Genomic map of Pseudomonas phage CHA_P1 (NC_022974)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022974
Definition
Pseudomonas phage CHA_P1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Nankokuvirus.
DB of origin
REFSEQ
Length
88255
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
166
%GC
54.62
Number of singletons
1
Number of paralogs
12

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008858031.1 NC_022974_p8 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 6189 6656
YP_008858146.1 NC_022974_p123 hypothetical protein phrog_10312 unknown function unknown function 1 67783 68007
YP_008858119.1 NC_022974_p96 hypothetical protein phrog_15407 unknown function unknown function 1 56049 56408
YP_008858093.1 NC_022974_p70 ribonucleotide reductase of class Ia (aerobic) beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 45625 46644
YP_008858126.1 NC_022974_p103 hypothetical protein phrog_5680 unknown function unknown function 1 59369 59884
YP_008858137.1 NC_022974_p114 hypothetical protein phrog_2176 unknown function unknown function 1 63698 64129
YP_008858116.1 NC_022974_p93 hypothetical protein phrog_12054 unknown function unknown function 1 54761 55039
YP_008858129.1 NC_022974_p106 hypothetical protein phrog_18800 unknown function unknown function 1 60550 60804
YP_008858074.1 NC_022974_p51 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 33301 35958
YP_008858045.1 NC_022974_p22 hypothetical protein phrog_120 baseplate wedge subunit tail 1 16304 16669
YP_008858186.1 NC_022974_p163 hypothetical protein phrog_13098 unknown function unknown function 1 85220 85468
YP_008858159.1 NC_022974_p136 hypothetical protein phrog_20444 unknown function unknown function 1 72731 73099
YP_008858107.1 NC_022974_p84 hypothetical protein phrog_13123 unknown function unknown function 1 51659 51862
YP_008858183.1 NC_022974_p160 hypothetical protein phrog_12276 unknown function unknown function -1 83822 84382
YP_008858058.1 NC_022974_p35 hypothetical protein phrog_12496 unknown function unknown function 1 24945 25364
YP_008858168.1 NC_022974_p145 hypothetical protein phrog_11756 unknown function unknown function -1 75956 76162
YP_008858027.1 NC_022974_p4 hypothetical protein phrog_4103 unknown function unknown function 1 3328 4215
YP_008858134.1 NC_022974_p111 hypothetical protein phrog_27376 unknown function unknown function -1 62480 62620
YP_008858087.1 NC_022974_p64 hypothetical protein phrog_12364 unknown function unknown function 1 41444 41668
YP_008858128.1 NC_022974_p105 hypothetical protein phrog_5746 unknown function unknown function 1 60181 60468
YP_008858182.1 NC_022974_p159 hypothetical protein phrog_11910 unknown function unknown function -1 83427 83825
YP_008858055.1 NC_022974_p32 hypothetical protein phrog_4172 unknown function unknown function 1 24234 24533
YP_008858147.1 NC_022974_p124 hypothetical protein phrog_2614 unknown function unknown function 1 67994 68308
YP_008858167.1 NC_022974_p144 hypothetical protein phrog_1040 peptidase HslV family other -1 75531 75959
YP_008858117.1 NC_022974_p94 hypothetical protein phrog_17916 unknown function unknown function 1 55163 55399
YP_008858037.1 NC_022974_p14 hypothetical protein phrog_280 virion structural protein head and packaging 1 10060 10563
YP_008858033.1 NC_022974_p10 hypothetical protein phrog_4087 unknown function unknown function 1 7027 7647
YP_008858113.1 NC_022974_p90 hypothetical protein phrog_12567 unknown function unknown function 1 53860 54171
YP_008858144.1 NC_022974_p121 hypothetical protein phrog_2176 unknown function unknown function 1 66753 67433
YP_008858172.1 NC_022974_p149 hypothetical protein phrog_3360 unknown function unknown function -1 78164 78649
