68517 69860
YP_008856986.1 NC_022966_p110 hypothetical protein phrog_4686 unknown function unknown function 1 61589 61813
YP_008856908.1 NC_022966_p32 hypothetical protein phrog_5388 Rz-like spanin lysis 1 24033 24245
YP_008856877.1 NC_022966_p1 phage terminase large subunit phrog_979 terminase large subunit head and packaging 1 1 1419
YP_008857018.1 NC_022966_p142 hypothetical protein phrog_1040 peptidase HslV family other -1 75424 75852
YP_008856910.1 NC_022966_p34 hypothetical protein phrog_3899 unknown function unknown function 1 24541 24828
YP_008856985.1 NC_022966_p109 hypothetical protein phrog_11866 unknown function unknown function 1 61381 61599
YP_008856992.1 NC_022966_p116 hypothetical protein phrog_2176 unknown function unknown function 1 64302 64664
YP_008857016.1 NC_022966_p140 hypothetical protein phrog_10673 unknown function unknown function -1 74865 75101
YP_008856926.1 NC_022966_p50 primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 31320 33272
YP_008857019.1 NC_022966_p143 hypothetical protein phrog_11756 unknown function unknown function -1 75849 76055
YP_008857032.1 NC_022966_p156 hypothetical protein phrog_3948 unknown function unknown function -1 82944 83210
YP_008856987.1 NC_022966_p111 hypothetical protein phrog_11252 unknown function unknown function -1 62339 62476
YP_008856903.1 NC_022966_p27 hypothetical protein phrog_4628 tail fiber assembly tail 1 20971 21348
YP_008856882.1 NC_022966_p6 major capsid protein phrog_29 major head protein head and packaging 1 4617 5672
YP_008856927.1 NC_022966_p51 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 33293 35950
YP_008856975.1 NC_022966_p99 hypothetical protein phrog_11104 unknown function unknown function 1 57293 57826
YP_008856978.1 NC_022966_p102 hypothetical protein phrog_18797 unknown function unknown function 1 58893 59282
YP_008856938.1 NC_022966_p62 hypothetical protein phrog_12267 unknown function unknown function 1 40240 40455
YP_008857001.1 NC_022966_p125 hypothetical protein phrog_9984 unknown function unknown function 1 68131 68520
YP_008857021.1 NC_022966_p145 hypothetical protein phrog_12439 unknown function unknown function -1 76245 76523
YP_008856932.1 NC_022966_p56 hypothetical protein phrog_12381 unknown function unknown function 1 37720 37995
YP_008856933.1 NC_022966_p57 hypothetical protein phrog_7029 unknown function unknown function 1 38040 38273
YP_008856918.1 NC_022966_p42 hypothetical protein phrog_200 lipoprotein other 1 27045 27896
YP_008857035.1 NC_022966_p159 hypothetical protein phrog_23358 unknown function unknown function 1 84455 84631
YP_008856922.1 NC_022966_p46 hypothetical protein phrog_13122 unknown function unknown function 1 29861 30046
YP_008857003.1 NC_022966_p127 hypothetical protein phrog_8303 unknown function unknown function 1 69860 70105
YP_008856942.1 NC_022966_p66 hypothetical protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 42074 42973
YP_008856996.1 NC_022966_p120 hypothetical protein phrog_2176 unknown function unknown function 1 66241 66921
YP_008856990.1 NC_022966_p114 hypothetical protein phrog_2176 unknown function unknown function 1 63613 63951
YP_008856921.1 NC_022966_p45 hypothetical protein phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 28631 29851
YP_008856936.1 NC_022966_p60 hypothetical protein phrog_12564 unknown function unknown function 1 39510 39683
YP_008857022.1 NC_022966_p146 DNA helicase phrog_1967 DNA helicase DNA, RNA and nucleotide metabolism -1 76520 78082
YP_008856962.1 NC_022966_p86 hypothetical protein phrog_9396 unknown function unknown function 1 52555 52953
YP_008856891.1 NC_022966_p15 hypothetical protein singleton unknown function unknown function 1 10700 10969
YP_008857000.1 NC_022966_p124 hypothetical protein phrog_7181 unknown function unknown function 1 67846 68034
YP_008856959.1 NC_022966_p83 hypothetical protein phrog_5289 unknown function unknown function 1 51355 51588
YP_008856900.1 NC_022966_p24 baseplate-related protein phrog_6 baseplate wedge subunit tail 1 16680 18146
