Genomic map of Mycobacterium phage Conspiracy (NC_022973)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022973
Definition
Mycobacterium phage Conspiracy, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
REFSEQ
Length
50755
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
86
%GC
60.61
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008857992.1 NC_022973_p55 hypothetical protein phrog_6549 unknown function unknown function -1 38848 39066
YP_008857974.1 NC_022973_p37 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 28502 30346
YP_008857978.1 NC_022973_p41 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 31774 32307
YP_008857960.1 NC_022973_p23 minor tail protein phrog_110 minor tail protein tail 1 19564 21363
YP_008857948.1 NC_022973_p11 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 10081 10590
YP_008858005.1 NC_022973_p68 hypothetical protein phrog_5957 unknown function unknown function -1 42956 43246
YP_008858000.1 NC_022973_p63 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 40365 40754
YP_008858020.1 NC_022973_p83 hypothetical protein phrog_6093 unknown function unknown function -1 48444 48590
YP_008857939.1 NC_022973_p2 minor tail subunit phrog_226 minor tail protein tail 1 872 1321
YP_008857958.1 NC_022973_p21 tape measure protein phrog_305 tail length tape measure protein tail 1 15069 18410
YP_008857970.1 NC_022973_p33 hypothetical protein phrog_542 unknown function unknown function -1 27060 27260
YP_008857986.1 NC_022973_p49 hypothetical protein phrog_4195 unknown function unknown function -1 36747 37166
YP_008858011.1 NC_022973_p74 hypothetical protein phrog_5561 unknown function unknown function -1 45015 45200
YP_008857941.1 NC_022973_p4 hypothetical protein phrog_1197 tail protein tail 1 2386 3441
YP_008858009.1 NC_022973_p72 hypothetical protein phrog_5066 unknown function unknown function -1 44596 44853
YP_008857968.1 NC_022973_p31 cytidine deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 26372 26881
YP_008858016.1 NC_022973_p79 hypothetical protein phrog_2124 unknown function unknown function -1 46497 46637
YP_008857984.1 NC_022973_p47 phosphoesterase phrog_221 metallo-phosphoesterase other -1 35516 36286
YP_008858023.1 NC_022973_p86 hypothetical protein phrog_8568 unknown function unknown function -1 50030 50263
YP_008857967.1 NC_022973_p30 DNA binding domain protein phrog_733 excisionase integration and excision 1 25853 26272
YP_008857961.1 NC_022973_p24 hypothetical protein phrog_352 minor tail protein tail 1 21377 21841
YP_008858004.1 NC_022973_p67 RecB-like nuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 42144 42959
YP_008857952.1 NC_022973_p15 hypothetical protein phrog_320 head closure Hc1 connector 1 12135 12497
YP_008857950.1 NC_022973_p13 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 11624 11998
YP_008857989.1 NC_022973_p52 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 37713 38372
YP_008857982.1 NC_022973_p45 hypothetical protein phrog_5897 unknown function unknown function -1 34798 34893
YP_008857980.1 NC_022973_p43 hypothetical protein phrog_499 unknown function unknown function -1 34399 34569
YP_008857943.1 NC_022973_p6 LysA phrog_1512 endolysin lysis 1 4262 5176
YP_008857996.1 NC_022973_p59 hypothetical protein phrog_13032 unknown function unknown function -1 39900 40055
YP_008858015.1 NC_022973_p78 hypothetical protein phrog_1477 unknown function unknown function -1 46375 46500
YP_008857963.1 NC_022973_p26 hypothetical protein phrog_404 minor tail protein tail 1 22133 22453
YP_008858007.1 NC_022973_p70 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 44057 44353
YP_008857990.1 NC_022973_p53 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38182 38592
YP_008857998.1 NC_022973_p61 hypothetical protein phrog_6893 unknown function unknown function -1 40136 40219
YP_008858021.1 NC_022973_p84 hypothetical protein phrog_6340 unknown function unknown function -1 48593 49006
YP_008857946.1 NC_022973_p9 portal protein phrog_104 portal protein head and packaging 1 7757 9190
YP_008858010.1 NC_022973_p73 hypothetical protein phrog_6322 unknown function unknown function -1 44850 45002
YP_008858022.1 NC_022973_p85 hypothetical protein phrog_1445 unknown function unknown function -1 49062 49223
YP_008857966.1 NC_022973_p29 integrase phrog_95 integrase integration and excision -1 24193 25686
YP_008857944.1 NC_022973_p7 LysB phrog_102 endolysin lysis 1 5173 5982
YP_008857957.1 NC_022973_p20 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 14271 14651
YP_008857987.1 NC_022973_p50 hypothetical protein phrog_5242 unknown function unknown function -1 37163 37429