YP_008858138.1 NC_022974_p115 hypothetical protein phrog_2176 unknown function unknown function 1 64122 64460
YP_008858103.1 NC_022974_p80 hypothetical protein phrog_12731 unknown function unknown function 1 49711 50190
YP_008858041.1 NC_022974_p18 hypothetical protein phrog_817 tail fiber protein tail 1 13528 14295
YP_008858053.1 NC_022974_p30 hypothetical protein phrog_4349 Rz-like spanin lysis 1 23668 24084
YP_008858090.1 NC_022974_p67 hypothetical protein phrog_3506 thymidylate synthase DNA, RNA and nucleotide metabolism 1 42985 43359
YP_008858035.1 NC_022974_p12 hypothetical protein phrog_280 virion structural protein head and packaging 1 8983 9504
YP_008858025.1 NC_022974_p2 hypothetical protein phrog_113 portal protein head and packaging 1 1430 2917
YP_008858077.1 NC_022974_p54 hypothetical protein phrog_2544 unknown function unknown function 1 36581 37474
YP_008858051.1 NC_022974_p28 hypothetical protein phrog_2860 endolysin head and packaging 1 22861 23424
YP_008858185.1 NC_022974_p162 hypothetical protein phrog_3900 unknown function unknown function 1 84862 85218
YP_008858101.1 NC_022974_p78 hypothetical protein phrog_12962 unknown function unknown function 1 48997 49164
YP_008858043.1 NC_022974_p20 hypothetical protein phrog_196 baseplate hub tail 1 14661 15542
YP_008858140.1 NC_022974_p117 hypothetical protein phrog_2176 unknown function unknown function 1 64811 65173
YP_008858095.1 NC_022974_p72 hypothetical protein phrog_12627 unknown function unknown function 1 47177 47440
YP_008858133.1 NC_022974_p110 hypothetical protein phrog_11252 unknown function unknown function -1 62122 62319
YP_008858136.1 NC_022974_p113 hypothetical protein phrog_27376 unknown function unknown function -1 63234 63374
YP_008858157.1 NC_022974_p134 hypothetical protein phrog_7635 unknown function unknown function 1 72344 72601
YP_008858154.1 NC_022974_p131 hypothetical protein phrog_16719 unknown function unknown function 1 71113 71307
YP_008858036.1 NC_022974_p13 hypothetical protein phrog_280 virion structural protein head and packaging 1 9557 10060
YP_008858052.1 NC_022974_p29 hypothetical protein phrog_12175 unknown function unknown function 1 23405 23671
YP_008858086.1 NC_022974_p63 hypothetical protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 40473 41390
YP_008858056.1 NC_022974_p33 hypothetical protein phrog_3899 unknown function unknown function 1 24549 24836
YP_008858166.1 NC_022974_p143 hypothetical protein phrog_10306 unknown function unknown function -1 75205 75540
YP_008858151.1 NC_022974_p128 hypothetical protein phrog_3483 unknown function unknown function 1 70067 70579
YP_008858071.1 NC_022974_p48 hypothetical protein phrog_12927 unknown function unknown function 1 30477 31013
YP_008858092.1 NC_022974_p69 hypothetical protein phrog_11821 unknown function unknown function 1 45218 45583
YP_008858142.1 NC_022974_p119 hypothetical protein phrog_3483 unknown function unknown function 1 65501 66403
YP_008858065.1 NC_022974_p42 hypothetical protein phrog_200 lipoprotein other 1 27053 27904
YP_008858096.1 NC_022974_p73 hypothetical protein phrog_2251 unknown function unknown function 1 47433 47663
YP_008858048.1 NC_022974_p25 hypothetical protein phrog_2282 tail fiber protein tail 1 18912 20933
YP_008858049.1 NC_022974_p26 hypothetical protein phrog_4628 tail fiber assembly tail 1 20979 21356
YP_008858123.1 NC_022974_p100 hypothetical protein phrog_4273 unknown function unknown function 1 57925 58431
YP_008858068.1 NC_022974_p45 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 28639 29859
YP_008858148.1 NC_022974_p125 hypothetical protein phrog_9984 unknown function unknown function 1 68367 68756
YP_008858089.1 NC_022974_p66 hypothetical protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 42082 42981