YP_008857012.1 NC_022966_p136 hypothetical protein phrog_13737 unknown function unknown function -1 73532 73762
YP_008856974.1 NC_022966_p98 hypothetical protein phrog_6091 unknown function unknown function 1 56972 57217
YP_008856965.1 NC_022966_p89 hypothetical protein phrog_13320 unknown function unknown function 1 53648 53782
YP_008856897.1 NC_022966_p21 hypothetical protein phrog_11 baseplate spike tail 1 15545 16303
YP_008856980.1 NC_022966_p104 hypothetical protein singleton unknown function unknown function 1 59940 60134
YP_008856994.1 NC_022966_p118 hypothetical protein phrog_3483 unknown function unknown function 1 64989 65891
YP_008856998.1 NC_022966_p122 hypothetical protein phrog_10312 unknown function unknown function 1 67292 67516
YP_008856930.1 NC_022966_p54 hypothetical protein phrog_2544 unknown function unknown function 1 36573 37466
YP_008856964.1 NC_022966_p88 hypothetical protein phrog_12996 unknown function unknown function 1 53434 53547
YP_008856983.1 NC_022966_p107 hypothetical protein phrog_18800 unknown function unknown function 1 60739 60993
YP_008856883.1 NC_022966_p7 hypothetical protein phrog_1732 unknown function unknown function 1 5726 6211
YP_008856960.1 NC_022966_p84 hypothetical protein phrog_13123 unknown function unknown function 1 51647 51850
YP_008856981.1 NC_022966_p105 hypothetical protein singleton unknown function unknown function 1 60179 60373
YP_008856971.1 NC_022966_p95 hypothetical protein phrog_15314 unknown function unknown function 1 55534 56025
YP_008856909.1 NC_022966_p33 hypothetical protein phrog_4172 unknown function unknown function 1 24226 24525
YP_008856970.1 NC_022966_p94 hypothetical protein phrog_17916 unknown function unknown function 1 55151 55387
YP_008857017.1 NC_022966_p141 hypothetical protein phrog_10306 unknown function unknown function -1 75098 75421
YP_008856957.1 NC_022966_p81 hypothetical protein phrog_11927 unknown function unknown function 1 50349 50561
YP_008856977.1 NC_022966_p101 hypothetical protein phrog_6605 unknown function unknown function 1 58655 58867
YP_008856949.1 NC_022966_p73 hypothetical protein phrog_2251 unknown function unknown function 1 47424 47654
YP_008857013.1 NC_022966_p137 hypothetical protein phrog_10165 unknown function unknown function -1 73837 74115
YP_008857007.1 NC_022966_p131 hypothetical protein phrog_4029 unknown function unknown function 1 71196 71672
YP_008856973.1 NC_022966_p97 hypothetical protein phrog_15160 unknown function unknown function 1 56421 56888
YP_008856953.1 NC_022966_p77 hypothetical protein phrog_12479 unknown function unknown function 1 48665 48985
YP_008857025.1 NC_022966_p149 hypothetical protein phrog_11519 unknown function unknown function -1 79099 79347
YP_008856934.1 NC_022966_p58 hypothetical protein phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 38273 39361
YP_008856904.1 NC_022966_p28 tail fiber protein phrog_2282 tail fiber protein tail 1 21358 22851
YP_008857010.1 NC_022966_p134 hypothetical protein phrog_5604 unknown function unknown function 1 72477 72626
YP_008857031.1 NC_022966_p155 hypothetical protein phrog_14132 unknown function unknown function -1 82498 82935
YP_008856948.1 NC_022966_p72 hypothetical protein phrog_12627 unknown function unknown function 1 47168 47431
YP_008856969.1 NC_022966_p93 hypothetical protein phrog_12054 unknown function unknown function 1 54749 55027
YP_008857033.1 NC_022966_p157 hypothetical protein phrog_11910 unknown function unknown function -1 83320 83718
YP_008856901.1 NC_022966_p25 hypothetical protein phrog_587 structural protein head and packaging 1 18148 18912
YP_008856955.1 NC_022966_p79 hypothetical protein phrog_11943 unknown function unknown function 1 49205 49702
YP_008856952.1 NC_022966_p76 hypothetical protein phrog_7860 unknown function unknown function 1 48482 48655
YP_008856968.1 NC_022966_p92 hypothetical protein phrog_4025 unknown function unknown function 1 54511 54747
YP_008856905.1 NC_022966_p29 hypothetical protein phrog_2860 endolysin head and packaging 1 22853 23416
