Genomic map of Pseudomonas phage phiIBB-PAA2 (NC_022971)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022971
Definition
Pseudomonas phage phiIBB-PAA2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Bruynoghevirus.
DB of origin
REFSEQ
Length
45344
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
69
%GC
52.32
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008857808.1 NC_022971_p8 hypothetical protein phrog_14185 unknown function unknown function 1 3086 3361
YP_008857858.1 NC_022971_p58 hypothetical protein phrog_5795 tail protein tail -1 35592 36239
YP_008857805.1 NC_022971_p5 hypothetical protein phrog_12073 unknown function unknown function 1 2537 2719
YP_008857810.1 NC_022971_p10 hypothetical protein phrog_11682 unknown function unknown function 1 3514 3660
YP_008857817.1 NC_022971_p17 hypothetical protein phrog_20462 unknown function unknown function 1 5485 5937
YP_008857833.1 NC_022971_p33 hypothetical protein phrog_9813 unknown function unknown function 1 17109 17300
YP_008857863.1 NC_022971_p63 major head protein phrog_1328 major head protein head and packaging -1 37662 38615
YP_008857819.1 NC_022971_p19 hypothetical protein phrog_9504 unknown function unknown function 1 6312 7331
YP_008857845.1 NC_022971_p45 hypothetical protein phrog_221 metallo-phosphoesterase other 1 23927 24688
YP_008857846.1 NC_022971_p46 hypothetical protein phrog_9960 unknown function unknown function 1 24685 24903
YP_008857821.1 NC_022971_p21 hypothetical protein phrog_3815 COOH.NH2 ligase other 1 8303 9103
YP_008857806.1 NC_022971_p6 hypothetical protein singleton unknown function unknown function 1 2719 2841
YP_008857809.1 NC_022971_p9 hypothetical protein phrog_16829 unknown function unknown function 1 3372 3527
YP_008857843.1 NC_022971_p43 5'-3' exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 21896 22780
YP_008857855.1 NC_022971_p55 hypothetical protein phrog_7642 unknown function unknown function -1 32925 33359
YP_008857826.1 NC_022971_p26 hypothetical protein phrog_2599 ribosomal protein S6 glutaminyl transferase moron, auxiliary metabolic gene and host takeover 1 12722 13603
YP_008857816.1 NC_022971_p16 hypothetical protein phrog_11110 unknown function unknown function 1 5268 5495
YP_008857865.2 NC_022971_p65 hypothetical protein phrog_8161 unknown function unknown function -1 39626 39868
YP_008857813.1 NC_022971_p13 hypothetical protein phrog_11608 unknown function unknown function 1 4185 4448
YP_008857829.1 NC_022971_p29 primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 14379 16088
YP_008857840.1 NC_022971_p40 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 20605 21159
YP_008857838.1 NC_022971_p38 DNA polymerase part II phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 18509 20146
YP_008857823.1 NC_022971_p23 hypothetical protein phrog_7631 amidoligase enzyme other 1 9641 10816
YP_008857861.1 NC_022971_p61 virion protein phrog_2941 virion structural protein head and packaging -1 36663 37289
YP_008857807.1 NC_022971_p7 hypothetical protein phrog_8365 unknown function unknown function 1 2851 3084
YP_008857848.1 NC_022971_p48 hypothetical protein phrog_8402 unknown function unknown function 1 25103 25309
YP_008857832.1 NC_022971_p32 hypothetical protein phrog_12255 unknown function unknown function 1 16895 17128
YP_008857869.1 NC_022971_p69 hypothetical protein phrog_51 terminase small subunit head and packaging -1 43869 44327
YP_008857820.1 NC_022971_p20 hypothetical protein phrog_7973 unknown function unknown function 1 7350 8306
YP_008857851.1 NC_022971_p51 virion protein phrog_6958 virion structural protein head and packaging -1 26786 29953
YP_008857864.1 NC_022971_p64 scaffolding protein phrog_3927 head scaffolding protein head and packaging -1 38634 39626
YP_008857834.1 NC_022971_p34 hypothetical protein phrog_9555 unknown function unknown function 1 17290 17451
YP_008857828.1 NC_022971_p28 hypothetical protein phrog_8197 unknown function unknown function 1 14001 14378