YP_008858088.1 NC_022974_p65 hypothetical protein phrog_4521 unknown function unknown function 1 41665 42078
YP_008858160.1 NC_022974_p137 hypothetical protein phrog_18236 unknown function unknown function 1 73107 73370
YP_008858084.1 NC_022974_p61 hypothetical protein phrog_1985 HNH endonuclease DNA, RNA and nucleotide metabolism 1 39688 40251
YP_008858091.1 NC_022974_p68 ribonucleotide reductase of class Ia (aerobic) alpha subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 43352 45208
YP_008858094.1 NC_022974_p71 hypothetical protein phrog_1106 unknown function unknown function 1 46705 47187
YP_008858187.1 NC_022974_p164 hypothetical protein phrog_11136 unknown function unknown function 1 85673 85975
YP_008858155.1 NC_022974_p132 hypothetical protein phrog_4029 unknown function unknown function 1 71304 71780
YP_008858060.1 NC_022974_p37 hypothetical protein phrog_14224 unknown function unknown function 1 25594 25971
YP_008858139.1 NC_022974_p116 hypothetical protein phrog_2176 unknown function unknown function 1 64450 64824
YP_008858070.1 NC_022974_p47 hypothetical protein phrog_13021 unknown function unknown function 1 30095 30490
YP_008858135.1 NC_022974_p112 hypothetical protein phrog_11252 unknown function unknown function -1 62876 63073
YP_008858106.1 NC_022974_p83 hypothetical protein singleton unknown function unknown function 1 51368 51514
YP_008858141.1 NC_022974_p118 hypothetical protein phrog_2176 unknown function unknown function 1 65160 65504
YP_008858032.1 NC_022974_p9 hypothetical protein phrog_939 head protein head and packaging 1 6656 7027
YP_008858177.1 NC_022974_p154 hypothetical protein phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 80633 81904
YP_008858122.1 NC_022974_p99 hypothetical protein phrog_11104 unknown function unknown function 1 57307 57840
YP_008858153.1 NC_022974_p130 hypothetical protein phrog_15269 unknown function unknown function 1 70896 71120
YP_008858120.1 NC_022974_p97 hypothetical protein phrog_15160 unknown function unknown function 1 56434 56901
YP_008858044.1 NC_022974_p21 hypothetical protein phrog_11 baseplate spike tail 1 15539 16297
YP_008858029.1 NC_022974_p6 major capsid protein phrog_29 major head protein head and packaging 1 4617 5672
YP_008858175.1 NC_022974_p152 cell wall hydrolase domain protein phrog_938 endolysin lysis -1 79461 80024
YP_008858030.1 NC_022974_p7 hypothetical protein phrog_1732 unknown function unknown function 1 5726 6211
YP_008858149.1 NC_022974_p126 hypothetical protein phrog_3956 unknown function unknown function 1 68756 69778
YP_008858109.1 NC_022974_p86 hypothetical protein phrog_9396 unknown function unknown function 1 52567 52965
YP_008858057.1 NC_022974_p34 hypothetical protein phrog_26498 unknown function unknown function 1 24833 24952
YP_008858097.1 NC_022974_p74 hypothetical protein phrog_10949 unknown function unknown function 1 47665 47898
YP_008858072.1 NC_022974_p49 hypothetical protein phrog_11998 unknown function unknown function 1 31013 31279
YP_008858174.1 NC_022974_p151 hypothetical protein phrog_11519 unknown function unknown function -1 79203 79451
YP_008858067.1 NC_022974_p44 hypothetical protein phrog_9905 unknown function unknown function 1 28275 28646
YP_008858125.1 NC_022974_p102 hypothetical protein phrog_18797 unknown function unknown function 1 58907 59296
YP_008858026.1 NC_022974_p3 hypothetical protein phrog_1530 DNA methyltransferase other 1 2919 3335
YP_008858062.1 NC_022974_p39 hypothetical protein phrog_14175 unknown function unknown function 1 26201 26401
YP_008858115.1 NC_022974_p92 hypothetical protein phrog_4025 unknown function unknown function 1 54523 54759
