Genomic map of Pseudomonas phage PAK_P3 (NC_022970)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022970
Definition
Pseudomonas phage PAK_P3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Nankokuvirus.
DB of origin
REFSEQ
Length
88097
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
165
%GC
54.82
Number of singletons
3
Number of paralogs
10

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008857721.1 NC_022970_p86 hypothetical protein phrog_9396 unknown function unknown function 1 52705 53103
YP_008857787.1 NC_022970_p152 hypothetical protein phrog_2686 unknown function unknown function -1 79909 80409
YP_008857757.1 NC_022970_p121 hypothetical protein phrog_10655 unknown function unknown function 1 67487 67855
YP_008857791.1 NC_022970_p156 hypothetical protein phrog_14132 unknown function unknown function -1 82441 82878
YP_008857788.1 NC_022970_p153 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 80469 81740
YP_008857746.1 NC_022970_p111 hypothetical protein phrog_4686 unknown function unknown function 1 62255 62407
YP_008857657.1 NC_022970_p22 hypothetical protein phrog_120 baseplate wedge subunit tail 1 16304 16669
YP_008857797.1 NC_022970_p162 hypothetical protein phrog_13098 unknown function unknown function 1 85062 85310
YP_008857701.1 NC_022970_p66 hypothetical protein phrog_3506 thymidylate synthase DNA, RNA and nucleotide metabolism 1 42985 43359
YP_008857649.2 NC_022970_p14 hypothetical protein phrog_280 virion structural protein head and packaging 1 10159 10563
YP_008857785.1 NC_022970_p150 hypothetical protein phrog_11519 unknown function unknown function -1 79035 79283
YP_008857760.1 NC_022970_p124 hypothetical protein phrog_7181 unknown function unknown function 1 68402 68590
YP_008857781.1 NC_022970_p146 hypothetical protein phrog_12439 unknown function unknown function -1 76181 76459
YP_008857766.1 NC_022970_p130 hypothetical protein phrog_343 unknown function unknown function 1 71317 71643
YP_008857686.1 NC_022970_p51 hypothetical protein phrog_12101 unknown function unknown function 1 35975 36181
YP_008857753.1 NC_022970_p117 hypothetical protein phrog_2176 unknown function unknown function 1 65207 65548
YP_008857689.1 NC_022970_p54 hypothetical protein phrog_7018 unknown function unknown function 1 37533 37727
YP_008857765.1 NC_022970_p129 hypothetical protein phrog_3483 unknown function unknown function 1 70815 71324
YP_008857733.1 NC_022970_p98 hypothetical protein phrog_6091 unknown function unknown function 1 57123 57368
YP_008857751.1 NC_022970_p115 hypothetical protein phrog_2176 unknown function unknown function 1 64491 64877
YP_008857759.1 NC_022970_p123 hypothetical protein phrog_2614 unknown function unknown function 1 68059 68373
YP_008857718.1 NC_022970_p83 hypothetical protein phrog_5289 unknown function unknown function 1 51505 51738
YP_008857747.1 NC_022970_p112 hypothetical protein singleton unknown function unknown function 1 62602 62817
YP_008857640.1 NC_022970_p5 hypothetical protein phrog_49 head decoration head and packaging 1 4232 4606
YP_008857673.1 NC_022970_p38 hypothetical protein phrog_14175 unknown function unknown function 1 26201 26401
YP_008857789.1 NC_022970_p154 hypothetical protein phrog_5276 unknown function unknown function -1 81753 82025
YP_008857724.1 NC_022970_p89 hypothetical protein phrog_13320 unknown function unknown function 1 53798 53932
YP_008857645.1 NC_022970_p10 hypothetical protein phrog_4087 unknown function unknown function 1 7027 7647
YP_008857790.1 NC_022970_p155 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 82028 82417
YP_008857637.1 NC_022970_p2 hypothetical protein phrog_113 portal protein head and packaging 1 1430 2917