YP_008857825.1 NC_022971_p25 hypothetical protein phrog_9335 unknown function unknown function 1 12370 12591
YP_008857835.1 NC_022971_p35 holin phrog_7045 holin lysis 1 17442 17726
YP_008857841.1 NC_022971_p41 hypothetical protein phrog_5033 endolysin; inhibits RNA polymerase lysis 1 21137 21640
YP_008857818.1 NC_022971_p18 hypothetical protein phrog_14798 unknown function unknown function 1 5944 6273
YP_008857811.1 NC_022971_p11 hypothetical protein phrog_10516 unknown function unknown function 1 3669 3914
YP_008857852.1 NC_022971_p52 virion protein phrog_7725 virion structural protein head and packaging -1 30104 31618
YP_008857812.1 NC_022971_p12 hypothetical protein phrog_9861 unknown function unknown function 1 3919 4185
YP_008857849.1 NC_022971_p49 hypothetical protein phrog_8259 unknown function unknown function -1 25516 25872
YP_008857859.1 NC_022971_p59 hypothetical protein phrog_8140 unknown function unknown function -1 36229 36477
YP_008857866.1 NC_022971_p66 portal protein phrog_1216 portal protein head and packaging -1 39871 41991
YP_008857857.1 NC_022971_p57 hypothetical protein phrog_3287 virion structural protein head and packaging -1 34042 35583
YP_008857862.1 NC_022971_p62 hypothetical protein phrog_3982 unknown function unknown function -1 37293 37613
YP_008857830.1 NC_022971_p30 DNA polymerase part I phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 16072 16581
YP_008857802.1 NC_022971_p2 hypothetical protein phrog_1448 unknown function unknown function 1 1447 1929
YP_008857844.1 NC_022971_p44 hypothetical protein phrog_7967 unknown function unknown function 1 22755 23741
YP_008857867.1 NC_022971_p67 terminase large subunit phrog_2 terminase large subunit head and packaging -1 41991 43439
YP_008857850.1 NC_022971_p50 virion protein phrog_8295 virion structural protein head and packaging -1 25887 26774
YP_008857827.1 NC_022971_p27 hypothetical protein phrog_2520 gamma-glutamyl cyclotransferase moron, auxiliary metabolic gene and host takeover 1 13603 14001
YP_008857824.1 NC_022971_p24 L-glutamine-D-fructose-6-phosphate amidotransferase phrog_4736 L-glutamine-D-fructose-6-phosphate aminotransferase other 1 10828 12360
YP_008857839.1 NC_022971_p39 hypothetical protein phrog_5018 unknown function unknown function 1 20128 20535
YP_008857822.1 NC_022971_p22 hypothetical protein phrog_4877 unknown function unknown function 1 9096 9665
YP_008857803.1 NC_022971_p3 hypothetical protein phrog_9596 unknown function unknown function 1 1987 2220
YP_008857854.1 NC_022971_p54 hypothetical protein phrog_7477 unknown function unknown function -1 32003 32944
YP_008857804.1 NC_022971_p4 hypothetical protein phrog_10887 unknown function unknown function 1 2217 2357
YP_008857853.1 NC_022971_p53 virion protein phrog_9927 virion structural protein head and packaging -1 31623 32003
YP_008857860.1 NC_022971_p60 hypothetical protein phrog_402 unknown function unknown function -1 36461 36652
YP_008857814.1 NC_022971_p14 hypothetical protein phrog_4955 unknown function unknown function 1 4448 4717
YP_008857837.1 NC_022971_p37 hypothetical protein phrog_9754 unknown function unknown function 1 18311 18508
YP_008857801.1 NC_022971_p1 hypothetical protein phrog_14276 unknown function unknown function 1 1138 1443
YP_008857842.1 NC_022971_p42 hypothetical protein phrog_8565 unknown function unknown function 1 21612 21896
YP_008857836.1 NC_022971_p36 hypothetical protein phrog_7819 tail length tape measure protein tail 1 17797 18306
YP_008857868.1 NC_022971_p68 lysozyme phrog_7 endolysin lysis -1 43439 43837
YP_008857847.1 NC_022971_p47 hypothetical protein phrog_2251 unknown function unknown function 1 24907 25116
YP_008857856.1 NC_022971_p56 hypothetical protein phrog_8092 unknown function unknown function -1 33356 34045
YP_008857831.1 NC_022971_p31 hypothetical protein phrog_4590 unknown function unknown function 1 16563 16859
YP_008857815.1 NC_022971_p15 hypothetical protein phrog_8299 unknown function unknown function 1 4717 5142