YP_008858184.1 NC_022974_p161 hypothetical protein phrog_23358 unknown function unknown function 1 84575 84751
YP_008858098.1 NC_022974_p75 hypothetical protein phrog_11258 unknown function unknown function 1 47959 48513
YP_008858105.1 NC_022974_p82 hypothetical protein phrog_5201 unknown function unknown function 1 51087 51356
YP_008858061.1 NC_022974_p38 hypothetical protein phrog_16562 unknown function unknown function 1 25977 26198
YP_008858108.1 NC_022974_p85 hypothetical protein phrog_12189 unknown function unknown function 1 51938 52486
YP_008858059.1 NC_022974_p36 hypothetical protein phrog_12190 unknown function unknown function 1 25388 25597
YP_008858189.1 NC_022974_p166 hypothetical protein phrog_1954 virion structural protein head and packaging 1 87749 88174
YP_008858132.1 NC_022974_p109 hypothetical protein phrog_4686 unknown function unknown function 1 61400 61624
YP_008858114.1 NC_022974_p91 hypothetical protein phrog_13058 unknown function unknown function 1 54260 54523
YP_008858066.1 NC_022974_p43 hypothetical protein phrog_13454 unknown function unknown function 1 27953 28273
YP_008858165.1 NC_022974_p142 hypothetical protein phrog_10673 unknown function unknown function -1 74972 75208
YP_008858188.1 NC_022974_p165 hypothetical protein phrog_15848 terminase large subunit head and packaging 1 86858 87676
YP_008858111.1 NC_022974_p88 hypothetical protein phrog_12996 unknown function unknown function 1 53446 53559
YP_008858121.1 NC_022974_p98 hypothetical protein phrog_6091 unknown function unknown function 1 56985 57230
YP_008858171.1 NC_022974_p148 DNA helicase phrog_1967 DNA helicase DNA, RNA and nucleotide metabolism -1 76624 78186
YP_008858152.1 NC_022974_p129 hypothetical protein phrog_343 unknown function unknown function 1 70572 70895
YP_008858046.1 NC_022974_p23 hypothetical protein phrog_6 baseplate wedge subunit tail 1 16670 18136
YP_008858158.1 NC_022974_p135 hypothetical protein phrog_5604 unknown function unknown function 1 72585 72734
YP_008858034.1 NC_022974_p11 hypothetical protein phrog_205 tail sheath tail 1 7650 8972
YP_008858042.1 NC_022974_p19 hypothetical protein phrog_349 virion structural protein head and packaging 1 14295 14660
YP_008858112.1 NC_022974_p89 hypothetical protein phrog_13320 unknown function unknown function 1 53660 53794
YP_008858040.1 NC_022974_p17 tape measure protein phrog_991 tail length tape measure protein tail 1 11195 13531
YP_008858064.1 NC_022974_p41 hypothetical protein phrog_13586 unknown function unknown function 1 26678 27043
YP_008858100.1 NC_022974_p77 hypothetical protein phrog_12479 unknown function unknown function 1 48677 48997
YP_008858063.1 NC_022974_p40 hypothetical protein phrog_4794 unknown function unknown function 1 26412 26678
YP_008858178.1 NC_022974_p155 hypothetical protein phrog_5276 unknown function unknown function -1 81917 82189
YP_008858099.1 NC_022974_p76 hypothetical protein phrog_7860 unknown function unknown function 1 48494 48667
YP_008858163.1 NC_022974_p140 hypothetical protein phrog_10597 unknown function unknown function -1 74219 74398
YP_008858118.1 NC_022974_p95 hypothetical protein phrog_15314 unknown function unknown function 1 55547 56038
YP_008858127.1 NC_022974_p104 hypothetical protein phrog_16815 unknown function unknown function 1 59954 60136
YP_008858176.1 NC_022974_p153 hypothetical protein phrog_2686 unknown function unknown function -1 80079 80573
YP_008858079.1 NC_022974_p56 hypothetical protein phrog_12381 unknown function unknown function 1 37728 38003
YP_008858081.1 NC_022974_p58 hypothetical protein phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 38281 39369
YP_008858039.1 NC_022974_p16 hypothetical protein phrog_4625 unknown function unknown function 1 10984 11205