YP_008857641.1 NC_022970_p6 major capsid protein phrog_29 major head protein head and packaging 1 4617 5672
YP_008857700.1 NC_022970_p65 hypothetical protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 42082 42981
YP_008857690.1 NC_022970_p55 hypothetical protein phrog_12381 unknown function unknown function 1 37728 38003
YP_008857720.1 NC_022970_p85 hypothetical protein phrog_12189 unknown function unknown function 1 52076 52624
YP_008857775.1 NC_022970_p140 hypothetical protein phrog_10851 unknown function unknown function -1 74236 74811
YP_008857732.1 NC_022970_p97 hypothetical protein phrog_15160 unknown function unknown function 1 56572 57039
YP_008857705.1 NC_022970_p70 hypothetical protein phrog_1106 unknown function unknown function 1 46705 47187
YP_008857711.1 NC_022970_p76 hypothetical protein phrog_12479 unknown function unknown function 1 48677 48997
YP_008857677.1 NC_022970_p42 hypothetical protein phrog_13454 unknown function unknown function 1 27953 28273
YP_008857693.1 NC_022970_p58 hypothetical protein phrog_519 unknown function unknown function 1 39357 39518
YP_008857738.1 NC_022970_p103 hypothetical protein phrog_5680 unknown function unknown function 1 59396 59911
YP_008857680.1 NC_022970_p45 hypothetical protein phrog_13122 unknown function unknown function 1 29869 30054
YP_008857777.1 NC_022970_p142 hypothetical protein phrog_10306 unknown function unknown function -1 75037 75372
YP_008857647.1 NC_022970_p12 hypothetical protein phrog_280 virion structural protein head and packaging 1 8983 9504
YP_008857678.1 NC_022970_p43 hypothetical protein phrog_9905 unknown function unknown function 1 28275 28646
YP_008857722.1 NC_022970_p87 hypothetical protein phrog_12145 unknown function unknown function 1 53170 53559
YP_008857713.1 NC_022970_p78 hypothetical protein phrog_11943 unknown function unknown function 1 49217 49714
YP_008857682.1 NC_022970_p47 hypothetical protein phrog_12927 unknown function unknown function 1 30477 31013
YP_008857786.1 NC_022970_p151 cell wall hydrolase domain protein phrog_938 endolysin lysis -1 79293 79856
YP_008857652.1 NC_022970_p17 tape measure protein phrog_991 tail length tape measure protein tail 1 11195 13531
YP_008857749.1 NC_022970_p113 hypothetical protein phrog_2176 unknown function unknown function 1 63739 64170
YP_008857665.1 NC_022970_p30 hypothetical protein phrog_4349 Rz-like spanin lysis 1 23668 24084
YP_008857697.1 NC_022970_p62 hypothetical protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 40473 41390
YP_008857699.1 NC_022970_p64 hypothetical protein phrog_4521 unknown function unknown function 1 41665 42078
YP_008857773.1 NC_022970_p138 hypothetical protein phrog_10165 unknown function unknown function -1 73785 74063
YP_008857762.1 NC_022970_p126 hypothetical protein phrog_3956 unknown function unknown function 1 69073 70284
YP_008857763.1 NC_022970_p127 hypothetical protein singleton unknown function unknown function 1 70277 70522
YP_008857726.1 NC_022970_p91 hypothetical protein phrog_13058 unknown function unknown function 1 54398 54661
YP_008857795.1 NC_022970_p160 hypothetical protein phrog_23358 unknown function unknown function 1 84417 84593
YP_008857769.1 NC_022970_p134 hypothetical protein phrog_5604 unknown function unknown function 1 72425 72574
YP_008857712.1 NC_022970_p77 hypothetical protein phrog_12962 unknown function unknown function 1 48997 49164
YP_008857754.1 NC_022970_p118 hypothetical protein phrog_3483 unknown function unknown function 1 65545 66447
YP_008857671.1 NC_022970_p36 hypothetical protein phrog_14224 unknown function unknown function 1 25594 25971
YP_008857730.1 NC_022970_p95 hypothetical protein phrog_15314 unknown function unknown function 1 55685 56176