YP_008856989.1 NC_022966_p113 hypothetical protein phrog_2176 unknown function unknown function 1 63189 63620
YP_008857011.1 NC_022966_p135 hypothetical protein phrog_18236 unknown function unknown function 1 72999 73262
YP_008857030.1 NC_022966_p154 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 82085 82474
YP_008856895.1 NC_022966_p19 hypothetical protein phrog_349 virion structural protein head and packaging 1 14301 14666
YP_008856944.1 NC_022966_p68 ribonucleotide-diphosphate reductase alpha subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 43344 45200
YP_008857027.1 NC_022966_p151 hypothetical protein phrog_2686 unknown function unknown function -1 79975 80469
YP_008857014.1 NC_022966_p138 hypothetical protein phrog_10597 unknown function unknown function -1 74112 74291
YP_008856967.1 NC_022966_p91 hypothetical protein phrog_13058 unknown function unknown function 1 54248 54511
YP_008856979.1 NC_022966_p103 hypothetical protein phrog_5680 unknown function unknown function 1 59355 59870
YP_008856940.1 NC_022966_p64 hypothetical protein phrog_12364 unknown function unknown function 1 41436 41660
YP_008856941.1 NC_022966_p65 hypothetical protein phrog_4521 unknown function unknown function 1 41657 42070
YP_008857034.1 NC_022966_p158 hypothetical protein phrog_12276 unknown function unknown function -1 83715 84263
YP_008856884.1 NC_022966_p8 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 6189 6656
YP_008856966.1 NC_022966_p90 hypothetical protein phrog_12567 unknown function unknown function 1 53767 54159
YP_008856890.1 NC_022966_p14 hypothetical protein phrog_280 virion structural protein head and packaging 1 10060 10563
YP_008856888.1 NC_022966_p12 hypothetical protein phrog_280 virion structural protein head and packaging 1 8983 9504
YP_008856914.1 NC_022966_p38 hypothetical protein phrog_16562 unknown function unknown function 1 25969 26190
YP_008856892.1 NC_022966_p16 hypothetical protein phrog_4625 unknown function unknown function 1 10990 11211
YP_008856999.1 NC_022966_p123 hypothetical protein phrog_2614 unknown function unknown function 1 67503 67817
YP_008856879.1 NC_022966_p3 hypothetical protein phrog_1530 DNA methyltransferase other 1 2919 3335
YP_008856902.1 NC_022966_p26 tail fiber protein phrog_2282 tail fiber protein tail 1 18922 20925
YP_008856946.1 NC_022966_p70 ribonucleotide reductase beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 45616 46635
YP_008856919.1 NC_022966_p43 hypothetical protein phrog_13454 unknown function unknown function 1 27945 28265
YP_008857015.1 NC_022966_p139 hypothetical protein phrog_10851 unknown function unknown function -1 74288 74863
YP_008857037.1 NC_022966_p161 hypothetical protein phrog_13098 unknown function unknown function 1 85100 85348
YP_008856923.1 NC_022966_p47 hypothetical protein phrog_13021 unknown function unknown function 1 30087 30482
YP_008857040.1 NC_022966_p164 hypothetical protein phrog_1954 virion structural protein head and packaging 1 87629 88054
YP_008856991.1 NC_022966_p115 hypothetical protein phrog_2176 unknown function unknown function 1 63941 64315
YP_008856885.1 NC_022966_p9 hypothetical protein phrog_939 head protein head and packaging 1 6656 7027
YP_008857036.1 NC_022966_p160 hypothetical protein phrog_3900 unknown function unknown function 1 84742 85098
YP_008857005.1 NC_022966_p129 hypothetical protein phrog_343 unknown function unknown function 1 70651 70977
YP_008857006.1 NC_022966_p130 hypothetical protein phrog_15269 unknown function unknown function 1 70978 71199
YP_008856993.1 NC_022966_p117 hypothetical protein phrog_2176 unknown function unknown function 1 64651 64992
YP_008856916.1 NC_022966_p40 hypothetical protein phrog_4794 unknown function unknown function 1 26404 26670
YP_008856988.1 NC_022966_p112 hypothetical protein phrog_27376 unknown function unknown function -1 62697 62831
YP_008856912.1 NC_022966_p36 hypothetical protein phrog_12190 unknown function unknown function 1 25380 25589
YP_008856963.1 NC_022966_p87 hypothetical protein phrog_12145 unknown function unknown function 1 53020 53409