YP_008858110.1 NC_022974_p87 hypothetical protein phrog_12145 unknown function unknown function 1 53032 53421
YP_008858102.1 NC_022974_p79 hypothetical protein phrog_11943 unknown function unknown function 1 49217 49714
YP_008858076.1 NC_022974_p53 hypothetical protein phrog_12310 unknown function unknown function 1 36328 36513
YP_008858078.1 NC_022974_p55 hypothetical protein phrog_7018 unknown function unknown function 1 37533 37727
YP_008858069.1 NC_022974_p46 hypothetical protein phrog_13122 unknown function unknown function 1 29869 30054
YP_008858080.1 NC_022974_p57 hypothetical protein phrog_7029 unknown function unknown function 1 38015 38281
YP_008858161.1 NC_022974_p138 hypothetical protein phrog_13737 unknown function unknown function -1 73639 73869
YP_008858130.1 NC_022974_p107 hypothetical protein phrog_9686 unknown function unknown function 1 60982 61143
YP_008858073.1 NC_022974_p50 hypothetical protein phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 31328 33280
YP_008858180.1 NC_022974_p157 hypothetical protein phrog_14132 unknown function unknown function -1 82605 83042
YP_008858150.1 NC_022974_p127 hypothetical protein phrog_8303 unknown function unknown function 1 69778 70023
YP_008858082.1 NC_022974_p59 hypothetical protein phrog_519 unknown function unknown function 1 39357 39518
YP_008858024.1 NC_022974_p1 phage terminase large subunit phrog_979 terminase large subunit head and packaging 1 1 1419
YP_008858156.1 NC_022974_p133 hypothetical protein phrog_3230 unknown function unknown function 1 71761 72261
YP_008858050.1 NC_022974_p27 hypothetical protein phrog_2282 tail fiber protein tail 1 21366 22859
YP_008858170.1 NC_022974_p147 hypothetical protein phrog_12439 unknown function unknown function -1 76349 76627
YP_008858181.1 NC_022974_p158 hypothetical protein phrog_3948 unknown function unknown function -1 83051 83317
YP_008858169.1 NC_022974_p146 hypothetical protein phrog_14060 unknown function unknown function -1 76171 76359
YP_008858038.1 NC_022974_p15 hypothetical protein phrog_1613 tail assembly chaperone tail 1 10577 10963
YP_008858028.1 NC_022974_p5 hypothetical protein phrog_49 head decoration head and packaging 1 4232 4606
YP_008858173.1 NC_022974_p150 hypothetical protein phrog_768 DprA-like DNA recombination-mediator protein DNA, RNA and nucleotide metabolism -1 78604 79206
YP_008858143.1 NC_022974_p120 hypothetical protein phrog_2176 unknown function unknown function 1 66400 66753
YP_008858162.1 NC_022974_p139 hypothetical protein phrog_10165 unknown function unknown function -1 73944 74222
YP_008858131.1 NC_022974_p108 hypothetical protein phrog_11866 unknown function unknown function 1 61192 61410
YP_008858104.1 NC_022974_p81 hypothetical protein phrog_11927 unknown function unknown function 1 50361 50573
YP_008858047.1 NC_022974_p24 hypothetical protein phrog_587 structural protein head and packaging 1 18138 18902
YP_008858083.1 NC_022974_p60 hypothetical protein phrog_12564 unknown function unknown function 1 39518 39691
YP_008858054.1 NC_022974_p31 hypothetical protein phrog_5388 Rz-like spanin lysis 1 24071 24253
YP_008858075.1 NC_022974_p52 hypothetical protein phrog_12101 unknown function unknown function 1 35975 36181
YP_008858085.1 NC_022974_p62 hypothetical protein phrog_12267 unknown function unknown function 1 40248 40463
YP_008858164.1 NC_022974_p141 hypothetical protein phrog_10851 unknown function unknown function -1 74395 74970
YP_008858145.1 NC_022974_p122 hypothetical protein phrog_10655 unknown function unknown function 1 67443 67790
YP_008858124.1 NC_022974_p101 hypothetical protein phrog_6605 unknown function unknown function 1 58669 58881
YP_008858179.1 NC_022974_p156 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 82192 82608