YP_008857745.1 NC_022970_p110 hypothetical protein phrog_11866 unknown function unknown function 1 61986 62204
YP_008857661.1 NC_022970_p26 hypothetical protein phrog_4628 tail fiber assembly tail 1 20979 21356
YP_008857743.1 NC_022970_p108 hypothetical protein phrog_38746 unknown function unknown function 1 61347 61520
YP_008857646.1 NC_022970_p11 hypothetical protein phrog_205 tail sheath tail 1 7650 8972
YP_008857792.1 NC_022970_p157 hypothetical protein phrog_3948 unknown function unknown function -1 82887 83153
YP_008857653.1 NC_022970_p18 hypothetical protein phrog_817 tail fiber protein tail 1 13528 14295
YP_008857670.1 NC_022970_p35 hypothetical protein phrog_12190 unknown function unknown function 1 25388 25597
YP_008857674.1 NC_022970_p39 hypothetical protein phrog_4794 unknown function unknown function 1 26412 26678
YP_008857793.1 NC_022970_p158 hypothetical protein phrog_11910 unknown function unknown function -1 83264 83662
YP_008857744.1 NC_022970_p109 hypothetical protein phrog_35717 unknown function unknown function 1 61564 61839
YP_008857691.1 NC_022970_p56 hypothetical protein phrog_7029 unknown function unknown function 1 38015 38281
YP_008857739.1 NC_022970_p104 hypothetical protein phrog_16815 unknown function unknown function 1 59981 60163
YP_008857703.1 NC_022970_p68 hypothetical protein phrog_11821 unknown function unknown function 1 45218 45583
YP_008857675.1 NC_022970_p40 hypothetical protein phrog_13586 unknown function unknown function 1 26678 27043
YP_008857742.1 NC_022970_p107 hypothetical protein phrog_4310 unknown function unknown function 1 61102 61302
YP_008857783.1 NC_022970_p148 hypothetical protein phrog_3360 unknown function unknown function -1 77996 78481
YP_008857685.1 NC_022970_p50 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 33301 35958
YP_008857735.1 NC_022970_p100 hypothetical protein phrog_4273 unknown function unknown function 1 58063 58578
YP_008857709.1 NC_022970_p74 hypothetical protein phrog_11258 unknown function unknown function 1 47959 48513
YP_008857780.1 NC_022970_p145 hypothetical protein phrog_14060 unknown function unknown function -1 76003 76191
YP_008857741.1 NC_022970_p106 hypothetical protein phrog_32070 unknown function unknown function 1 60578 61036
YP_008857734.1 NC_022970_p99 hypothetical protein phrog_11104 unknown function unknown function 1 57445 57978
YP_008857698.1 NC_022970_p63 hypothetical protein phrog_12364 unknown function unknown function 1 41444 41668
YP_008857660.1 NC_022970_p25 tail fiber protein phrog_2282 tail fiber protein tail 1 18912 20933
YP_008857776.1 NC_022970_p141 hypothetical protein phrog_10673 unknown function unknown function -1 74813 75040
YP_008857770.1 NC_022970_p135 hypothetical protein phrog_20444 unknown function unknown function 1 72571 72939
YP_008857683.1 NC_022970_p48 hypothetical protein phrog_11998 unknown function unknown function 1 31013 31279
YP_008857704.1 NC_022970_p69 ribonucleotide reductase beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 45625 46644
YP_009252177.1 NC_022970_p133 hypothetical protein singleton unknown function unknown function 1 72207 72341
YP_008857702.1 NC_022970_p67 ribonucleotide-diphosphate reductase alpha subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 43352 45208
YP_008857800.1 NC_022970_p165 hypothetical protein phrog_1954 virion structural protein head and packaging 1 87590 88015
YP_008857779.1 NC_022970_p144 hypothetical protein phrog_11756 unknown function unknown function -1 75788 75994
YP_008857654.1 NC_022970_p19 hypothetical protein phrog_349 virion structural protein head and packaging 1 14295 14660