YP_008857973.1 NC_022973_p36 hypothetical protein phrog_2650 unknown function unknown function -1 28039 28482
YP_008857964.1 NC_022973_p27 hypothetical protein phrog_2683 minor tail protein tail 1 22450 23847
YP_008857969.1 NC_022973_p32 hypothetical protein phrog_6992 unknown function unknown function -1 26878 27051
YP_008858001.1 NC_022973_p64 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 40763 41569
YP_008857981.1 NC_022973_p44 hypothetical protein phrog_1454 unknown function unknown function -1 34569 34805
YP_008857954.1 NC_022973_p17 hypothetical protein phrog_123 tail terminator connector 1 12910 13317
YP_008857979.1 NC_022973_p42 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 32333 34402
YP_008857999.1 NC_022973_p62 hypothetical protein phrog_1498 unknown function unknown function -1 40216 40368
YP_008858019.1 NC_022973_p82 hypothetical protein phrog_3906 unknown function unknown function -1 47519 48352
YP_008857971.1 NC_022973_p34 hypothetical protein phrog_383 unknown function unknown function -1 27307 27768
YP_008857995.1 NC_022973_p58 EndoVII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39441 39899
YP_008857972.1 NC_022973_p35 hypothetical protein phrog_5282 unknown function unknown function -1 27758 28042
YP_008857976.1 NC_022973_p39 HTH domain protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 30743 30997
YP_008857988.1 NC_022973_p51 hypothetical protein phrog_5270 unknown function unknown function -1 37426 37716
YP_008858008.1 NC_022973_p71 hypothetical protein phrog_1178 unknown function unknown function -1 44354 44599
YP_008857962.1 NC_022973_p25 hypothetical protein phrog_981 minor tail protein tail 1 21834 22136
YP_008858012.1 NC_022973_p75 hypothetical protein phrog_5476 unknown function unknown function -1 45197 45538
YP_008858014.1 NC_022973_p77 hypothetical protein phrog_6186 unknown function unknown function -1 45752 46378
YP_008857953.1 NC_022973_p16 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 12497 12910
YP_008857955.1 NC_022973_p18 major tail protein phrog_117 major tail protein tail 1 13333 14160
YP_008858002.1 NC_022973_p65 hypothetical protein phrog_520 unknown function unknown function -1 41612 41863
YP_008857975.1 NC_022973_p38 hypothetical protein phrog_762 unknown function unknown function -1 30360 30746
YP_008857951.1 NC_022973_p14 hypothetical protein phrog_2348 unknown function unknown function 1 11995 12138
YP_008857985.1 NC_022973_p48 hypothetical protein phrog_1167 phosphofructokinase other -1 36283 36750
YP_008857938.1 NC_022973_p1 HNH protein phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 535 834
YP_008857994.1 NC_022973_p57 hypothetical protein phrog_4670 unknown function unknown function -1 39287 39421
YP_008857947.1 NC_022973_p10 capsid maturation protease phrog_193 head maturation protease head and packaging 1 9187 10026
YP_008857997.1 NC_022973_p60 hypothetical protein phrog_4539 unknown function unknown function -1 40045 40143
YP_008857945.1 NC_022973_p8 terminase large subunit phrog_9 terminase large subunit head and packaging 1 5979 7757
YP_008858003.1 NC_022973_p66 hypothetical protein phrog_642 unknown function unknown function -1 41838 42140
YP_008857942.1 NC_022973_p5 hypothetical protein phrog_356 minor tail protein tail 1 3447 4088
YP_008857965.1 NC_022973_p28 hypothetical protein phrog_2235 minor tail protein tail 1 23857 24141
YP_008857959.1 NC_022973_p22 minor tail protein phrog_106 minor tail protein tail 1 18474 19487
YP_008858013.1 NC_022973_p76 hypothetical protein phrog_6649 unknown function unknown function -1 45535 45741
YP_008857991.1 NC_022973_p54 hypothetical protein phrog_5993 unknown function unknown function -1 38594 38851
YP_008857977.1 NC_022973_p40 ThyX phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 30999 31718
YP_008857949.1 NC_022973_p12 major capsid protein phrog_10 major head protein head and packaging 1 10617 11546
YP_008857956.1 NC_022973_p19 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 14271 15064
YP_008858017.1 NC_022973_p80 ArdA-like protein phrog_2059 anti-restriction protein moron, auxiliary metabolic gene and host takeover -1 46654 47169
YP_008857983.1 NC_022973_p46 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 34893 35519
YP_008857993.1 NC_022973_p56 hypothetical protein phrog_10096 unknown function unknown function -1 39066 39290
YP_008858018.1 NC_022973_p81 hypothetical protein phrog_5927 unknown function unknown function -1 47187 47402
YP_008858006.1 NC_022973_p69 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 43263 43793
YP_008857940.1 NC_022973_p3 hypothetical protein phrog_1260 minor tail protein tail 1 1427 2389