YP_008857715.1 NC_022970_p80 hypothetical protein phrog_11927 unknown function unknown function 1 50358 50570
YP_008857708.1 NC_022970_p73 hypothetical protein phrog_10949 unknown function unknown function 1 47665 47907
YP_008857731.1 NC_022970_p96 hypothetical protein phrog_15407 unknown function unknown function 1 56187 56546
YP_008857771.1 NC_022970_p136 hypothetical protein phrog_18236 unknown function unknown function 1 72947 73210
YP_008857687.1 NC_022970_p52 hypothetical protein phrog_12310 unknown function unknown function 1 36328 36513
YP_008857643.1 NC_022970_p8 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 6189 6656
YP_008857642.1 NC_022970_p7 hypothetical protein phrog_1732 unknown function unknown function 1 5726 6211
YP_008857727.1 NC_022970_p92 hypothetical protein phrog_4025 unknown function unknown function 1 54661 54897
YP_008857774.1 NC_022970_p139 hypothetical protein phrog_10597 unknown function unknown function -1 74060 74239
YP_008857663.1 NC_022970_p28 hypothetical protein phrog_2860 endolysin head and packaging 1 22861 23424
YP_008857796.1 NC_022970_p161 hypothetical protein phrog_3900 unknown function unknown function 1 84704 85060
YP_008857684.1 NC_022970_p49 primase/helicase protein phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 31328 33280
YP_008857681.1 NC_022970_p46 hypothetical protein phrog_13021 unknown function unknown function 1 30095 30490
YP_008857696.1 NC_022970_p61 hypothetical protein phrog_12267 unknown function unknown function 1 40248 40463
YP_008857695.1 NC_022970_p60 hypothetical protein phrog_1985 HNH endonuclease DNA, RNA and nucleotide metabolism 1 39688 40251
YP_008857714.1 NC_022970_p79 hypothetical protein phrog_12731 unknown function unknown function 1 49711 50187
YP_008857636.1 NC_022970_p1 terminase large subunit phrog_979 terminase large subunit head and packaging 1 1 1419
YP_008857692.1 NC_022970_p57 exodeoxyribonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 38281 39369
YP_008857648.2 NC_022970_p13 hypothetical protein phrog_280 virion structural protein head and packaging 1 9689 10060
YP_008857772.1 NC_022970_p137 hypothetical protein phrog_13737 unknown function unknown function -1 73480 73710
YP_008857659.1 NC_022970_p24 hypothetical protein phrog_587 structural protein head and packaging 1 18138 18902
YP_008857740.1 NC_022970_p105 hypothetical protein phrog_5746 unknown function unknown function 1 60208 60495
YP_008857756.1 NC_022970_p120 hypothetical protein phrog_2176 unknown function unknown function 1 66797 67477
YP_008857794.1 NC_022970_p159 hypothetical protein phrog_12276 unknown function unknown function -1 83659 84225
YP_008857737.1 NC_022970_p102 hypothetical protein phrog_18797 unknown function unknown function 1 58934 59323
YP_008857752.1 NC_022970_p116 hypothetical protein phrog_2176 unknown function unknown function 1 64864 65220
YP_008857764.1 NC_022970_p128 hypothetical protein phrog_8303 unknown function unknown function 1 70522 70767
YP_008857717.1 NC_022970_p82 hypothetical protein phrog_6353 unknown function unknown function 1 51362 51505
YP_008857651.1 NC_022970_p16 hypothetical protein phrog_4625 unknown function unknown function 1 10984 11205
YP_008857729.1 NC_022970_p94 hypothetical protein phrog_17916 unknown function unknown function 1 55301 55537
YP_008857679.1 NC_022970_p44 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 28639 29859
YP_008857761.1 NC_022970_p125 hypothetical protein phrog_9984 unknown function unknown function 1 68687 69076
YP_008857716.1 NC_022970_p81 hypothetical protein phrog_5201 unknown function unknown function 1 51081 51350
YP_008857672.1 NC_022970_p37 hypothetical protein phrog_16562 unknown function unknown function 1 25977 26198
YP_008857755.1 NC_022970_p119 hypothetical protein phrog_2176 unknown function unknown function 1 66444 66797
YP_008857736.1 NC_022970_p101 hypothetical protein phrog_6605 unknown function unknown function 1 58696 58908
YP_008857644.1 NC_022970_p9 hypothetical protein phrog_939 head protein head and packaging 1 6656 7027
YP_008857778.1 NC_022970_p143 hypothetical protein phrog_1040 peptidase HslV family other -1 75363 75791
YP_008857710.1 NC_022970_p75 hypothetical protein phrog_7860 unknown function unknown function 1 48494 48667
YP_008857666.1 NC_022970_p31 hypothetical protein phrog_5388 Rz-like spanin lysis 1 24041 24253
YP_008857719.1 NC_022970_p84 hypothetical protein phrog_13123 unknown function unknown function 1 51797 52000
YP_008857658.1 NC_022970_p23 base plate related protein phrog_6 baseplate wedge subunit tail 1 16670 18136
YP_008857707.1 NC_022970_p72 hypothetical protein phrog_2251 unknown function unknown function 1 47433 47663
YP_008857768.1 NC_022970_p132 hypothetical protein phrog_368 unknown function unknown function 1 71858 72190
YP_008857758.1 NC_022970_p122 hypothetical protein phrog_10312 unknown function unknown function 1 67848 68072
YP_008857669.1 NC_022970_p34 hypothetical protein phrog_12496 unknown function unknown function 1 24945 25364
YP_008857767.1 NC_022970_p131 hypothetical protein phrog_15269 unknown function unknown function 1 71640 71861
YP_008857798.1 NC_022970_p163 hypothetical protein phrog_11136 unknown function unknown function 1 85515 85817
YP_008857694.1 NC_022970_p59 hypothetical protein phrog_12564 unknown function unknown function 1 39518 39691
YP_008857723.1 NC_022970_p88 hypothetical protein phrog_12996 unknown function unknown function 1 53584 53697
YP_008857676.1 NC_022970_p41 hypothetical protein phrog_200 lipoprotein other 1 27053 27904
YP_008857656.1 NC_022970_p21 baseplate assembly protein phrog_11 baseplate spike tail 1 15539 16297
YP_008857725.1 NC_022970_p90 hypothetical protein phrog_12567 unknown function unknown function 1 53917 54309
YP_008857728.1 NC_022970_p93 hypothetical protein phrog_12054 unknown function unknown function 1 54899 55177
YP_008857662.1 NC_022970_p27 tail fiber protein phrog_2282 tail fiber protein tail 1 21366 22859
YP_008857799.1 NC_022970_p164 hypothetical protein phrog_15848 terminase large subunit head and packaging 1 86699 87517
YP_008857639.1 NC_022970_p4 hypothetical protein phrog_4103 unknown function unknown function 1 3328 4215
YP_008857784.1 NC_022970_p149 hypothetical protein phrog_768 DprA-like DNA recombination-mediator protein DNA, RNA and nucleotide metabolism -1 78436 79038
YP_008857782.1 NC_022970_p147 DNA helicase phrog_1967 DNA helicase DNA, RNA and nucleotide metabolism -1 76456 78018
YP_008857688.1 NC_022970_p53 hypothetical protein phrog_2544 unknown function unknown function 1 36581 37474
YP_008857655.1 NC_022970_p20 hypothetical protein phrog_196 baseplate hub tail 1 14661 15542
YP_008857650.1 NC_022970_p15 hypothetical protein phrog_1613 tail assembly chaperone tail 1 10577 10963
YP_008857638.1 NC_022970_p3 hypothetical protein phrog_1530 DNA methyltransferase other 1 2919 3335
YP_008857706.1 NC_022970_p71 hypothetical protein phrog_12627 unknown function unknown function 1 47177 47440
YP_008857750.1 NC_022970_p114 hypothetical protein phrog_2176 unknown function unknown function 1 64163 64501
YP_008857667.1 NC_022970_p32 hypothetical protein phrog_4172 unknown function unknown function 1 24234 24533
YP_008857664.1 NC_022970_p29 hypothetical protein phrog_12175 unknown function unknown function 1 23405 23671
YP_008857668.1 NC_022970_p33 hypothetical protein phrog_3899 unknown function unknown function 1 24549 24836